RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MGA	3	-1.560	2.090	-0.565	-0.808	-0.186	-0.167	0.160
MGA	3	-1.560	2.090		0.052	0.179
PELP1	2						-0.603	-0.181
PELP1	2			-0.689	-1.064	0.487
PELP1	2
LAS1L	1	-0.760	0.900	-0.061	-0.108	-0.303	0.131	0.244
CHD8	1	-1.310	2.760	-0.896	0.435	0.478	-1.819	-1.191
CHD8	1	-1.310	2.760	-1.168			0.026	0.297
RUVBL1	1	-2.280	5.280	0.726	0.246	0.680	0.325	0.277
TAF7	1	0.270	-0.210
RUVBL2	1	-2.210	5.080	0.796	0.479	0.807	0.364	0.491
PHF20	0	-1.230	1.970
KAT8	0	-0.610	0.360
TAF6	0	-0.130	-0.310	-0.213	-1.092	0.653	0.100	0.301
RBBP5	0	-0.150	-0.170	0.443	0.219	0.902	0.167	0.464
KANSL1	0	-0.150	0.110
RNF2	0	0.560	-0.930	-0.061	-0.694	0.392	0.384	0.526
MAX	0	-0.780	0.530		-0.276	0.290
MAX	0	-0.780	0.530
ASH2L	0	-0.380	-0.020	0.463	-0.135	0.610	0.279	0.403
TAF4	0			0.967	0.295	0.068	1.083	0.605
TEX10	0	1.450	-0.810	-0.782	-0.026		0.257	0.225
TAF1	0						0.381	0.385
INO80C	0	1.670	-0.760
SENP3	0	-0.730	0.550				0.242	0.595
E2F6	0	-0.120	0.020	-0.460	-0.876	0.160
MCRS1	0	-1.000	0.700
WDR5	0	0.230	0.330	-0.088	-0.237	0.506	0.098	-0.100
C17orf49	0			0.008	0.869
C17orf49	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
C17orf49	Phosphorylation	S76	-0.693	-0.492	_LGELTMQLHPVADS(ph)SPAGAK_
C17orf49	Phosphorylation	S77	-0.644	-0.371	_LGELTMQLHPVADSS(ph)PAGAK_
C17orf49	Phosphorylation	S137	-0.589	-0.859	_VYEDSGIPLPAES(ph)PKKGPK_
C17orf49	Phosphorylation	S147	-1.632	-1.957	_VAS(ph)GVLSPPPAAPPPSSSSVPEAGGPPIK_
C17orf49	Phosphorylation	S151	-1.596	-2.794	_VASGVLS(ph)PPPAAPPPSSSSVPEAGGPPIK_
CHD8	Phosphorylation	S557		-0.452	_VPVHQHS(ph)PSEPFLEKPVPDM(ox)TQVSGPNAQLVK_
CHD8	Ubiquitylation	K1766	0.498		_EQMK(gl)IEAAER_
CHD8	Phosphorylation	S1874	-0.088	-0.155	_TPFKDEIDEFANS(ph)PSEDKEESMEIHATGK_
CHD8	Phosphorylation	S1978	0.606	0.061	_M(ox)NYM(ox)QNHQAGAPAPSLS(ph)R_
CHD8	Phosphorylation	T1993	-1.383	-1.407	_T(ph)ASPLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK_
CHD8	Phosphorylation	S1995	-0.690	-1.351	_TAS(ph)PLPLRPDAPVEK_
CHD8	Phosphorylation	S2008	-1.339	-1.407	_T(ph)ASPLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK_
CHD8	Phosphorylation	S2046	0.427	0.449	_VS(ph)PSDTTPLVSR_
CHD8	Phosphorylation	S2519	-0.083	-0.552	_APGYPSS(ph)PVTTASGTTLR_
CHD8	Phosphorylation	S2533		-0.792	_RTS(ph)LSAEDAEVTK_
CHD8	Phosphorylation	S2559	-0.345	-0.513	_NIPS(ph)PGQLDPDTR_
