RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
JUN	3	-0.930	0.930			-0.126
BRCA1	2	0.200	-0.140	0.433			0.018	0.146
RCOR1	2	-1.890	3.100	0.185	-0.123	0.523	0.896	0.794
CDK9	2	-1.000	1.130	2.047	1.362	1.840	1.146	0.280
KMT2D	2	0.250	-0.290				-1.403	-0.404
KDM1A	1	-1.020	1.190				1.814	0.225
KDM1A	1	-1.020	1.190	0.355	0.031	0.593
FOXC1	1	-2.160	3.640	-1.217	-0.424	0.659
TFAP4	1	1.270	-0.790
TBL1Y	1	-1.630	3.050	0.090	-3.400	0.909	0.103	0.241
CTCF	1	-0.190	0.040	1.656	0.503	0.229	0.942	0.519
HOXA13	1	-1.850	3.840		-0.027	0.427
HOXA13	1	-1.850	3.840	-1.413				0.651
MSX2	1	-0.260	0.240
CTCFL	1	0.700	-1.150	1.656	0.503	0.229	0.942	0.519
JUND	1	0.270	0.190
TCF7L1	1	-2.040	2.970	-0.741
ZNF513	1	2.450	-1.420
BASP1	1	2.550	-1.210
TAF7	1	0.270	-0.210
CREB3L2	1	-2.290	4.300
RNF10	0	0.380	-0.140
TAF2	0	-0.530	1.000				0.642	0.344
HDAC4	0	1.730	-0.740
TCF3	0	0.270	-0.020
SREBF1	0	0.540	-0.490
SREBF1	0	0.540	-0.490
XRCC5	0	1.940	-0.800	0.205	-0.587	0.234	-0.176	0.162
RFX3	0	1.310	-0.470	-1.319			0.299	0.084
RFX3	0	1.310	-0.470
SMARCA2	0	-0.270	0.240	-0.431	-0.133	0.253	0.069	-0.280
TCF7	0	1.040	-0.330	-0.741
MEF2C	0	-0.980	1.550
MEF2C	0	-0.980	1.550
REST	0	-0.120	-0.050	-0.002	-1.235	-0.636
HIF1A	0	-0.480	0.400
YY1	0	-0.370	0.560	0.179	0.557	0.050	-0.096	0.076
NFATC2	0	-0.090	0.320
TBL1X	0	-0.240	-0.140	0.090	-3.400	0.909	0.103	0.241
GABPB1	0	-0.410	0.300
HNRNPL	0	-0.170	0.370	-0.430	-0.816	-0.279	-0.040	0.131
DLX5	0	-0.590	0.650		-1.286	0.204
AHR	0	-1.080	1.020
GATA3	0	0.000	-0.660
HDAC5	0	-0.830	1.270
NFKB1	0	0.720	-0.810
SOX6	0	1.430	-0.800
TFEB	0	0.270	0.450
TBP	0	1.610	-1.170	-0.831
WNT5A	0
RBBP5	0	-0.150	-0.170	0.443	0.219	0.902	0.167	0.464
PROX1	0	0.800	-0.550
ZNF639	0	-0.250	-0.510		-0.298	0.605
RUNX2	0
IRF3	0	-0.190	-0.050
SIX1	0	1.730	-1.230		-0.334	0.495
CCNT1	0	0.720	-0.430				1.355	1.434
FOXA1	0	1.190	-0.010
ASH2L	0	-0.380	-0.020	0.463	-0.135	0.610	0.279	0.403
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
SOX5	0	-0.800	0.810
NKX2-1	0	-0.730	0.480		0.174	0.236
NKX2-1	0	-0.730	0.480				-0.123
GATA4	0	-0.670	0.350
CDK5RAP2	0	-0.900	1.740				-0.181	0.284
ARRB1	0	0.960	-0.620
YAP1	0	1.010	-0.370
LEF1	0	-0.710	0.790	-0.741
TCF12	0	0.940	-0.150
ZFHX3	0	-0.200	0.390				-0.903	-0.394
NCOR1	0	-0.820	1.130	-0.827			-0.215	0.037
GATA6	0	-0.210	-0.020	-0.027			-0.582	-0.834
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
CBX4	0	0.230	0.160				0.798	0.323
SMAD4	0	0.420	-0.390		0.020	0.556		-0.485
CARM1	0	-0.160	0.540	-0.032
TAF1	0						0.381	0.385
TCF7L2	0	-0.550	0.790	-0.741
TAF5	0	1.390	-1.390	-2.311	0.004	0.398	1.017	0.674
MTA2	0	-1.360	1.910	0.507	0.478	0.899	0.023	0.072
ARID5B	0	0.580	-0.330
GABPA	0	-0.400	0.630
GABPA	0	-0.350	1.120
MTERF3	0	0.910	-0.750		0.248	0.419
GFI1	0	0.150	0.340
ZNF281	0	1.890	-0.960
ZNF281	0	1.890	-0.960		-1.258	0.818	1.187	-0.499
HMGB2	0	-0.350	0.170			-1.810	0.655	0.285
HAND2	0	0.000	0.600
