bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: TAF3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TAF3 0 -0.944 -0.260 -0.410 -0.724 -0.346

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TAF3 Phosphorylation S297 -0.096 0.222 _TAQSPAMVGS(ph)PIR_
TAF3 Phosphorylation S183 -0.112 _RPLDS(ph)PEAEELPAMK_
TAF3 Phosphorylation S229 -1.137 _IPPMLS(ph)PVHVQDSTDLAPPS(ph)PEPPM(ox)LAPVAK_
TAF3 Phosphorylation S243 -1.351 _IPPMLS(ph)PVHVQDSTDLAPPS(ph)PEPPM(ox)LAPVAK_

Background Information for TAF3:


Pubmed-TAF3 »
Uniprot-TAF3 »
Biogrid-TAF3 »
ProteomicsDB-TAF3 »

Tumorportal-TAF3 »
COSMIC-TAF3 »
GenomeRNAi-TAF3 »
Genecards-TAF3


Protein-protein Interactions for TAF3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MZT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TAF7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TAF8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TAF3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_FYVE_PHD IPR011011 1.23
Category members Znf_PHD IPR001965 1.15
Category members Znf_PHD-finger IPR019787 0.91
Category members BTP IPR006565 0.04
Category members Histone-fold IPR009072 0.01


Protein complexes (CORUM database) featuring TAF3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 493 DAB complex Database 0.04
Category members Corum 492 DA complex Database 0


Categories featuring TAF3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0002039 p53 binding Database 2.06
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28
Category members GO Category GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity Database 0.18
Category members GO Category GO:0051457 maintenance of protein location in nucleus Database 0.05
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0005669 transcription factor TFIID complex Database 0


.

© Copyright Svejstrup Laboratory 2015