RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
H2AFX	2
PRPF8	2			0.601	-0.444	0.045	-0.568	-0.007
H2AFX	2			-0.474	-0.395	0.182	0.824	0.499
H2AFX	2
H2AFV	1	0.060	-0.590	-0.474	-0.395	0.182	0.824	0.499
H2AFY	1	0.440	0.350	-0.717	0.162	0.382
DR1	1	2.770	-1.320
HIST3H2BB	1			-0.620	0.066	0.702
HIST1H2BA	1	1.350	-0.610	-0.763	-0.031	0.617
HIST1H2BA	1	1.350	-0.610
HIST1H2BC	1	-0.640	0.760	-0.763	-0.031	0.617
HIST1H2BC	1	-0.640	0.760
HIST1H2BD	1	-1.230	2.090	-0.763	-0.031	0.617
HIST1H2BD	1	-1.230	2.090
HIST1H2BK	1	-0.250	0.200	-0.763	-0.031	0.617
HIST1H2BK	1	0.180	-0.710	-0.763	-0.031	0.617
HIST1H2BK	1	-0.250	0.200
HIST1H2BK	1	0.180	-0.710
HIST1H2BL	1	0.960	-0.700	-0.763	-0.031	0.617
HIST1H2BL	1	0.960	-0.700
HIST1H2BN	1	0.310	-0.580	-0.763	-0.031	0.617
HIST1H2BN	1	0.310	-0.580
HIST2H2BF	1			-0.763	-0.031	0.617
HIST2H2BF	1
HIST3H2BB	1
HIST1H2BC	1	-0.640	0.760
HIST1H2BD	1	-1.230	2.090
HIST1H2BK	1	-0.250	0.200
HIST1H2BK	1	0.180	-0.710
HIST1H2BL	1	0.960	-0.700
HIST1H2BN	1	0.310	-0.580
HIST2H2BF	1
HIST3H2BB	1
H2AFZ	1	0.940	-0.950	-0.474	-0.395	0.182	0.824	0.499
HIST1H2AA	1	0.700	-0.640	-0.474	-0.395	0.182	0.824	0.499
HIST1H2AA	1	0.700	-0.640
HIST1H2BL	1	0.960	-0.700
HIST3H2BB	1
HIST1H2BK	1	-0.250	0.200
HIST1H2BK	1	0.180	-0.710
NFYC	0	-1.080	1.710				-0.084	0.484
H2AFY2	0	0.600	-0.650				0.895	0.516
CENPT	0	-0.330	0.020
CHRAC1	0	0.360	0.340		-0.305	0.651
TAF6	0	-0.130	-0.310	-0.213	-1.092	0.653	0.100	0.301
SOS1	0	0.500	-0.620	-0.570
TAF12	0	-0.620	-0.070	0.042
NFYB	0	-1.100	1.620				0.915
HIST1H2BJ	0	0.160	-0.190	-0.620	0.066	0.702
HIST2H2BE	0	1.360	-0.600	-0.620	0.066	0.702
TAF4	0			0.967	0.295	0.068	1.083	0.605
TAF4B	0	-0.140	0.170	0.967	0.295	0.068	1.083	0.605
POLE3	0	-0.830	0.170		-0.901	-0.263
TAF6L	0	0.320	-0.810
TAF6L	0	0.320	-0.810	0.378				-1.536
H3F3A	0	-0.610	0.000	-0.645
H3F3C	0			-0.645
HIST2H3A	0			-0.645
HIST2H3C	0	-0.950	1.680	-0.645
HIST2H3D	0			-0.645
HIST3H3	0	-0.240	0.240	-0.645
HIST2H2AB	0	-0.550	0.800
TAF3	0	-0.260	-0.410				-0.724	-0.346
H2AFJ	0	0.080	-0.770	-0.438	0.112	0.401
HIST1H2AC	0	-0.580	1.490	-0.438	0.112	0.401
HIST1H2AD	0			-0.438	0.112	0.401
HIST1H2AG	0			-0.438	0.112	0.401
HIST1H2AI	0			-0.438	0.112	0.401
HIST2H2AA3	0			-0.438	0.112	0.401
HIST2H2AC	0	1.060	-0.910	-0.438	0.112	0.401
HIST3H2A	0	1.080	-1.070	-0.438	0.112	0.401
TAF13	0	1.440	-0.860
H2AFJ	0	0.080	-0.770

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CENPT	Phosphorylation	S397	-0.408	-0.375	_AAS(ph)PESASSTPESLQAR_
DR1	Ubiquitylation	K128	-0.035	0.356	_QQQELFAK(gl)AR_
H2AFJ	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
H2AFJ	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
H2AFJ	Ubiquitylation	K119	0.014	0.142	_VTIAQGGVLPNIQAVLLPK(gl)K_
H2AFJ	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
H2AFJ	Ubiquitylation	K120	0.028	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)_
H2AFJ	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
H2AFV	Ubiquitylation	K116	-0.071		_ATIAGGGVIPHIHK(gl)SLIGK_
H2AFV	Ubiquitylation	K121	1.548	0.818	_SLIGK(gl)K(gl)GQQK_
H2AFV	Ubiquitylation	K122	1.238	-0.400	_SLIGK(gl)K(gl)GQQK_