BRD7	0	0.610	-0.560		0.433		0.833	0.498
SMAD3	0	-1.560	1.800
SMAD3	0	0.270	-0.340
PHB	0	-1.260	1.640	-0.429	0.649	-1.697
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
STAT3	0	0.200	-1.270					0.334
PINX1	0						-0.245	0.016
SOX7	0	0.510	-0.520				-0.245	0.016
ZNF217	0	1.060	-0.310
RELA	0	-1.130	1.600	0.793
FOXG1	0	-0.510	1.000	-1.217	-0.424	0.659
FOXG1	0	0.550	-0.250	-1.217	-0.424	0.659
TBL1XR1	0	-0.370	0.750	0.090	-3.400	0.909	0.103	0.241
ERBB4	0
ERBB4	0
SOX2	0	-0.250	0.870
NKX2-5	0	-0.150	1.230		0.174	0.236
NKX2-5	0	-0.150	1.230				-0.123
BCOR	0	-0.620	1.340	0.006	-0.709	0.270	-1.186	-0.601
SP1	0			0.404			0.333	0.650
XRCC6	0	0.960	-0.800
XRCC6	0	0.960	-0.800	-0.089	-0.758	0.145	0.033	0.140
ZNF335	0	1.750	-1.310
SREBF2	0	0.120	-0.140
ETV5	0	-0.820	1.770

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AHR	Ubiquitylation	K641		-1.506	_QVVVEPQQQLCQK(gl)MK_
ARID5B	Phosphorylation	S264	0.496	0.623	_RDS(ph)FSGVK_
ARRB1	Phosphorylation	S412	0.138	0.253	_GMKDDKEEEEDGTGS(ph)PQLNNR_
BASP1	Ubiquitylation	K18	1.496	0.636	_GYNVNDEK(gl)AKEK_
BASP1	Ubiquitylation	K20	0.964	0.789	_GYNVNDEKAK(gl)_
BASP1	Ubiquitylation	K22	0.978		_GYNVNDEKAKEK(gl)_
BASP1	Phosphorylation	T36	-0.229	-0.041	_KAEGAATEEEGT(ph)PKESEPQAAAEPAEAK_
BASP1	Ubiquitylation	K52	0.100	-1.026	_ESEPQAAAEPAEAK(gl)EGK_
BASP1	Ubiquitylation	K163	-2.086		_KTEAPAAPAAQETK(gl)SDGAPASDSKPGSSEAAPSSK_
BASP1	Phosphorylation	S164	-0.762	0.038	_S(ph)DGAPASDSKPGSSEAAPSSK_
BASP1	Ubiquitylation	K173	-0.916	-0.418	_SDGAPASDSK(gl)PGSSEAAPSSK_
BASP1	Ubiquitylation	K184	-2.030	-2.479	_SDGAPASDSKPGSSEAAPSSK(gl)ETPAATEAPSSTPK_
BASP1	Phosphorylation	S194		-0.841	_ETPAATEAPS(ph)STPK_
BASP1	Phosphorylation	T196		-0.654	_ETPAATEAPSST(ph)PK_
BASP1	Ubiquitylation	K226	-0.819		_AQGPAASAEEPKPVEAPAANSDQTVTVK(gl)E_
BCOR	Ubiquitylation	K40		-0.709	_ILVNDGDASK(gl)AR_
BCOR	Phosphorylation	S422	-0.216	-0.108	_KDGS(ph)SPPLLEK_
BCOR	Phosphorylation	S423	-0.363	-0.255	_DGSS(ph)PPLLEK_
BCOR	Ubiquitylation	K530		1.176	_SMSLKNK(gl)_
BCOR	Phosphorylation	S1127		-1.150	_QPVSEPPADQVASDMPHS(ph)PTLR_
BCOR	Phosphorylation	T1129		0.299	_QPVSEPPADQVASDMPHS(ph)PTLR_
BCOR	Phosphorylation	S1139	-0.208	-0.116	_KVS(ph)GDSSHTETTAEEVPEDPLLK_
BCOR	Phosphorylation	S1142	0.092		_RKVSGDS(ph)SHTETTAEEVPEDPLLK_
BCOR	Phosphorylation	T1148	-0.101	0.000	_RKVSGDSSHTETT(ph)AEEVPEDPLLK_
BCOR	Phosphorylation	S1290		-0.318	_SWSEESLKPSDNEQGLPVFSGS(ph)PPMK_
BCOR	Phosphorylation	S1410		-0.698	_KRPEPSSDYDLS(ph)PAK_
BCOR	Ubiquitylation	K1460	0.227	0.495	_RLIVNK(gl)NAGETLLQR_
BRCA1	Phosphorylation	S123	0.465	0.445	_KENNSPEHLKDEVS(ph)IIQSM(ox)GYR_
BRCA1	Phosphorylation	S753	2.662	4.077	_VSNNAEDPKDLMLS(ph)GER_
BRCA1	Phosphorylation	S1009	0.733	1.028	_KNLLEENFEEHSM(ox)S(ph)PER_
BRCA1	Phosphorylation	S1546	1.821	2.105	_NYPS(ph)QEELIK_
BRCA1	Phosphorylation	S1564		3.065	_VVDVEEQQLEES(ph)GPHDLTETSYLPR_
BRCA1	Phosphorylation	S1664		1.120	_EKPELTAS(ph)TER_