CHD8	Phosphorylation	S2956	0.383	-0.248	_DGETLEGS(ph)DAEESLDK_
INO80C	Ubiquitylation	K145		-1.479	_NLK(gl)QILASER_
KANSL1	Phosphorylation	S249	0.824	0.879	_LS(ph)PGTDSSSNLGGVK_
KANSL1	Phosphorylation	S268	-0.393	0.604	_KS(ph)PLSSILFSALDSDTR_
KANSL1	Phosphorylation	S272	0.608	0.700	_KSPLSS(ph)ILFSALDSDTR_
KAT8	Phosphorylation	S37		-2.803	_(ac)AAQGAAAAVAAGTSGVAGEGEPGPGENAAAEGTAPS(ph)PGRVS(ph)PPTPAR_
KAT8	Phosphorylation	S42		-2.803	_(ac)AAQGAAAAVAAGTSGVAGEGEPGPGENAAAEGTAPS(ph)PGRVS(ph)PPTPAR_
LAS1L	Ubiquitylation	K263	2.192	0.054	_ALSHK(gl)ELYER_
LAS1L	Ubiquitylation	K292	-0.024	-0.559	_YLPK(gl)AIK_
LAS1L	Ubiquitylation	K295	-0.945	-0.992	_AIK(gl)AWNNPSPR_
LAS1L	Ubiquitylation	K312		0.006	_VECVLAELK(gl)GVTCENR_
LAS1L	Ubiquitylation	K486		-0.235	_IIFK(gl)AMGQGLPDEEQEK_
LAS1L	Ubiquitylation	K499	-0.269		_AMGQGLPDEEQEK(gl)LLR_
LAS1L	Phosphorylation	S560	0.205	0.024	_AQQQEEQGS(ph)VNDVKEEEKEEK_
LAS1L	Phosphorylation	S617	0.016	0.230	_MEVGPFSTGQES(ph)PTAENAR_
LAS1L	Phosphorylation	T619		0.155	_MEVGPFSTGQESPT(ph)AENAR_
MAX	Phosphorylation	S2	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S2	0.510	0.568	_(ac)S(ph)DNDDIEVESDADKR_
MAX	Phosphorylation	S11	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S11	-0.408	0.069	_(ac)S(ph)DNDDIEVES(ph)DADKR_
MAX	Ubiquitylation	K57	-0.903	0.246	_DSVPSLQGEK(gl)ASR_
MCRS1	Phosphorylation	S22	0.474	0.424	_(ac)ASGTASRS(ph)EDEESLAGQK_
MCRS1	Ubiquitylation	K211		-0.300	_ALFSK(gl)AEEQLLSK_
MCRS1	Phosphorylation	S282	0.297	0.169	_GDQVLNFS(ph)DAEDLIDDSK_
MGA	Phosphorylation	S56	0.206	-0.462	_TDQGILVTNQDACALASSVSS(ph)PVK_
MGA	Phosphorylation	S449	2.321	3.511	_WLPSS(ph)PSGVAK_
MGA	Phosphorylation	S645		-0.802	_NTPVS(ph)PGSTFPDVKPDLEDVDGVLFVSFESK_
MGA	Ubiquitylation	K715	1.514		_ELIEDLK(gl)TLR_
MGA	Ubiquitylation	K791	1.310		_TNDFTK(gl)IK_
MGA	Ubiquitylation	K817	0.432	-0.999	_NEGGNSESSLK(gl)NR_
MGA	Phosphorylation	S924	-0.700	-0.785	_SILPYPVS(ph)PK_
MGA	Ubiquitylation	K1201	-0.386		_GK(gl)LLTGIK_
MGA	Ubiquitylation	K1207	-0.851		_LLTGIK(gl)SPR_
MGA	Phosphorylation	S1208	1.646	1.566	_LLTGIKS(ph)PR_
MGA	Phosphorylation	S2620		-1.069	_GPLFSGPVVAVS(ph)PDLLESDLKPQVAGSAVALPENDDLFMMPR_
MGA	Phosphorylation	S2898	-0.139	-0.119	_ELPDVQGESDSIS(ph)PLLLHLEDDDFSENEK_
MGA	Phosphorylation	S2910	-0.546		_ELPDVQGESDSISPLLLHLEDDDFS(ph)ENEK_
PELP1	Ubiquitylation	K153		0.515	_LSSIK(gl)TR_
