RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
EPB41L2	2			1.324
EPB41L2	2			0.660			0.421	0.482
AMOTL1	2	-1.540	3.320	0.614			0.467	0.043
AMOTL1	2	-1.540	3.320
HSPA5	1	-0.670	0.310	-0.181	-0.208	0.339	-0.702	-0.192
HSP90AB1	1	1.280	-1.050	0.283	0.786	-1.175	0.317	0.463
MYH9	1	-1.530	2.620	0.366	-0.040	-0.375	0.136	-0.183
PLCG1	1	-0.170	0.000
COPS7B	1	-2.030	3.350	-0.797
COPS7B	1	-2.030	3.350
COPS2	1	-0.730	0.380	0.562	1.638	0.915
GPS1	1	0.850	-0.820		1.476	0.259
GPS1	1	0.850	-0.820	0.185
BASP1	1	2.550	-1.210
COPS8	1	-2.510	4.680	-0.425
COPS7A	0	-0.880	1.150	-0.112
DOCK7	0	-0.180	1.240	-1.046			0.305	0.146
COPS5	0	-0.780	1.480	-0.905	0.882	0.714
AMOT	0	1.330	-0.510	0.614			0.467	0.043
AMOT	0	1.330	-0.510
TMOD1	0	-0.360	-0.060	0.837			-0.008
COPS4	0	0.660	-0.480		0.087	0.400	-0.088
COPS4	0	0.660	-0.480	-0.426
COPS3	0	1.000	-0.850	-0.060			0.717	0.043
ATP5A1	0	-0.100	0.190	0.149	0.419	-0.743
STOML2	0	-1.000	1.080	0.526			0.025	-0.128
COPS6	0	0.920	-0.550	0.202			-0.766	0.032
HSPA6	0	0.130	-0.260		-0.018	0.333	0.022	0.090
HSPA6	0	0.130	-0.260	-0.061
GRB2	0	-0.240	0.300		-1.021	0.057	0.906
WDR6	0	0.590	-0.760	-0.847			-0.197	-0.347
NCKIPSD	0	0.410	-0.480	-0.666			0.444
NCKIPSD	0	0.880	-0.700	-0.666			0.444

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AMOT	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOT	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOT	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOT	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOT	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
AMOTL1	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOTL1	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOTL1	Ubiquitylation	K174	-0.710		_QEPQGQEHQVDNTVMEK(gl)QVR_
AMOTL1	Ubiquitylation	K227		0.218	_GQQQQQQQQGAVGHGYYMAGGTSQK(gl)SR_
AMOTL1	Ubiquitylation	K251	-0.083		_ANSGQAHKDEALK(gl)ELK_
AMOTL1	Phosphorylation	S269		0.526	_IMQLS(ph)LER_
AMOTL1	Ubiquitylation	K302	-1.446	-1.374	_VGGGPSPAQPAGK(gl)VLDPR_
AMOTL1	Ubiquitylation	K316	-0.341		_GPPPEYPFK(gl)TK_
AMOTL1	Ubiquitylation	K318	0.088	0.953	_TK(gl)QMMSPVSK_
AMOTL1	Ubiquitylation	K474	1.416	1.608	_FEK(gl)ELQR_