H2AFV	Ubiquitylation	K126	1.132		_KGQQK(gl)TV_
H2AFX	Ubiquitylation	K116	-0.071		_ATIAGGGVIPHIHK(gl)SLIGK_
H2AFX	Ubiquitylation	K119	-0.262		_LLGGVTIAQGGVLPNIQAVLLPK(gl)K_
H2AFX	Ubiquitylation	K120	0.702	0.181	_K(gl)TSATVGPK_
H2AFX	Ubiquitylation	K121	1.548	0.818	_SLIGK(gl)K(gl)GQQK_
H2AFX	Ubiquitylation	K122	1.238	-0.400	_SLIGK(gl)K(gl)GQQK_
H2AFX	Ubiquitylation	K126	1.132		_KGQQK(gl)TV_
H2AFX	Ubiquitylation	K128	-0.411	0.117	_KTSATVGPK(gl)APSGGKK_
H2AFX	Phosphorylation	S140	1.817	1.205	_KATQAS(ph)QEY_
H2AFY	Ubiquitylation	K116	-0.551	0.254	_GVTIASGGVLPNIHPELLAK(gl)K_
H2AFY	Ubiquitylation	K117	-0.333	-0.043	_GVTIASGGVLPNIHPELLAKK(gl)_
H2AFY	Ubiquitylation	K121	-0.646	-0.167	_GSK(gl)GKLEAIITPPPAKK_
H2AFY	Ubiquitylation	K123	-0.548	-0.558	_GK(gl)LEAIITPPPAKK_
H2AFY	Phosphorylation	T129	-1.725	-1.166	_LEAIIT(ph)PPPAK_
H2AFY	Ubiquitylation	K167	0.462		_QGEVSK(gl)AASADSTTEGTPADGFTVLSTK_
H2AFY	Phosphorylation	S170	0.502		_AAS(ph)ADSTTEGTPADGFTVLSTK_
H2AFY	Phosphorylation	T178	0.817	0.888	_AASADSTTEGT(ph)PADGFTVLSTK_
H2AFY	Ubiquitylation	K292	1.109		_CEELLEK(gl)TVK_
H2AFY	Ubiquitylation	K295	1.067	1.894	_TVK(gl)NCLALADDKK_
H2AFY	Ubiquitylation	K304	1.053	0.925	_NCLALADDK(gl)K_
H2AFY	Ubiquitylation	K305	0.941		_NCLALADDKK(gl)_
H2AFY	Ubiquitylation	K307	0.761	-0.193	_LK(gl)SIAFPSIGSGR_
H2AFY	Ubiquitylation	K323	0.614		_NGFPK(gl)QTAAQLILK_
H2AFY2	Ubiquitylation	K116	0.566	0.180	_GVTIASGGVLPRIHPELLAK(gl)K(gl)_
H2AFY2	Ubiquitylation	K117	0.174	-0.019	_GVTIASGGVLPRIHPELLAK(gl)K(gl)_
H2AFY2	Ubiquitylation	K123	-0.721	-0.453	_GK(gl)SETILSPPPEKR_
H2AFZ	Ubiquitylation	K116	-0.071		_ATIAGGGVIPHIHK(gl)SLIGK_
H2AFZ	Ubiquitylation	K121	1.548	0.818	_SLIGK(gl)K(gl)GQQK_
H2AFZ	Ubiquitylation	K122	1.238	-0.400	_SLIGK(gl)K(gl)GQQK_
H2AFZ	Ubiquitylation	K126	1.132		_KGQQK(gl)TV_
HIST1H2AA	Ubiquitylation	K116	-0.071		_ATIAGGGVIPHIHK(gl)SLIGK_
HIST1H2AA	Ubiquitylation	K119	-0.262		_LLGGVTIAQGGVLPNIQAVLLPK(gl)K_
HIST1H2AA	Ubiquitylation	K120	0.702	0.181	_K(gl)TSATVGPK_
HIST1H2AA	Ubiquitylation	K121	1.548	0.818	_SLIGK(gl)K(gl)GQQK_
HIST1H2AA	Ubiquitylation	K122	1.238	-0.400	_SLIGK(gl)K(gl)GQQK_
HIST1H2AA	Ubiquitylation	K126	1.132		_KGQQK(gl)TV_
HIST1H2AC	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST1H2AC	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST1H2AC	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST1H2AC	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST1H2AD	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST1H2AD	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST1H2AD	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST1H2AD	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST1H2AG	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST1H2AG	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST1H2AG	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST1H2AG	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST1H2AI	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST1H2AI	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST1H2AI	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST1H2AI	