PELP1	Phosphorylation	S625	-0.285	-0.371	_GS(ph)PDGSLQTGKPSAPK_
PELP1	Phosphorylation	T889		-2.038	_AGSNEDPILAPSGT(ph)PPPTIPPDETFGGR_
PELP1	Phosphorylation	S1177	2.415	1.885	_GADTAPTLAPEALPS(ph)QGEVER_
PELP1	Phosphorylation	S1187	-1.852		_EGES(ph)PAAGPPPQELVEEEPSAPPTLLEEETEDGSDK_
PHF20	Phosphorylation	S488		-0.135	_SLEPEES(ph)PGKR_
RBBP5	Ubiquitylation	K157	-0.051		_DQNK(gl)VLVCPMK_
RBBP5	Ubiquitylation	K207	-0.452		_RGEYIYTGNAK(gl)GK_
RBBP5	Ubiquitylation	K209	-0.452		_RGEYIYTGNAK(gl)GK_
RNF2	Ubiquitylation	K65	0.105		_NTMTTK(gl)ECLHR_
RNF2	Ubiquitylation	K275	1.064		_SK(gl)GESNQMNLDTASEK_
RUVBL1	Ubiquitylation	K7	0.148	0.466	_MKIEEVK(gl)STTK_
RUVBL1	Ubiquitylation	K171	0.030	-0.502	_QLK(gl)LDPSIFESLQK_
RUVBL1	Ubiquitylation	K201	0.095		_VEAGDVIYIEANSGAVK(gl)R_
RUVBL2	Ubiquitylation	K9	-0.203	-0.294	_(ac)ATVTATTK(gl)VPEIRDVTR_
RUVBL2	Ubiquitylation	K160	0.331		_VGK(gl)LTLK_
RUVBL2	Ubiquitylation	K186	-0.554		_DK(gl)VQAGDVITIDK_
RUVBL2	Ubiquitylation	K234	-0.191	-0.742	_FVQCPDGELQK(gl)R_
RUVBL2	Ubiquitylation	K365	-0.355	-0.601	_LLIVSTTPYSEK(gl)DTK_
RUVBL2	Ubiquitylation	K368		-0.345	_LLIVSTTPYSEKDTK(gl)QILR_
RUVBL2	Ubiquitylation	K417		-1.196	_K(gl)GTEVQVDDIK(gl)R_
RUVBL2	Ubiquitylation	K427	0.479	0.403	_K(gl)GTEVQVDDIK(gl)R_
SENP3	Phosphorylation	S169	-0.526	-0.554	_NHLS(ph)PQQGGATPQVPSPCCR_
SENP3	Phosphorylation	S181	1.061	-0.600	_NHLSPQQGGATPQVPS(ph)PCCR_
SENP3	Phosphorylation	S212		-1.048	_LGLLGALMAEDGVRGS(ph)PPVPSGPPMEEDGLR_
SENP3	Ubiquitylation	K505		-0.150	_YLQAEAVK(gl)K_
SENP3	Ubiquitylation	K506		-0.150	_YLQAEAVK(gl)K_
TAF1	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TAF6	Ubiquitylation	K357	0.692	0.215	_ITK(gl)TFTK_
TAF6	Phosphorylation	S532	-1.108	-0.959	_AAAPPQPS(ph)PPPTK_
TAF6	Phosphorylation	S653	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6	Phosphorylation	T660	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF7	Ubiquitylation	K40	-0.984	0.784	_AVQSGHVNLK(gl)DR_
TAF7	Phosphorylation	S171		1.574	_LLS(ph)TDAEAVSTR_
TAF7	Phosphorylation	S201	0.225	0.409	_EAENQGLDISS(ph)PGMSGHR_
WDR5	Ubiquitylation	K27	-1.584		_AQPTPSSSATQSK(gl)PTPVKPNYALK_
WDR5	Ubiquitylation	K32	-1.722		_AQPTPSSSATQSKPTPVK(gl)PNYALK_
WDR5	Ubiquitylation	K120	0.445		_IWDVSSGK(gl)CLK_
WDR5	Ubiquitylation	K245	0.475		_LWDYSK(gl)GK_
WDR5	Ubiquitylation	K247	0.475		_LWDYSK(gl)GK_