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Query: TAF4B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TAF4B 0 3.188 -0.140 0.170 0.967 0.295 0.068 1.083 0.605

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for TAF4B:


Pubmed-TAF4B »
Uniprot-TAF4B »
Biogrid-TAF4B »
ProteomicsDB-TAF4B »

Tumorportal-TAF4B »
COSMIC-TAF4B »
GenomeRNAi-TAF4B »
Genecards-TAF4B


Protein-protein Interactions for TAF4B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BACH1 Cat. description Hein, Mann, Cell 2015
Category members IP bait KPNB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TAF7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TAF8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TAF4B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Histone-fold IPR009072 0.01
Category members TAFH_NHR1 IPR003894 0


Protein complexes (CORUM database) featuring TAF4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 485 TFIID complex, B-cell specific Database 0


Categories featuring TAF4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_197 REACTOME_HIV_INFECTION 0 12.07
Category members Pathway Pathway_376 REACTOME_HIV_LIFE_CYCLE 0 9.45
Category members Pathway Pathway_348 REACTOME_TRANSCRIPTION 0 9
Category members Pathway Pathway_374 REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE 0 7.57
Category members GO Category GO:0006352 DNA-dependent transcription, initiation Database 3.76
Category members Pathway Pathway_375 REACTOME_RNA_POL_II_TRANSCRIPTION 0 2.46
Category members GO Category GO:0006368 transcription elongation from RNA polymerase II promoter Database 2.03
Category members Pathway Pathway_363 REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS 0 1.84
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members Pathway Pathway_65 PID_MYC_ACTIV_PATHWAY 0 1.08
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Pathway Pathway_32 KEGG_HUNTINGTONS_DISEASE 0 0.46
Category members Pathway Pathway_370 REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING 0 0.34
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members GO Category GO:0006367 transcription initiation from RNA polymerase II promoter Database 0.25
Category members GO Category GO:0051059 NF-kappaB binding Database 0.25
Category members Pathway Pathway_856 KEGG_BASAL_TRANSCRIPTION_FACTORS 0 0
Category members Disease phenotype Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation Male infertility with azoospermia or oligozoospermia due to single gene mutation Database 0
Category members GO Category GO:0005669 transcription factor TFIID complex Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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