BRD7	Phosphorylation	S279	0.963	0.918	_EREDS(ph)GDAEAHAFK_
BRD7	Phosphorylation	S621		-0.540	_AM(ox)GISIPS(ph)PVMENNFVDLTEDTEEPK_
CBX4	Phosphorylation	S291	0.263	0.125	_SGEVAEGEARS(ph)PSHKK_
CBX4	Phosphorylation	S293		0.227	_SGEVAEGEARSPS(ph)HKK_
CDK5RAP2	Ubiquitylation	K489	-0.006		_HLTESTNQK(gl)DVLLQK_
CDK5RAP2	Phosphorylation	S697		-0.007	_LAS(ph)T(ph)EQTELLASK_
CDK5RAP2	Phosphorylation	T698		-0.007	_LAS(ph)T(ph)EQTELLASK_
CDK5RAP2	Ubiquitylation	K943		-0.252	_SRLPILIK(gl)_
CDK5RAP2	Phosphorylation	S1074	1.217	0.953	_ENPEDVLS(ph)PTSVATYLSSK_
CDK5RAP2	Phosphorylation	S1238	0.477	0.111	_DLS(ph)PPRYDSLVQSQAR_
CDK5RAP2	Phosphorylation	S1350	-1.016	-0.606	_IEEDNLTYQHLLPES(ph)PEPSASHALSDYETSEK_
CDK5RAP2	Phosphorylation	T1885		-0.869	_GNLELRPGGAHPGT(ph)CSPSRPGS_
CDK5RAP2	Phosphorylation	S1887	-0.612	-1.053	_GNLELRPGGAHPGTCS(ph)PSRPGS_
CDK5RAP2	Phosphorylation	S1889		-0.312	_GNLELRPGGAHPGTCSPS(ph)RPGS_
CDK9	Ubiquitylation	K35		-0.042	_IGQGTFGEVFK(gl)AR_
CDK9	Ubiquitylation	K151		-0.345	_DMK(gl)AANVLITR_
CDK9	Ubiquitylation	K178	-0.409	-1.058	_AFSLAK(gl)NSQPNR_
CDK9	Ubiquitylation	K269		-1.874	_LELVK(gl)GQK_
CREB3L2	Ubiquitylation	K364		-0.016	_LQTLVMGK(gl)VSR_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DLX5	Phosphorylation	S225		-0.821	_SGEIPSEQHPGAS(ph)AS(ph)PPCASPPVSAPASWDFGVPQR_
DLX5	Phosphorylation	S227		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DLX5	Phosphorylation	S232		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
ERBB4	Ubiquitylation	K714	0.078		_ILK(gl)ETELKR_
ERBB4	Ubiquitylation	K745	-0.474	0.342	_GIWVPEGETVK(gl)IPVAIK_
ERBB4	Ubiquitylation	K854	-0.859		_NVLVK(gl)SPNHVK_
ETV5	Phosphorylation	S136		-0.502	_RELHS(ph)PSSELSSCSHEQALGANYGEK_
FOXA1	Phosphorylation	S331	-0.760	-0.866	_TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK_
FOXC1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXC1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXC1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXC1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXC1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
FOXG1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXG1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXG1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXG1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXG1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
GABPA	Ubiquitylation	K359	-0.544	0.135	_LNQPELVAQK(gl)WGQR_
GABPB1	Ubiquitylation	K9	0.087		_K(gl)LLEAAR_
GATA3	Phosphorylation	S162	-1.195	-0.563	_DVS(ph)PDPSLSTPGSAGSAR_
GATA4	Phosphorylation	S109	-0.520	-0.425	_FS(ph)FPGTTGSLAAAAAAAAAR_
GATA4	Phosphorylation	S407	-0.185	0.124	_LS(ph)PQGYASPVSQSPQTSSK_
GFI1	Phosphorylation	S68	0.285	0.145	_DRLS(ph)PESQLTEAPDR_
HAND2	Ubiquitylation	K183	0.800	1.236	_K(gl)ELNEILK_
HDAC4	Phosphorylation	S265		-0.390	_RS(ph)SPLLR_
HDAC4	Phosphorylation	S266	-0.821	-0.598	_RSS(ph)PLLR_
