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Query: RFX3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RFX3 0 -0.694 1.310 -0.470
RFX3 0 -0.694 1.310 -0.470 -1.319 0.299 0.084

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RFX3 Phosphorylation S155 -0.079 0.160 _AS(ph)PATIEMAIETLQK_
RFX3 Phosphorylation T164 0.082 -0.152 _PGHVSPLQLT(ph)NIQVPQQALPTQR_

Background Information for RFX3:


Pubmed-RFX3 »
Uniprot-RFX3 »
Biogrid-RFX3 »
ProteomicsDB-RFX3 »

Tumorportal-RFX3 »
COSMIC-RFX3 »
GenomeRNAi-RFX3 »
Genecards-RFX3


Protein-protein Interactions for RFX3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FOXJ1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RFX3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RFX3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DNA-bd_RFX IPR003150 0
Category members RFX1_trans_act IPR007668 0


Protein complexes (CORUM database) featuring RFX3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RFX3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0000790 nuclear chromatin Database 0.46
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0050796 regulation of insulin secretion Database 0.06
Category members GO Category GO:0044212 transcription regulatory region DNA binding Database 0
Category members GO Category GO:0003705 RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007368 determination of left/right symmetry Database 0
Category members GO Category GO:0031018 endocrine pancreas development Database 0
Category members GO Category GO:0042384 cilium assembly Database 0
Category members GO Category GO:0048469 cell maturation Database 0
Category members GO Category GO:0060285 ciliary cell motility Database 0
Category members GO Category GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry Database 0


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