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Query: H2AFV

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
H2AFV 1 3.002 0.060 -0.590 -0.474 -0.395 0.182 0.824 0.499

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
H2AFV Ubiquitylation K121 1.548 0.818 _SLIGK(gl)K(gl)GQQK_
H2AFV Ubiquitylation K122 1.238 -0.400 _SLIGK(gl)K(gl)GQQK_
H2AFV Ubiquitylation K116 -0.071 _ATIAGGGVIPHIHK(gl)SLIGK_
H2AFV Ubiquitylation K126 1.132 _KGQQK(gl)TV_

Background Information for H2AFV:


Pubmed-H2AFV »
Uniprot-H2AFV »
Biogrid-H2AFV »
ProteomicsDB-H2AFV »

Tumorportal-H2AFV »
COSMIC-H2AFV »
GenomeRNAi-H2AFV »
Genecards-H2AFV


Protein-protein Interactions for H2AFV
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in H2AFV
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Histone_H2A IPR002119 0.84
Category members Histone_core_D IPR007125 0.12
Category members Histone-fold IPR009072 0.01


Protein complexes (CORUM database) featuring H2AFV
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring H2AFV
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006334 nucleosome assembly Database 3.77
Category members GO Category GO:0000786 nucleosome Database 2.41
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members Pathway Pathway_889 KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS 0 0.9
Category members GO Category GO:0046982 protein heterodimerization activity Database 0.28


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