HDAC4	Phosphorylation	S632	-1.146	-0.837	_AQS(ph)SPASATFPVSVQEPPTKPR_
HDAC5	Phosphorylation	S265		-0.390	_RS(ph)SPLLR_
HDAC5	Phosphorylation	S266	-0.821	-0.598	_RSS(ph)PLLR_
HIF1A	Ubiquitylation	K10		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K11		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K173		-0.662	_MK(gl)CTLTSR_
HIF1A	Ubiquitylation	K186		-0.590	_TMNIK(gl)SATWK_
HIF1A	Ubiquitylation	K252		-0.784	_HSLDM(ox)K(gl)FSYCDER_
HIF1A	Ubiquitylation	K371		-0.508	_PVESSDMK(gl)MTQLFTK_
HIF1A	Ubiquitylation	K378		-0.077	_MTQLFTK(gl)VESEDTSSLFDK_
HIF1A	Ubiquitylation	K390		-0.348	_VESEDTSSLFDK(gl)LKK_
HIF1A	Ubiquitylation	K392		-0.546	_VESEDTSSLFDKLK(gl)_
HIF1A	Ubiquitylation	K393		-0.451	_VESEDTSSLFDKLKK(gl)_
HIF1A	Ubiquitylation	K710		-1.696	_TTVPEEELNPK(gl)ILALQNAQR_
HMGB2	Ubiquitylation	K114	0.323		_IK(gl)SEHPGLSIGDTAK_
HMGB2	Ubiquitylation	K128	0.363		_K(gl)LGEMWSEQSAK_
HMGB2	Ubiquitylation	K147	0.205	-0.408	_DKQPYEQK(gl)AAK_
HMGB2	Ubiquitylation	K150	-0.251		_DKQPYEQKAAK(gl)_
HNRNPL	Ubiquitylation	K59	0.308		_YYGGGSEGGRAPK(gl)R_
HNRNPL	Ubiquitylation	K269	0.860	0.261	_IEYAK(gl)PTR_
HNRNPL	Ubiquitylation	K302	-0.616		_NDQDTWDYTNPNLSGQGDPGSNPNK(gl)R_
HNRNPL	Ubiquitylation	K455	-0.114		_LNVCVSK(gl)QPAIMPGQSYGLEDGSCSYK_
HNRNPL	Ubiquitylation	K493	1.062	0.580	_FSTPEQAAK(gl)NR_
HNRNPL	Ubiquitylation	K533	1.067		_RPSSVK(gl)VFSGK_
HNRNPL	Ubiquitylation	K538	-0.280	0.255	_VFSGK(gl)SER_
HOXA13	Ubiquitylation	K335	0.431	0.162	_VQLK(gl)ELER_
IRF3	Phosphorylation	S173	-0.663	-1.111	_S(ph)PSLDNPTPFPNLGPSENPLK_
IRF3	Phosphorylation	S175	-0.663	-0.661	_S(ph)PSLDNPTPFPNLGPSENPLKR_
IRF3	Ubiquitylation	K193	-3.309	-3.157	_SPSLDNPTPFPNLGPSENPLK(gl)R_
JUN	Phosphorylation	S58	-0.167	-1.247	_AKNS(ph)DLLTSPDVGLLK_
JUN	Phosphorylation	T62	2.545	1.674	_NSDLLT(ph)SPDVGLLK_
JUN	Phosphorylation	S63	2.030	1.458	_NSDLLTS(ph)PDVGLLK_
JUN	Ubiquitylation	K70	9.213		_NSDLLTSPDVGLLK(gl)_
JUN	Phosphorylation	S73	1.499	0.845	_LAS(ph)PELER_
JUN	Phosphorylation	S243	-0.642	-1.399	_LQALKEEPQTVPEMPGETPPLS(ph)PIDMESQER_
JUN	Ubiquitylation	K309	1.034	0.155	_EQVAQLK(gl)QK_
JUND	Phosphorylation	S90	2.088	1.448	_ADGAPSAAPPDGLLAS(ph)PDLGLLK_
JUND	Phosphorylation	S255	-1.629	-1.982	_LAALKDEPQTVPDVPSFGES(ph)PPLSPIDMDTQER_
JUND	Phosphorylation	S259		-0.855	_LAALKDEPQTVPDVPSFGESPPLS(ph)PIDMDTQER_
KDM1A	Phosphorylation	S69	-2.048	-2.645	_KEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR_
KDM1A	Phosphorylation	T88	-1.832		_KEPPRASPPGGLAEPPGSAGPQAGPT(ph)VVPGSATPM(ox)ETGIAETPEGR_
KDM1A	Phosphorylation	S126	0.780	0.501	_EMDES(ph)LANLSEDEYYS(ph)EEER_
KDM1A	Phosphorylation	S131	0.204	0.473	_EM(ox)DESLANLS(ph)EDEYYS(ph)EEER_
KDM1A	Phosphorylation	S137	0.122	0.511	_EM(ox)DESLANLS(ph)EDEYYS(ph)EEER_
KDM1A	Phosphorylation	S166	-2.328	-2.624	_KLPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR_
KDM1A	Ubiquitylation	K296	-0.820		_IKPLPTK(gl)K_
