bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: GFI1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GFI1 0 0.770 0.150 0.340

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GFI1 Phosphorylation S68 0.285 0.145 _DRLS(ph)PESQLTEAPDR_

Background Information for GFI1:





Protein-protein Interactions for GFI1

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in GFI1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_C2H2-like IPR015880 1.29
Category members Znf_C2H2 IPR007087 0.92


Protein complexes (CORUM database) featuring GFI1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GFI1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0016363 nuclear matrix Database 1.89
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle Database 0.34
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0017053 transcriptional repressor complex Database 0.28
Category members Pathway Pathway_142 PID_MYC_REPRESS_PATHWAY 0 0.21
Category members GO Category GO:0016604 nuclear body Database 0.04
Category members GO Category GO:0032088 negative regulation of NF-kappaB transcription factor activity Database 0.04
Category members GO Category GO:0010977 negative regulation of neuron projection development Database 0.04
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0044212 transcription regulatory region DNA binding Database 0
Category members Disease phenotype Autosomal_dominant_severe_congenital_neutropenia Autosomal dominant severe congenital neutropenia Database 0
Category members GO Category GO:0007638 mechanosensory behavior Database 0
Category members GO Category GO:0010957 negative regulation of vitamin D biosynthetic process Database 0
Category members GO Category GO:0034121 regulation of toll-like receptor signaling pathway Database 0
Category members GO Category GO:0042472 inner ear morphogenesis Database 0
Category members GO Category GO:0042491 auditory receptor cell differentiation Database 0
Category members GO Category GO:0042660 positive regulation of cell fate specification Database 0
Category members GO Category GO:0045165 cell fate commitment Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0071222 cellular response to lipopolysaccharide Database 0


© Copyright Svejstrup Laboratory 2015