AMOTL1	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOTL1	Ubiquitylation	K625	1.158	1.703	_LQQALTQLQSACEK(gl)R_
AMOTL1	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOTL1	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
AMOTL1	Phosphorylation	S720	0.743	0.380	_DTTIINHS(ph)R_
ATP5A1	Ubiquitylation	K161		-1.608	_VVDALGNAIDGK(gl)GPIGSK_
ATP5A1	Ubiquitylation	K175		-0.184	_VGLK(gl)APGIIPR_
ATP5A1	Ubiquitylation	K261		-0.997	_STVAQLVK(gl)R_
BASP1	Ubiquitylation	K18	1.496	0.636	_GYNVNDEK(gl)AKEK_
BASP1	Ubiquitylation	K20	0.964	0.789	_GYNVNDEKAK(gl)_
BASP1	Ubiquitylation	K22	0.978		_GYNVNDEKAKEK(gl)_
BASP1	Phosphorylation	T36	-0.229	-0.041	_KAEGAATEEEGT(ph)PKESEPQAAAEPAEAK_
BASP1	Ubiquitylation	K52	0.100	-1.026	_ESEPQAAAEPAEAK(gl)EGK_
BASP1	Ubiquitylation	K163	-2.086		_KTEAPAAPAAQETK(gl)SDGAPASDSKPGSSEAAPSSK_
BASP1	Phosphorylation	S164	-0.762	0.038	_S(ph)DGAPASDSKPGSSEAAPSSK_
BASP1	Ubiquitylation	K173	-0.916	-0.418	_SDGAPASDSK(gl)PGSSEAAPSSK_
BASP1	Ubiquitylation	K184	-2.030	-2.479	_SDGAPASDSKPGSSEAAPSSK(gl)ETPAATEAPSSTPK_
BASP1	Phosphorylation	S194		-0.841	_ETPAATEAPS(ph)STPK_
BASP1	Phosphorylation	T196		-0.654	_ETPAATEAPSST(ph)PK_
BASP1	Ubiquitylation	K226	-0.819		_AQGPAASAEEPKPVEAPAANSDQTVTVK(gl)E_
COPS2	Ubiquitylation	K423	0.078	1.264	_IDQVNQLLELDHQK(gl)R_
COPS2	Ubiquitylation	K434	0.640	0.787	_YTALDK(gl)WTNQLNSLNQAVVSK_
COPS3	Ubiquitylation	K125		0.384	_GIGILK(gl)QAIDK_
COPS3	Ubiquitylation	K281	0.168	0.593	_NLVNK(gl)HSETFTR_
COPS3	Ubiquitylation	K296	0.462		_DNNMGLVK(gl)QCLSSLYK_
COPS3	Ubiquitylation	K391	0.160	-0.420	_LK(gl)AMDQEITVNPQFVQK_
COPS3	Phosphorylation	S407		1.311	_S(ph)MGSQEDDSGNKPSSYS_
COPS3	Phosphorylation	S410	0.685	1.334	_SM(ox)GS(ph)QEDDSGNKPSSYS_
COPS3	Phosphorylation	S423	0.370	0.214	_SMGSQEDDSGNKPSSYS(ph)_
COPS4	Ubiquitylation	K369	0.523		_AEK(gl)IASQMITEGR_
COPS5	Ubiquitylation	K34	0.220		_K(gl)QQQEILAAKPWTK_
COPS5	Ubiquitylation	K56	0.550		_YCK(gl)ISALALLK_
COPS5	Ubiquitylation	K180		0.752	_TISAGK(gl)VNLGAFR_
COPS5	Ubiquitylation	K194	-1.866		_GYK(gl)PPDEGPSEYQTIPLNK_
COPS7A	Ubiquitylation	K20		-0.948	_VTGQNQEQFLLLAK(gl)SAK_