KDM1A	Ubiquitylation	K297	-0.820		_IKPLPTK(gl)K_
KDM1A	Ubiquitylation	K507	-1.073		_DITAEFLVKSK(gl)_
KMT2D	Phosphorylation	S373	-0.031		_FS(ph)PPEPGDTPTDEPDALYVACQGQPK_
KMT2D	Phosphorylation	T1261		0.575	_LCT(ph)DSLPETDDSLLCDAGTAISGGK_
KMT2D	Ubiquitylation	K1610	-0.606		_NLTM(ox)SPLHK(gl)R_
KMT2D	Phosphorylation	S1671	-0.219	-0.187	_LEGPVS(ph)PDVEPGKEETEESK_
KMT2D	Phosphorylation	T1843	-0.551	-0.988	_ADT(ph)PGPEDGGVK_
KMT2D	Phosphorylation	T1865	0.019	0.146	_ASPVPSDPEKPGT(ph)PGEGM(ox)LSSDLDR_
KMT2D	Phosphorylation	T2229	-0.146	-0.368	_PGAGQPGEFHTT(ph)PPGTPR_
KMT2D	Phosphorylation	S2239	0.516		_HQPS(ph)TPDPFLKPR_
KMT2D	Phosphorylation	T2240	0.562	-0.611	_HQPST(ph)PDPFLKPR_
KMT2D	Phosphorylation	S2274	-0.226	-0.352	_ASEPLLS(ph)PPPFGESR_
KMT2D	Phosphorylation	S2640	1.530	1.528	_SGITS(ph)PVEKR_
KMT2D	Phosphorylation	S3130	-0.430	-0.596	_VEEGGRHPS(ph)PCQFTIATPK_
KMT2D	Phosphorylation	S4359	0.300	0.037	_VS(ph)PAAAQLADTLFSK_
KMT2D	Phosphorylation	S4738	-0.391	-0.488	_ALS(ph)PVIPLIPR_
KMT2D	Phosphorylation	S4822	-0.518	0.106	_IPNSYEVLFPES(ph)PAR_
KMT2D	Phosphorylation	S4849	-0.135	2.378	_GLEGKS(ph)PDTGPDWLK_
LEF1	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
MEF2C	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2C	Phosphorylation	S240	0.008	0.302	_NS(ph)PGLLVSPGNLNK_
MEF2C	Phosphorylation	S406	0.272	0.338	_SEPVS(ph)PPRDR_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
MSX2	Phosphorylation	S3	-1.986	-1.774	_(ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S5	-1.986		_AS(ph)PS(ph)KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S63		3.351	_EAS(ph)PLPAESASAGATLRPLLLSGHGAR_
MSX2	Phosphorylation	S91	-0.783	-0.727	_EAHS(ph)PGPLVKPFETASVK_
MSX2	Phosphorylation	S123		-0.062	_SENSEDGAAWMQEPGRYS(ph)PPPR_
MTA2	Ubiquitylation	K32	0.007		_RIEELNK(gl)TANGNVEAK_
MTA2	Phosphorylation	S54	0.469	0.399	_DISSS(ph)LNSLADSNAR_
MTA2	Ubiquitylation	K71	0.012		_EFEEESK(gl)QPGVSEQQR_
MTA2	Ubiquitylation	K152	0.194	0.043	_VGCK(gl)YQAEIPDRLVEGESDNR_
MTA2	Ubiquitylation	K173	-0.127		_LVEGESDNRNQQK(gl)MEMK_
MTA2	Ubiquitylation	K177	-0.885		_MEMK(gl)VWDPDNPLTDR_
MTA2	Ubiquitylation	K320	0.565		_TTDRYIQQK(gl)R_
MTA2	Ubiquitylation	K405	-0.377		_YGGLK(gl)TPTQLEGATR_
MTA2	Phosphorylation	S435		-0.289	_GHLSRPEAQSLS(ph)PYTTSANR_
MTA2	Ubiquitylation	K508	-0.512		_TPLK(gl)IHPLVR_
MTA2	Ubiquitylation	K531	-0.796		_DLVAQAPLK(gl)PK_
MTA2	Phosphorylation	T534		-0.765	_DLVAQAPLKPKT(ph)PR_
MTA2	Ubiquitylation	K559	0.516		_GLGGIMVK(gl)R_
MTA2	Ubiquitylation	K611	-1.680		_LNPADAPNPVVFVATK(gl)DTR_
NCOR1	Phosphorylation	S1195	-0.029	0.716	_MPIEDS(ph)SPEKGREEAASK_
NCOR1	Phosphorylation	S1196	0.087	0.141	_MPIEDSS(ph)PEKGR_
NCOR1	Phosphorylation	S1472	0.700	0.536	_AQLS(ph)PGIYDDTSAR_
NCOR1	Phosphorylation	S1977	-0.959	-0.974	_YETPSDAIEVIS(ph)PASSPAPPQEK_
NCOR1	Ubiquitylation	K1998		-2.086	_LQTYQPEVVK(gl)ANQAENDPTR_
NCOR1	Phosphorylation	S2120	0.148	0.154	_VS(ph)PENLVDK_