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST1H2BA	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BA	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BA	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST1H2BC	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST1H2BC	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST1H2BC	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST1H2BC	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST1H2BC	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BC	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BC	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST1H2BD	Ubiquitylation	K6	-1.148	-0.413	_PEPTK(gl)SAPAPK_
HIST1H2BD	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST1H2BD	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST1H2BD	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST1H2BD	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST1H2BD	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BD	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BD	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST1H2BK	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST1H2BK	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST1H2BK	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST1H2BK	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST1H2BK	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BK	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BK	Ubiquitylation	K121	-1.382	-0.433	_AVTK(gl)YTSAK_
HIST1H2BL	Ubiquitylation	K6	-0.864	-0.190	_PELAK(gl)SAPAPK_
HIST1H2BL	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST1H2BL	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST1H2BL	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST1H2BL	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST1H2BL	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BL	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BL	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST1H2BN	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST1H2BN	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST1H2BN	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST1H2BN	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST1H2BN	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST1H2BN	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST1H2BN	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST2H2AA3	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST2H2AA3	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST2H2AA3	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST2H2AA3	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST2H2AB	Ubiquitylation	K119	-0.262		_LLGGVTIAQGGVLPNIQAVLLPK(gl)K_
HIST2H2AC	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST2H2AC	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST2H2AC	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST2H2AC	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST2H2BF	Ubiquitylation	K35	-0.211		_SRK(gl)ESYSVYVYK_
