bioLOGIC-db

bioLOGIC Data

Query: TAF2

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
TAF2	0	3.394	-0.530	1.000				0.642	0.344

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
TAF2	Phosphorylation	S1184	0.809	0.599	_EKDKEPFTFS(ph)SPASGR_
TAF2	Phosphorylation	S1185	0.809		_EKDKEPFTFS(ph)SPASGR_

Pubmed-TAF2 »

ProteomicsDB-TAF2 »

COSMIC-TAF2 »

Genecards-TAF2

Protein-protein Interactions for TAF2

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait KIF4A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SAMM50	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait AKD1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RFC4	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RGS2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF7L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in TAF2

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	ARM-type_fold	IPR016024	9.26
Category members	Peptidase_M1_N	IPR014782	0

Protein complexes (CORUM database) featuring TAF2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	445	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	455	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	456	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	459	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	462	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	513	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	493	DAB complex	Database	0.04
Category members	Corum	470	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.02
Category members	Corum	155	TFIID complex	Database	0
Category members	Corum	3009	TFIID complex	Database	0
Category members	Corum	469	TFIID-beta complex	Database	0
Category members	Corum	492	DA complex	Database	0

Categories featuring TAF2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005488	binding	Database	9.32
Category members	GO Category	GO:0000086	G2/M transition of mitotic cell cycle	Database	0.33
Category members	GO Category	GO:0008270	zinc ion binding	Database	0.29
Category members	GO Category	GO:0006367	transcription initiation from RNA polymerase II promoter	Database	0.25
Category members	GO Category	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Database	0.13
Category members	GO Category	GO:0033276	transcription factor TFTC complex	Database	0.06
Category members	GO Category	GO:0044212	transcription regulatory region DNA binding	Database	0
Category members	Pathway	Pathway_856	KEGG_BASAL_TRANSCRIPTION_FACTORS	0	0
Category members	Disease phenotype	Autosomal_Recessive_Mental_Retardation	Autosomal Recessive Mental Retardation	Database	0
Category members	GO Category	GO:0005669	transcription factor TFIID complex	Database	0
Category members	GO Category	GO:0008237	metallopeptidase activity	Database	0
Category members	GO Category	GO:0014070	response to organic cyclic compound	Database	0