NCOR1	Phosphorylation	S2151	-1.006	-0.922	_SHVSSEPYEPIS(ph)PPQVPVVHEK_
NCOR1	Phosphorylation	S2184	0.120	0.226	_S(ph)PGSISYLPSFFTK_
NCOR1	Phosphorylation	S2187		0.396	_SPGS(ph)ISYLPSFFTK_
NFATC2	Phosphorylation	S53	-0.845	-1.099	_VAS(ph)PPSGPAYPDDVLDYGLKPYSPLASLSGEPPGR_
NFATC2	Phosphorylation	T325	-0.605	0.168	_T(ph)SPDPSPVSAAPSK_
NFATC2	Phosphorylation	S326	-0.605	0.168	_T(ph)SPDPSPVSAAPSK_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
PHB	Ubiquitylation	K83		-0.521	_NVPVITGSK(gl)DLQNVNITLR_
PHB	Ubiquitylation	K186		-0.124	_EFTEAVEAK(gl)QVAQQEAER_
PHB	Ubiquitylation	K202		0.125	_FVVEK(gl)AEQQKK_
PROX1	Phosphorylation	S511	0.460	0.502	_DRAS(ph)PESLDLTR_
RBBP5	Ubiquitylation	K157	-0.051		_DQNK(gl)VLVCPMK_
RBBP5	Ubiquitylation	K207	-0.452		_RGEYIYTGNAK(gl)GK_
RBBP5	Ubiquitylation	K209	-0.452		_RGEYIYTGNAK(gl)GK_
RCOR1	Phosphorylation	S124		0.641	_S(ph)QERDNLGMLVWSPNQNLSEAK_
RCOR1	Ubiquitylation	K156	1.766		_LDEYIAIAKEK(gl)_
RCOR1	Phosphorylation	S257		-0.356	_REREES(ph)EDELEEANGNNPIDIEVDQNK_
REST	Ubiquitylation	K280	0.406		_VYTCGK(gl)CNYFSDR_
REST	Phosphorylation	S864		-3.456	_ESVSTEDLSPPS(ph)PPLPK_
RFX3	Phosphorylation	S155	-0.079	0.160	_AS(ph)PATIEMAIETLQK_
RFX3	Phosphorylation	T164	0.082	-0.152	_PGHVSPLQLT(ph)NIQVPQQALPTQR_
RNF10	Ubiquitylation	K98		-2.198	_ELSYPK(gl)NESFNNQSR_
RNF10	Ubiquitylation	K130		-1.151	_GGGSSK(gl)LFSSSFNGGR_
RNF10	Ubiquitylation	K162	-0.792	-0.855	_AEFSPAQFSGPKK(gl)_
RNF10	Ubiquitylation	K362		-1.497	_LLLASK(gl)EQVLHR_
RUNX2	Phosphorylation	S96	0.504	-0.399	_RFS(ph)PPSSSLQPGK_
RUNX2	Ubiquitylation	K244	0.258		_NASAVMK(gl)NQVAR_
SIX1	Ubiquitylation	K53	0.475		_AK(gl)AVVAFHR_
SMAD3	Ubiquitylation	K13	-0.704		_(ac)SSILPFTPPIVK(gl)R_
SMARCA2	Phosphorylation	S329	-0.314	-0.351	_IS(ph)PIQKPQGLDPVEILQER_
SMARCA2	Ubiquitylation	K333	-1.365		_ISPIQK(gl)PQGLDPVEILQER_
SMARCA2	Ubiquitylation	K381	0.558	1.360	_ATVELK(gl)ALR_
SMARCA2	Ubiquitylation	K413	-0.238		_DTTLETALNSK(gl)AYKR_
SMARCA2	Phosphorylation	S1377	-0.887	-1.142	_GRPPAEKLS(ph)PNPPK_
SOX2	Phosphorylation	S251	0.157	-0.109	_SEASSS(ph)PPVVTSSSHSR_
SOX5	Phosphorylation	S21		0.635	_RPAS(ph)PYGEADGEVAMVTSR_
SOX5	Phosphorylation	S370		-0.512	_LPGIPQGNLGAAVS(ph)PTSIHTDK_
SOX6	Phosphorylation	S98	-0.827	-0.182	_NTSTS(ph)PHKPDEGSR_
SP1	Phosphorylation	S2	0.834	1.114	_(ac)S(ph)DQDHSMDEMTAVVK_
SP1	Phosphorylation	S7	0.586	0.217	_(ac)SDQDHS(ph)MDEMTAVVK_
SP1	Phosphorylation	S56	-0.154		_SSSTGSSSSTGGGGQES(ph)QPSPLALLAATCSR_
SP1	Phosphorylation	S59	-0.217	-0.135	_SSSTGSSSSTGGGGQESQPS(ph)PLALLAATCSR_
SREBF1	Ubiquitylation	K321		-0.637	_LAAGSK(gl)APASAQSR_
SREBF1	Ubiquitylation	K579	-1.649	0.673	_K(gl)QADLDLAR_
SREBF2	Ubiquitylation	K340		-0.521	_TTHNIIEK(gl)R_
SREBF2	Ubiquitylation	K386		-0.496	_YLQQVNHK(gl)LR_
SREBF2	Phosphorylation	S469		-0.456	_VKDEPDS(ph)PPVALGMVDR_
SREBF2	Ubiquitylation	K579	-1.649	0.673	_K(gl)QADLDLAR_
SREBF2	Ubiquitylation	K660		-0.584	_RATPATEAGFEDEAK(gl)TSAR_
