bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: BASP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
BASP1 1 2.093 2.550 -1.210

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
BASP1 Ubiquitylation K20 0.964 0.789 _GYNVNDEKAK(gl)_
BASP1 Ubiquitylation K18 1.496 0.636 _GYNVNDEK(gl)AKEK_
BASP1 Phosphorylation S164 -0.762 0.038 _S(ph)DGAPASDSKPGSSEAAPSSK_
BASP1 Phosphorylation T36 -0.229 -0.041 _KAEGAATEEEGT(ph)PKESEPQAAAEPAEAK_
BASP1 Ubiquitylation K173 -0.916 -0.418 _SDGAPASDSK(gl)PGSSEAAPSSK_
BASP1 Phosphorylation T196 -0.654 _ETPAATEAPSST(ph)PK_
BASP1 Phosphorylation S194 -0.841 _ETPAATEAPS(ph)STPK_
BASP1 Ubiquitylation K52 0.100 -1.026 _ESEPQAAAEPAEAK(gl)EGK_
BASP1 Ubiquitylation K184 -2.030 -2.479 _SDGAPASDSKPGSSEAAPSSK(gl)ETPAATEAPSSTPK_
BASP1 Ubiquitylation K22 0.978 _GYNVNDEKAKEK(gl)_
BASP1 Ubiquitylation K163 -2.086 _KTEAPAAPAAQETK(gl)SDGAPASDSKPGSSEAAPSSK_
BASP1 Ubiquitylation K226 -0.819 _AQGPAASAEEPKPVEAPAANSDQTVTVK(gl)E_

Background Information for BASP1:





Protein-protein Interactions for BASP1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ACTB Cat. description Hein, Mann, Cell 2015
Category members IP bait ACTR2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ANLN Cat. description Hein, Mann, Cell 2015
Category members IP bait ARRB2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATP6AP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait BMPR1A Cat. description Hein, Mann, Cell 2015
Category members IP bait CALML3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait DBN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNA Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNB Cat. description Hein, Mann, Cell 2015
Category members IP bait FLOT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLOT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait IQGAP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH10 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO18A Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO19 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP1CB Cat. description Hein, Mann, Cell 2015
Category members IP bait SEPT9 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNPO Cat. description Hein, Mann, Cell 2015
Category members IP bait TMOD3 Cat. description Hein, Mann, Cell 2015
Category members IP bait TPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLC25A41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in BASP1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring BASP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring BASP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0019904 protein domain specific binding Database 1.85
Category members GO Category GO:0030426 growth cone Database 1.61
Category members GO Category GO:0008180 COP9 signalosome Database 1.47
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0008406 gonad development Database 0.06
Category members GO Category GO:0044212 transcription regulatory region DNA binding Database 0
Category members GO Category GO:0003714 transcription corepressor activity Database 0
Category members GO Category GO:0007356 thorax and anterior abdomen determination Database 0
Category members GO Category GO:0060231 mesenchymal to epithelial transition Database 0
Category members GO Category GO:0060421 positive regulation of heart growth Database 0
Category members GO Category GO:0060539 diaphragm development Database 0


© Copyright Svejstrup Laboratory 2015