bioLOGIC-db

bioLOGIC Data

Query: RBBP5

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
RBBP5	0	2.144	-0.150	-0.170	0.443	0.219	0.902	0.167	0.464

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	Sequence
RBBP5	Ubiquitylation	K157	-0.051	_DQNK(gl)VLVCPMK_
RBBP5	Ubiquitylation	K207	-0.452	_RGEYIYTGNAK(gl)GK_
RBBP5	Ubiquitylation	K209	-0.452	_RGEYIYTGNAK(gl)GK_

ProteomicsDB-RBBP5 »

Protein-protein Interactions for RBBP5

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait BOD1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BOD1L1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CBX1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CXXC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FERMT3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYH7B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PCNA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PRPF3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SETD1B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TARDBP	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CXXC1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HCFC2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPL37A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait WDR5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in RBBP5

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	WD40_repeat_dom	IPR017986	1.39
Category members	WD40_repeat	IPR001680	0.52

Protein complexes (CORUM database) featuring RBBP5

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	1257	ALL-1 supercomplex	Database	4.3
Category members	Corum	2730	Set1B complex	Database	1.09
Category members	Corum	2731	Set1A complex	Database	0.62
Category members	Corum	1399	WDR5-ASH2L-RBBP5-MLL2 complex	Database	0.47
Category members	Corum	1254	Menin-associated histone methyltransferase complex	Database	0.35
Category members	Corum	5195	PTIP-HMT complex	Database	0.33
Category members	Corum	5386	MLL1-WDR5 complex	Database	0.31
Category members	Corum	1256	MLL-HCF complex	Database	0.3
Category members	Corum	1401	MOF complex	Database	0.09
Category members	Corum	1400	ASCOM complex	Database	0
Category members	Corum	3075	UTX-MLL2/3 complex	Database	0

Categories featuring RBBP5

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0006974	cellular response to DNA damage stimulus	Database	3.57
Category members	GO Category	GO:0051568	histone H3-K4 methylation	Database	1.7
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0042800	histone methyltransferase activity (H3-K4 specific)	Database	0.73
Category members	GO Category	GO:0048188	Set1C/COMPASS complex	Database	0.64
Category members	GO Category	GO:0035064	methylated histone residue binding	Database	0.53
Category members	GO Category	GO:0071339	MLL1 complex	Database	0.45
Category members	GO Category	GO:0043627	response to estrogen	Database	0.4
Category members	GO Category	GO:0035097	histone methyltransferase complex	Database	0.26
Category members	GO Category	GO:0044212	transcription regulatory region DNA binding	Database	0
Category members	GO Category	GO:0006355	regulation of transcription, DNA-dependent	Database	0