SREBF2	Ubiquitylation	K778		-0.770	_SWSVK(gl)SAAK_
SREBF2	Ubiquitylation	K782		-0.435	_SAAK(gl)ESLYCAQR_
SREBF2	Ubiquitylation	K822		-1.768	_AIESLVKPQAKK(gl)_
SREBF2	Ubiquitylation	K865		-0.540	_SSVLK(gl)SALGPDIICR_
SREBF2	Ubiquitylation	K1067		-1.490	_TTQSTK(gl)HGEVDAWPGQR_
STAT3	Ubiquitylation	K177	0.957		_VVENLQDDFDFNYK(gl)TLK_
STAT3	Ubiquitylation	K180	1.179		_TLK(gl)SQGDMQDLNGNNQSVTR_
STAT3	Ubiquitylation	K244	0.262		_TLTDEELADWK(gl)R_
STAT3	Phosphorylation	T714		-0.338	_FICVT(ph)PTTCSNTIDLPMS(ph)PR_
STAT3	Phosphorylation	S727	-0.079	0.156	_FICVTPTTCSNTIDLPMS(ph)PR_
TAF1	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TAF2	Phosphorylation	S1184	0.809	0.599	_EKDKEPFTFS(ph)SPASGR_
TAF2	Phosphorylation	S1185	0.809		_EKDKEPFTFS(ph)SPASGR_
TAF5	Ubiquitylation	K318	0.476	0.385	_DSYQLLK(gl)R_
TAF7	Ubiquitylation	K40	-0.984	0.784	_AVQSGHVNLK(gl)DR_
TAF7	Phosphorylation	S171		1.574	_LLS(ph)TDAEAVSTR_
TAF7	Phosphorylation	S201	0.225	0.409	_EAENQGLDISS(ph)PGMSGHR_
TBL1X	Ubiquitylation	K102	-0.183		_DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBL1XR1	Ubiquitylation	K102	-0.183		_DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBL1Y	Ubiquitylation	K102	-0.183		_DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBP	Ubiquitylation	K181	-0.140	-0.577	_LDLK(gl)TIALR_
TBP	Ubiquitylation	K225		-0.596	_MVCTGAK(gl)SEEQSR_
TCF12	Phosphorylation	S385	-0.190	-0.444	_PGGQAPS(ph)SPSYENSLHSLQSR_
TCF12	Phosphorylation	S559	0.763	0.520	_TSS(ph)TNEDEDLNPEQK_
TCF3	Phosphorylation	S328	0.865	0.756	_AGAPGALS(ph)PSYDGGLHGLQSK_
TCF7	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TCF7L1	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TCF7L2	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TFAP4	Ubiquitylation	K114	1.008	2.315	_LLQQNTQLK(gl)R_
TFAP4	Phosphorylation	S123		0.832	_RFIQELSGS(ph)SPKR_
TFAP4	Phosphorylation	S124	0.584	0.494	_RFIQELSGSS(ph)PK_
TFEB	Phosphorylation	S541		-0.724	_KDLDLMLLDDSLLPLASDPLLSTMS(ph)PEASK_
TFEB	Phosphorylation	S555	0.499	0.811	_RSSFS(ph)MEEGDVL_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_
XRCC5	Ubiquitylation	K195	-0.495	-0.075	_LGGHGPSFPLK(gl)GITEQQK_
XRCC5	Ubiquitylation	K265	-0.577	0.489	_IAAYK(gl)SILQER_
XRCC5	Ubiquitylation	K282	0.763		_TWTVVDAK(gl)TLKK_
XRCC5	Ubiquitylation	K325	0.022	-0.122	_YGSDIVPFSK(gl)VDEEQMK_
XRCC5	Ubiquitylation	K332	-0.032	0.491	_VDEEQMK(gl)YK_
XRCC5	Ubiquitylation	K347	0.588	1.044	_CFSVLGFCK(gl)SSQVQR_
XRCC5	Ubiquitylation	K481	-1.648	0.087	_TDTLEDLFPTTK(gl)IPNPR_
XRCC5	Ubiquitylation	K532	0.343	-0.001	_SQIPLSK(gl)IK_
XRCC5	Ubiquitylation	K534	-0.146	0.207	_SQIPLSKIK(gl)_
XRCC5	Ubiquitylation	K543	0.666	0.157	_TLFPLIEAK(gl)KK_
XRCC5	Ubiquitylation	K544	0.165	0.157	_TLFPLIEAKK(gl)_
XRCC5	Ubiquitylation	K660	0.644	1.285	_FNNFLK(gl)ALQEK_
XRCC5	Ubiquitylation	K665	0.630	0.990	_ALQEK(gl)VEIK_
XRCC5	Ubiquitylation	K702	0.626	0.332	_EEASGSSVTAEEAK(gl)K_