COPS7A	Ubiquitylation	K95		-1.113	_NLPPLTEAQKNK(gl)_
COPS7A	Ubiquitylation	K199	0.012	-0.446	_ANQHK(gl)EQQLGLK_
COPS7A	Ubiquitylation	K217	0.124	-0.288	_QQIESEVANLK(gl)K_
COPS7A	Ubiquitylation	K218		-0.316	_QQIESEVANLK(gl)K_
COPS7A	Ubiquitylation	K269	-0.070		_GSAK(gl)IWSK_
COPS7B	Ubiquitylation	K217	0.130	0.026	_TQQQVEAEVTNIK(gl)K_
COPS7B	Ubiquitylation	K218		-0.260	_TQQQVEAEVTNIKK(gl)_
COPS7B	Ubiquitylation	K221	0.111	0.604	_TLK(gl)ATASSSAQEM(ox)EQQLAER_
COPS7B	Ubiquitylation	K257		-0.230	_VK(gl)GLVSSR_
DOCK7	Phosphorylation	S180	0.319	0.371	_S(ph)MSIDDTPR_
DOCK7	Ubiquitylation	K381		0.138	_LK(gl)SQADQFCQR_
DOCK7	Phosphorylation	S452	1.041	1.249	_TTS(ph)GDDACNLTSFR_
DOCK7	Phosphorylation	S888	0.502	0.610	_SAVRPAS(ph)LNLNR_
DOCK7	Phosphorylation	S896		-0.852	_S(ph)LSNSNPDISGTPTSPDDEVR_
DOCK7	Phosphorylation	S898	-2.241	-0.434	_SLS(ph)NSNPDISGTPTSPDDEVR_
DOCK7	Phosphorylation	S900	-0.947	-3.303	_SLSNS(ph)NPDISGT(ph)PTSPDDEVR_
DOCK7	Phosphorylation	T907	-0.613	-0.434	_SLS(ph)NSNPDISGT(ph)PTSPDDEVR_
DOCK7	Phosphorylation	S910	-0.268	-0.548	_SLS(ph)NSNPDISGTPTS(ph)PDDEVR_
DOCK7	Phosphorylation	S929	0.481	0.241	_SNS(ph)WVNTGGPK_
DOCK7	Phosphorylation	S946		0.288	_AAPWGSNPS(ph)PSAESTQAMDR_
DOCK7	Phosphorylation	S1383	1.049	1.056	_MNS(ph)LTFK_
DOCK7	Phosphorylation	S1432	0.204	0.208	_SPS(ph)GSAFGSQENLR_
DOCK7	Phosphorylation	S1438	-0.052	-0.235	_SPSGSAFGS(ph)QENLR_
DOCK7	Ubiquitylation	K2080	0.971		_NK(gl)SLIGPDQKEYQR_
DOCK7	Ubiquitylation	K2088	0.652		_SLIGPDQK(gl)EYQR_
DOCK7	Phosphorylation	S2129		0.410	_AVLPVTCHRDS(ph)FSR_
EPB41L2	Ubiquitylation	K12	1.250	1.003	_(ac)TTEVGSVSEVK(gl)K_
EPB41L2	Ubiquitylation	K13	1.753		_TTEVGSVSEVKK(gl)_
EPB41L2	Ubiquitylation	K24	0.972	0.412	_DSSQLGTDATK(gl)EKPK_
EPB41L2	Phosphorylation	S38	-0.631	-0.778	_EVAENQQNQS(ph)SDPEEEKGSQPPPAAESQSSLR_
EPB41L2	Phosphorylation	S39	-0.631	-0.778	_EVAENQQNQS(ph)SDPEEEKGSQPPPAAESQSSLR_
EPB41L2	Phosphorylation	S55	-0.274	-0.402	_GSQPPPAAES(ph)QSSLRR_
EPB41L2	Phosphorylation	S57	-0.615		_EVAENQQNQSSDPEEEKGSQPPPAAESQS(ph)SLRR_
EPB41L2	Phosphorylation	S58	-0.353	-1.316	_GSQPPPAAESQSS(ph)LRR_
EPB41L2	Ubiquitylation	K84	1.674		_K(gl)QK(gl)SYTLVVAK_
