bioLOGIC-db

bioLOGIC Data

Query: TAF9B

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
TAF9B	0	-0.212	0.230	-0.620	0.364

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
TAF9B	Ubiquitylation	K10		-0.576	_TASPK(gl)SMPK_
TAF9B	Ubiquitylation	K5		-0.683	_(ac)MESGK(gl)TASPK_

ProteomicsDB-TAF9B »

Protein-protein Interactions for TAF9B

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait MPP1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MTX1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait STRN3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait ATXN7L3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CCDC101	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PCDH20	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RFC4	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TADA1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TADA2B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TADA3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF5L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF6L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF7L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in TAF9B

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring TAF9B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	513	TFTC complex (TATA-binding protein-free TAF-II-containing complex)	Database	0.05
Category members	Corum	514	TFIID-beta complex	Database	0

Categories featuring TAF9B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0006352	DNA-dependent transcription, initiation	Database	3.76
Category members	GO Category	GO:0043066	negative regulation of apoptotic process	Database	0.6
Category members	GO Category	GO:0046982	protein heterodimerization activity	Database	0.28
Category members	GO Category	GO:0012501	programmed cell death	Database	0.1
Category members	GO Category	GO:0033276	transcription factor TFTC complex	Database	0.06
Category members	GO Category	GO:0050821	protein stabilization	Database	0.04
Category members	GO Category	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Database	0.02
Category members	Pathway	Pathway_856	KEGG_BASAL_TRANSCRIPTION_FACTORS	0	0
Category members	GO Category	GO:0003714	transcription corepressor activity	Database	0
Category members	GO Category	GO:0005669	transcription factor TFIID complex	Database	0
Category members	GO Category	GO:0014070	response to organic cyclic compound	Database	0
Category members	GO Category	GO:0030307	positive regulation of cell growth	Database	0