RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GTF2H1	3	-0.470	0.340	0.260	2.656	2.859	1.092	0.966
GTF2H2	2	0.890	-0.020	0.105	2.323	2.292	1.092	0.150
GTF2H2C	2			0.105	2.323	2.292	1.092	0.150
GTF2B	1	0.010	-0.230		-1.841	-0.911
TAF7	1	0.270	-0.210
GTF2H4	1	-1.010	2.070		1.371	2.504
TAF2	0	-0.530	1.000				0.642	0.344
AK6	0	1.570	-1.340	0.364
TAF9B	0	0.230	-0.620	0.364
TAF6	0	-0.130	-0.310	-0.213	-1.092	0.653	0.100	0.301
GTF2H3	0	-0.020	0.680				1.408	0.908
TBP	0	1.610	-1.170	-0.831
TAF12	0	-0.620	-0.070	0.042
TAF1L	0						0.381	0.385
GTF2F1	0	-0.280	0.230	-3.106			1.494	-0.308
TAF4	0			0.967	0.295	0.068	1.083	0.605
TAF5L	0							0.816
TAF4B	0	-0.140	0.170	0.967	0.295	0.068	1.083	0.605
TAF1	0						0.381	0.385
TAF5	0	1.390	-1.390	-2.311	0.004	0.398	1.017	0.674
GTF2E1	0	-0.370	0.610					-0.580
TAF6L	0	0.320	-0.810
TAF6L	0	0.320	-0.810	0.378				-1.536
GTF2F2	0	-0.390	0.630	-3.244			-0.223
TAF13	0	1.440	-0.860

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AK6	Ubiquitylation	K5		-0.683	_(ac)MESGK(gl)TASPK_
AK6	Ubiquitylation	K10		-0.576	_TASPK(gl)SMPK_
GTF2B	Ubiquitylation	K59	0.815		_TFSNDK(gl)ATKDPSR_
GTF2B	Phosphorylation	S70	0.024	1.199	_VGDS(ph)QNPLLSDGDLSTMIGK_
GTF2B	Ubiquitylation	K100	0.563		_GTGAASFDEFGNSK(gl)YQNRR_
GTF2B	Ubiquitylation	K149	0.704		_QVYEQK(gl)SLK_
GTF2B	Ubiquitylation	K178	1.874		_TFK(gl)EICAVSR_
GTF2F1	Phosphorylation	S385	0.043	0.017	_GNS(ph)RPGT(ph)PSAEGGSTSSTLR_
GTF2F1	Phosphorylation	T389	0.484	-0.150	_GNS(ph)RPGT(ph)PSAEGGSTSSTLR_
GTF2F1	Phosphorylation	S391	-0.032	-0.039	_GNS(ph)RPGTPS(ph)AEGGSTSSTLR_
GTF2F1	Phosphorylation	S433	-0.395	-0.554	_LDTGPQSLS(ph)GK_
GTF2F1	Phosphorylation	T445	0.385	0.574	_T(ph)TPNSGDVQVTEDAVR_
GTF2F1	Phosphorylation	T446	0.385	0.574	_T(ph)TPNSGDVQVTEDAVR_
GTF2F2	Ubiquitylation	K33	-0.261	-0.017	_YLSQQWAK(gl)ASGR_
GTF2F2	Ubiquitylation	K137	-1.076	0.094	_LQIEESSK(gl)PVR_
GTF2H1	Ubiquitylation	K240	2.338		_LNTGSK(gl)DLFAECAK_
GTF2H2	Ubiquitylation	K42	-0.223		_ATIEDILFKAK(gl)_
GTF2H2	Ubiquitylation	K77		-1.015	_TMEDQDLK(gl)PNR_
GTF2H2	Ubiquitylation	K116		-1.309	_RAEK(gl)LTELSGNPR_
GTF2H2C	Ubiquitylation	K42	-0.223		_ATIEDILFKAK(gl)_
GTF2H2C	Ubiquitylation	K77		-1.015	_TMEDQDLK(gl)PNR_
GTF2H2C	Ubiquitylation	K116		-1.309	_RAEK(gl)LTELSGNPR_
GTF2H3	Ubiquitylation	K28		-0.741	_QALK(gl)ESQFTLSK_
GTF2H3	Ubiquitylation	K74		-0.538	_FLYPGK(gl)NGR_
GTF2H3	Ubiquitylation	K125	-0.584	-0.425	_SDIK(gl)GQHTETLLAGSLAK_
GTF2H3	Ubiquitylation	K152	-0.594		_MNKEVK(gl)DNQEMK_
GTF2H3	Ubiquitylation	K300		-1.837	_ISLPPVLKAK(gl)_
GTF2H4	Ubiquitylation	K452		-2.338	_LMVVTPAGHSDVK(gl)R_
TAF1	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TAF12	Phosphorylation	S51	0.073	-0.035	_LS(ph)PENNQVLTK_
TAF13	Phosphorylation	T9	-0.230	-0.045	_ADEEEDPT(ph)FEEENEEIGGGAEGGQGK_
TAF1L	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1L	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1L	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1L	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TAF2	Phosphorylation	S1184	0.809	0.599	_EKDKEPFTFS(ph)SPASGR_
TAF2	Phosphorylation	S1185	0.809		_EKDKEPFTFS(ph)SPASGR_
TAF5	Ubiquitylation	K318	0.476	0.385	_DSYQLLK(gl)R_
TAF5L	Ubiquitylation	K303		-1.030	_LK(gl)SEPHQVDVSR_
TAF5L	Ubiquitylation	K481	-0.321		_GPVLSLAFSPNGK(gl)YLASAGEDQR_
TAF6	Ubiquitylation	K357	0.692	0.215	_ITK(gl)TFTK_
TAF6	Phosphorylation	S532	-1.108	-0.959	_AAAPPQPS(ph)PPPTK_
TAF6	Phosphorylation	S653	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6	Phosphorylation	T660	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6L	Ubiquitylation	K549		-0.992	_DVFQK(gl)SR_
TAF7	Ubiquitylation	K40	-0.984	0.784	_AVQSGHVNLK(gl)DR_
TAF7	Phosphorylation	S171		1.574	_LLS(ph)TDAEAVSTR_
TAF7	Phosphorylation	S201	0.225	0.409	_EAENQGLDISS(ph)PGMSGHR_
TAF9B	Ubiquitylation	K5		-0.683	_(ac)MESGK(gl)TASPK_
TAF9B	Ubiquitylation	K10		-0.576	_TASPK(gl)SMPK_
TBP	Ubiquitylation	K181	-0.140	-0.577	_LDLK(gl)TIALR_
TBP	Ubiquitylation	K225		-0.596	_MVCTGAK(gl)SEEQSR_