EPB41L2	Ubiquitylation	K86	0.958	3.487	_QK(gl)SYTLVVAK_
EPB41L2	Phosphorylation	S87	0.973	1.442	_QKS(ph)YTLVVAK_
EPB41L2	Phosphorylation	T89		0.996	_KQKSYT(ph)LVVAK_
EPB41L2	Ubiquitylation	K126	1.508	1.259	_QAK(gl)GDAEEMAQK_
EPB41L2	Ubiquitylation	K135		1.116	_GDAEEMAQK(gl)K_
EPB41L2	Ubiquitylation	K136	1.348	1.116	_GDAEEMAQKK(gl)_
EPB41L2	Ubiquitylation	K160	0.320		_EEKPSVSK(gl)VEMQPTELVSK_
EPB41L2	Ubiquitylation	K171	0.192	1.031	_VEMQPTELVSK(gl)ER_
EPB41L2	Ubiquitylation	K178	0.801		_VK(gl)ETQEDKLEGGAAK_
EPB41L2	Ubiquitylation	K184	1.056		_VKETQEDK(gl)LEGGAAK_
EPB41L2	Ubiquitylation	K195	1.159	0.966	_ETK(gl)EVQTNELK_
EPB41L2	Ubiquitylation	K203	1.218	1.588	_EVQTNELK(gl)AEK_
EPB41L2	Ubiquitylation	K206	1.268	1.978	_EVQTNELKAEK(gl)ASQK_
EPB41L2	Ubiquitylation	K221	1.602	1.745	_TVQCK(gl)VTLLDGTEYSCDLEK_
EPB41L2	Ubiquitylation	K374	0.322		_ELEEK(gl)VAELHK_
EPB41L2	Phosphorylation	S386	0.306	0.192	_GLS(ph)PAQADSQFLENAK_
EPB41L2	Ubiquitylation	K399	0.325		_GLSPAQADSQFLENAK(gl)R_
EPB41L2	Phosphorylation	S499	-0.659	-0.888	_LVS(ph)PEQPPK_
EPB41L2	Phosphorylation	S550	-0.082	0.432	_S(ph)LDGAPIGVM(ox)DQSLM(ox)K_
EPB41L2	Phosphorylation	S598	0.446	0.515	_EVRS(ph)PTKAPHLQLIEGK_
EPB41L2	Phosphorylation	T600	0.196	1.031	_EVRSPT(ph)KAPHLQLIEGK_
EPB41L2	Ubiquitylation	K601	0.190		_SPTK(gl)APHLQLIEGK_
EPB41L2	Ubiquitylation	K611	0.767		_APHLQLIEGK(gl)K_
EPB41L2	Ubiquitylation	K612	0.767		_APHLQLIEGK(gl)K_
EPB41L2	Phosphorylation	S614	1.409	0.697	_NS(ph)LRVEGDNIYVR_
EPB41L2	Ubiquitylation	K623	1.098		_SSHETLNIVEEK(gl)K_
EPB41L2	Phosphorylation	S647		0.292	_HQAS(ph)ISELKR_
EPB41L2	Ubiquitylation	K652	0.911	1.473	_HQASISELK(gl)R_
EPB41L2	Phosphorylation	S676	0.385		_ITPLS(ph)LQTQGSSHETLNIVEEK_
EPB41L2	Phosphorylation	T679	0.261		_ITPLSLQT(ph)QGSSHETLNIVEEK_
EPB41L2	Phosphorylation	S683	0.419	0.437	_ITPLSLQTQGSS(ph)HETLNIVEEK_
EPB41L2	Phosphorylation	T686		0.393	_ITPLSLQTQGSSHET(ph)LNIVEEK_
EPB41L2	Phosphorylation	S715	0.054	0.619	_EIS(ph)PGSGPGEIR_
EPB41L2	Phosphorylation	S718	-0.336	-0.512	_EISPGS(ph)GPGEIR_
EPB41L2	Ubiquitylation	K892	0.014	0.122	_TEISTK(gl)EVPIVQTETK_