XRCC5	Ubiquitylation	K703	0.743	0.332	_EEASGSSVTAEEAKK(gl)_
XRCC6	Phosphorylation	S27	0.932	0.873	_TEGDEEAEEEQEENLEAS(ph)GDYK_
XRCC6	Ubiquitylation	K114	-0.534	-0.728	_NIYVLQELDNPGAK(gl)R_
XRCC6	Ubiquitylation	K123		-0.756	_ILELDQFK(gl)GQQGQK_
XRCC6	Ubiquitylation	K129	0.079	-0.683	_ILELDQFKGQQGQK(gl)R_
XRCC6	Ubiquitylation	K182		-1.603	_IMLFTNEDNPHGNDSAK(gl)ASR_
XRCC6	Ubiquitylation	K282	-2.587		_ALK(gl)PPPIK_
XRCC6	Ubiquitylation	K287	-1.436	-2.286	_ALKPPPIK(gl)LYR_
XRCC6	Ubiquitylation	K299	-0.535	-0.792	_ETNEPVKTK(gl)TR_
XRCC6	Ubiquitylation	K317	-0.584	-0.964	_TFNTSTGGLLLPSDTK(gl)R_
XRCC6	Ubiquitylation	K331	-1.666		_QIILEK(gl)EETEELKR_
XRCC6	Ubiquitylation	K338	-1.479	-1.003	_QIILEKEETEELK(gl)R_
XRCC6	Ubiquitylation	K451	-1.713	-1.901	_MPFTEK(gl)IMATPEQVGK_
XRCC6	Phosphorylation	T455	-0.085	0.348	_IMAT(ph)PEQVGK_
XRCC6	Ubiquitylation	K461	0.239	-0.409	_IMATPEQVGK(gl)MK_
XRCC6	Ubiquitylation	K463	-0.609	-0.641	_MK(gl)AIVEK_
XRCC6	Ubiquitylation	K468	-1.302	-0.451	_AIVEK(gl)LR_
XRCC6	Phosphorylation	S475	1.136	0.167	_S(ph)DSFENPVLQQHFR_
XRCC6	Phosphorylation	S477	1.023	0.034	_SDS(ph)FENPVLQQHFR_
XRCC6	Ubiquitylation	K516		-1.089	_VEAMNK(gl)R_
XRCC6	Phosphorylation	S560	0.318	0.378	_VEYS(ph)EEELKTHISK_
XRCC6	Ubiquitylation	K565	0.021	-0.887	_VEYSEEELK(gl)THISK_
XRCC6	Ubiquitylation	K575	0.031	-0.121	_GTLGK(gl)FTVPMLK_
XRCC6	Ubiquitylation	K591	0.474	0.187	_AYGLK(gl)SGLK_
YAP1	Phosphorylation	S61	-0.064	0.017	_GDS(ph)ETDLEALFNAVMNPK_
YAP1	Phosphorylation	T63	-0.159	-0.257	_GDSET(ph)DLEALFNAVM(ox)NPK_
YAP1	Phosphorylation	T110		0.467	_QAST(ph)DAGTAGALTPQHVR_
YAP1	Phosphorylation	S127		-1.544	_AHS(ph)SPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR_
YAP1	Phosphorylation	S131	-1.256	-1.096	_AHSSPAS(ph)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR_
YAP1	Ubiquitylation	K315	-0.002		_LQQLQMEK(gl)ER_
YAP1	Ubiquitylation	K321	-1.043		_LK(gl)QQELLR_
YAP1	Ubiquitylation	K342	-0.589		_NINPSTANSPK(gl)CQELALR_
YAP1	Phosphorylation	S367		0.272	_SQLPTLEQDGGTQNPVSS(ph)PGMSQELR_
YAP1	Phosphorylation	S397	-0.200		_DES(ph)TDSGLSM(ox)SSYSVPR_
YY1	Phosphorylation	S247	0.269	0.058	_DIDHETVVEEQIIGENS(ph)PPDYSEYMTGK_
YY1	Ubiquitylation	K301	0.655	0.006	_TIACPHK(gl)GCTK_
YY1	Ubiquitylation	K339	0.205		_AFVESSK(gl)LKR_
ZFHX3	Phosphorylation	S425	-0.531	-0.563	_TPITSVPLGPLAS(ph)SPTK_
ZNF217	Phosphorylation	S407	-0.169	0.426	_AGAES(ph)PTMSVDGR_
ZNF281	Ubiquitylation	K622		-1.827	_SESQK(gl)EDPFNIAEPR_
ZNF281	Phosphorylation	S651	0.362	0.137	_VDLHTSGEHSELVQEENLS(ph)PGTQTPSNDK_
ZNF281	Phosphorylation	T654	0.273		_VDLHTSGEHSELVQEENLSPGT(ph)QTPSNDK_
ZNF281	Phosphorylation	T888	0.078	-0.076	_VKT(ph)PTSQSYR_
ZNF335	Phosphorylation	S976	-1.197	-1.248	_DGPEPPS(ph)PAK_
ZNF513	Phosphorylation	S253	-1.477	-0.499	_PARPPS(ph)PTEQEGAVPR_
ZNF639	Phosphorylation	S88	1.106	0.234	_NQNYLVPS(ph)PVLR_
ZNF639	Ubiquitylation	K369	0.828		_ITFDK(gl)CK_