HIST2H2BF	Ubiquitylation	K44		1.903	_ESYSVYVYK(gl)VLK_
HIST2H2BF	Ubiquitylation	K47	0.349	1.603	_VLK(gl)QVHPDTGISSK_
HIST2H2BF	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST2H2BF	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST2H2BF	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST2H2BF	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
HIST3H2A	Ubiquitylation	K96	0.928	0.630	_NDEELNK(gl)LLGK_
HIST3H2A	Ubiquitylation	K119	0.219	0.142	_VTIAQGGVLPNIQAVLLPK(gl)KTESHHK_
HIST3H2A	Ubiquitylation	K120	0.042	0.241	_VTIAQGGVLPNIQAVLLPKK(gl)TESHHK_
HIST3H2A	Ubiquitylation	K126	0.224		_VTIAQGGVLPNIQAVLLPKKTESHHK(gl)_
HIST3H2BB	Ubiquitylation	K6	-0.872	-0.694	_PDPSK(gl)SAPAPK_
HIST3H2BB	Ubiquitylation	K86	0.468		_LAHYNK(gl)R_
HIST3H2BB	Ubiquitylation	K109	0.117	0.362	_LLLPGELAK(gl)HAVSEGTK_
HIST3H2BB	Ubiquitylation	K117	0.346	1.538	_HAVSEGTK(gl)AVTK_
HIST3H2BB	Ubiquitylation	K121	-0.997	0.088	_AVTK(gl)YTSSK_
NFYC	Ubiquitylation	K36	-0.455	-0.045	_NLTVK(gl)DFR_
POLE3	Ubiquitylation	K31	-0.408	-0.365	_EALPDGVNISK(gl)EAR_
PRPF8	Ubiquitylation	K36	1.198		_K(gl)WQQLQAK_
PRPF8	Ubiquitylation	K218		0.783	_K(gl)YVNGSTYQR_
PRPF8	Ubiquitylation	K442	-0.412	-0.328	_EHCPAGQPVK(gl)VR_
PRPF8	Ubiquitylation	K449		0.961	_VSYQK(gl)LLK_
PRPF8	Ubiquitylation	K785	1.193	0.381	_LYLK(gl)AEQER_
PRPF8	Ubiquitylation	K847	4.280	4.737	_LK(gl)EAYSVK_
PRPF8	Ubiquitylation	K853	0.313	0.906	_EAYSVK(gl)SR_
PRPF8	Ubiquitylation	K1131		-0.581	_YLTEHPDPNNENIVGYNNK(gl)K_
PRPF8	Ubiquitylation	K1132		-0.621	_YLTEHPDPNNENIVGYNNKK(gl)_
PRPF8	Ubiquitylation	K1144	1.075	0.092	_LMK(gl)HDVNLGR_
PRPF8	Ubiquitylation	K1158		0.553	_AVFWDIK(gl)NR_
PRPF8	Ubiquitylation	K1300	1.721		_IK(gl)IGLNSK_
PRPF8	Ubiquitylation	K1344	0.647		_WSK(gl)QTDVGITHFR_
PRPF8	Ubiquitylation	K1392	0.488	0.214	_VWAEYALK(gl)R_
PRPF8	Ubiquitylation	K1443	0.849	0.161	_TDFK(gl)QYQVLK_
PRPF8	Ubiquitylation	K1735		0.067	_IMK(gl)ANPALYVLR_
PRPF8	Ubiquitylation	K1859		-0.720	_SLPVEEQPK(gl)QIIVTR_
PRPF8	Ubiquitylation	K1993	0.886	-0.521	_DLILADYGK(gl)K_
PRPF8	Ubiquitylation	K1994	0.886	-0.521	_DLILADYGK(gl)K_
PRPF8	Ubiquitylation	K2031	0.976		_QQIAEIEK(gl)QTK_
PRPF8	Ubiquitylation	K2034	0.488	0.601	_QTK(gl)EQSQLTATQTR_
PRPF8	Ubiquitylation	K2140		-0.848	_AQIAGYLYGVSPPDNPQVK(gl)EIR_
SOS1	Phosphorylation	S1082	0.278		_IPESETESTASAPNS(ph)PR_
SOS1	Phosphorylation	S1166	0.097	-0.094	_RPESAPAES(ph)SPSK_
TAF12	Phosphorylation	S51	0.073	-0.035	_LS(ph)PENNQVLTK_
TAF13	Phosphorylation	T9	-0.230	-0.045	_ADEEEDPT(ph)FEEENEEIGGGAEGGQGK_
TAF3	Phosphorylation	S183		-0.112	_RPLDS(ph)PEAEELPAMK_
TAF3	Phosphorylation	S229		-1.137	_IPPMLS(ph)PVHVQDSTDLAPPS(ph)PEPPM(ox)LAPVAK_
TAF3	Phosphorylation	S243		-1.351	_IPPMLS(ph)PVHVQDSTDLAPPS(ph)PEPPM(ox)LAPVAK_
TAF3	Phosphorylation	S297	-0.096	0.222	_TAQSPAMVGS(ph)PIR_
TAF6	Ubiquitylation	K357	0.692	0.215	_ITK(gl)TFTK_
TAF6	Phosphorylation	S532	-1.108	-0.959	_AAAPPQPS(ph)PPPTK_
TAF6	Phosphorylation	S653	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6	Phosphorylation	T660	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6L	Ubiquitylation	K549		-0.992	_DVFQK(gl)SR_