EPB41L2	Ubiquitylation	K946	0.682		_TVK(gl)GGISETR_
GPS1	Ubiquitylation	K177		-0.421	_ALLK(gl)LEK_
GPS1	Ubiquitylation	K186	-0.059	0.041	_LDTDLK(gl)NYK_
GPS1	Ubiquitylation	K189	-0.352	-0.135	_NYK(gl)GNSIK_
GPS1	Ubiquitylation	K194	0.155	-0.182	_GNSIK(gl)ESIRR_
GPS1	Ubiquitylation	K283	0.835	0.572	_DSQTQAILTK(gl)LK_
GPS1	Ubiquitylation	K372		-0.090	_FYESK(gl)YASCLK_
GPS1	Ubiquitylation	K457	-0.226	-0.201	_VDSHSK(gl)ILYAR_
GPS1	Ubiquitylation	K473	-0.128	0.230	_STTFEK(gl)SLLMGK_
GPS1	Ubiquitylation	K479		0.097	_SLLMGK(gl)EFQR_
GPS1	Ubiquitylation	K502	-0.539	-1.230	_NQIHVK(gl)SPPREGSQGELTPANSQSR_
GPS1	Phosphorylation	S503		-0.084	_NQIHVKS(ph)PPR_
GPS1	Phosphorylation	S509	0.192	0.433	_EGS(ph)QGELTPANSQSR_
GPS1	Phosphorylation	T514	0.479	0.814	_EGSQGELT(ph)PANS(ph)QSR_
GPS1	Phosphorylation	S518		3.914	_EGSQGELT(ph)PANS(ph)QSR_
GRB2	Ubiquitylation	K10	0.146		_YDFK(gl)ATADDELSFK_
GRB2	Ubiquitylation	K20	-0.078		_ATADDELSFK(gl)R_
GRB2	Ubiquitylation	K69	-0.362	0.641	_AK(gl)AEEMLSK_
GRB2	Ubiquitylation	K76	0.754		_AEEMLSK(gl)QR_
GRB2	Ubiquitylation	K109	0.381	-0.002	_FGNDVQHFK(gl)VLR_
HSP90AB1	Ubiquitylation	K64	0.829	-0.090	_YESLTDPSK(gl)LDSGKELK_
HSP90AB1	Ubiquitylation	K69	0.661	0.380	_LDSGK(gl)ELK_
HSP90AB1	Ubiquitylation	K72	-1.242	-0.130	_ELK(gl)IDIIPNPQER_
HSP90AB1	Phosphorylation	S226	0.404	0.704	_EKEIS(ph)DDEAEEEK_
HSP90AB1	Phosphorylation	S255	0.525	0.628	_IEDVGS(ph)DEEDDSGKDKK_
HSP90AB1	Phosphorylation	S261	0.520	0.624	_IEDVGSDEEDDS(ph)GKDK_
HSP90AB1	Ubiquitylation	K347	0.110		_RAPFDLFENK(gl)K_
HSP90AB1	Ubiquitylation	K348	-0.096		_RAPFDLFENKK(gl)_
HSP90AB1	Ubiquitylation	K428	0.308		_K(gl)FYEAFSK_
HSP90AB1	Ubiquitylation	K435	0.847	0.933	_FYEAFSK(gl)NLK_
HSP90AB1	Ubiquitylation	K438	1.021	-0.058	_NLK(gl)LGIHEDSTNR_
HSP90AB1	Ubiquitylation	K481	0.811		_MKETQK(gl)SIYYITGESK_
HSP90AB1	Ubiquitylation	K491	0.982	1.512	_SIYYITGESK(gl)EQVANSAFVER_
HSP90AB1	Ubiquitylation	K531	0.745	1.350	_EFDGK(gl)SLVSVTK_
HSP90AB1	Ubiquitylation	K559	0.847	1.549	_AK(gl)FENLCK_
HSP90AB1	Ubiquitylation	K565	-0.066		_FENLCK(gl)LMK_
HSP90AB1	Ubiquitylation	K573	0.243	0.360	_EILDK(gl)KVEK_
HSP90AB1	Ubiquitylation	K574	0.241	0.550	_EILDKK(gl)VEK_
HSP90AB1	Ubiquitylation	K623	0.520	1.081	_DNSTMGYM(ox)MAK(gl)K_
HSPA5	Ubiquitylation	K81		-0.455	_LIGDAAK(gl)NQLTSNPENTVFDAK(gl)R_
HSPA5	Ubiquitylation	K96	-0.392	-0.109	_NQLTSNPENTVFDAK(gl)R_
HSPA5	Ubiquitylation	K118		0.783	_FLPFK(gl)VVEK_
HSPA5	Ubiquitylation	K340		0.743	_STMK(gl)PVQK_
HSPA5	Ubiquitylation	K352	-0.469	0.822	_VLEDSDLK(gl)K_
HSPA5	Ubiquitylation	K353	-0.469		_VLEDSDLK(gl)K_
HSPA5	Ubiquitylation	K447		3.097	_NTVVPTKK(gl)_
HSPA5	Ubiquitylation	K523	-0.120	0.631	_NK(gl)ITITNDQNR_
HSPA6	Ubiquitylation	K359	0.339		_LLQDFFNGK(gl)ELNK_
MYH9	Ubiquitylation	K66	0.545		_VK(gl)VNKDDIQK_
MYH9	Ubiquitylation	K403	0.390	0.869	_DYVQK(gl)AQTK_
MYH9	Ubiquitylation	K682	-0.508		_AGK(gl)LDPHLVLDQLR_
MYH9	Ubiquitylation	K760	0.409	0.964	_IGQSK(gl)VFFR_
MYH9	Ubiquitylation	K821	-0.339		_NCAAYLK(gl)LR_
MYH9	Ubiquitylation	K856	-1.336		_EEELVK(gl)VR_
MYH9	Ubiquitylation	K860	-0.570	0.212	_VREK(gl)QLAAENR_
MYH9	Ubiquitylation	K1274	0.036		_VRTELADK(gl)VTK_
MYH9	Ubiquitylation	K1277	0.081		_TELADKVTK(gl)_
MYH9	Ubiquitylation	K1413	0.288		_VAAYDKLEK(gl)TK_
MYH9	Ubiquitylation	K1415		0.790	_VAAYDKLEKTK(gl)_
MYH9	Phosphorylation	S1943	0.168	0.290	_KGAGDGS(ph)DEEVDGKADGAEAK_
NCKIPSD	Phosphorylation	T121	0.227		_RGPSASSVAVM(ox)TSST(ph)SDHHLDAAAAR_
NCKIPSD	Phosphorylation	T180	-1.614	-1.580	_RAAPT(ph)TPPPPVK_
NCKIPSD	Phosphorylation	T181	-1.595	-1.580	_RAAPT(ph)TPPPPVK_
PLCG1	Ubiquitylation	K300		8.031	_DLK(gl)NMLSQVNYR_
PLCG1	Ubiquitylation	K348		-0.219	_SLMYSAQK(gl)TMDLPFLEASTLR_
PLCG1	Ubiquitylation	K552		-0.355	_NMAQYFK(gl)K_
PLCG1	Ubiquitylation	K553		-0.355	_NMAQYFK(gl)K_
PLCG1	Ubiquitylation	K1063	0.864	0.355	_LTEGK(gl)IMER_
PLCG1	Phosphorylation	S1370	0.475	0.515	_AREGS(ph)FESR_
STOML2	Ubiquitylation	K222		-0.107	_ESAINVAEGKK(gl)_
STOML2	Phosphorylation	T327	-0.188	-0.227	_APVPGT(ph)PDSLSSGSSR_
WDR6	Ubiquitylation	K343		0.683	_GLGVSALCFK(gl)SR_
WDR6	Phosphorylation	S545		0.380	_AGAGAPVVGS(ph)GSSGGGNAFTGLGPVSTLPSLHGK_
WDR6	Ubiquitylation	K708	-0.627	-0.069	_EITCVK(gl)R_
WDR6	Ubiquitylation	K855	0.268	-0.051	_MVK(gl)VDPETR_
WDR6	Ubiquitylation	K910	-0.462		_ILQLLAETFHHK(gl)R_