RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPIE	2	-2.470	3.680		2.485	0.018	1.294	0.696
COX7A2L	2	2.010	-0.800				0.968	1.562
ECI1	2	1.020	-0.850		2.969	-2.449	1.550	1.127
AK2	1	0.380	-0.820		1.981		0.248	-0.715
CSDE1	1	0.850	-0.360	0.302	-1.033	-0.820	-0.426	-0.036
ALDH18A1	1	-1.600	2.800	0.974	0.304	-0.876	0.434	0.463
ACADVL	1	-2.840	5.470		-0.231	-0.461	0.539	0.664
HADHA	1	-1.770	3.360	0.007	-0.956	-0.181	0.499	0.477
CHCHD3	1	-0.340	0.430				0.065	0.055
CHCHD3	1	-0.340	0.430
ATP5B	1	2.320	-1.410	0.568	0.424	-1.201
SOD2	1	-0.340	0.140		2.161		-0.330
COX7A2	1	-0.430	0.430				0.943	2.309
NNT	1	-1.550	3.290				0.491	0.403
ABCD3	1	0.430	-0.210				0.177	0.367
ABCD3	1	0.430	-0.210
MARC2	1	-1.780	3.790				-0.468	-0.400
MARC2	1	-1.780	3.790
NDUFA8	1	0.870	-0.830	-0.305			-0.739	-0.548
GOT2	1	0.300	-0.690
GOT2	1	0.300	-0.690		2.371	-3.377	1.219	0.447
ROMO1	1	2.470	-1.150				-1.462
TRAP1	1	2.490	-0.940	1.091	1.105	-1.705	1.051	0.619
TST	1	2.640	-1.130		0.425		-0.504
YME1L1	1	-2.100	3.750				-0.237	-0.019
HADH	1	-0.250	-0.080		2.056		0.819	0.176
PSEN2	1	-1.820	3.280
SLC25A4	1	0.410	-0.470
SLC25A4	1	0.410	-0.470				0.878	0.610
SLC25A6	1	0.700	-1.050	0.334	2.424
SFXN2	1			-1.247			1.743
AIFM1	1	1.570	0.130	0.210	0.652	-1.014	0.280	0.386
CPT2	1	-0.880	2.130	-0.156			1.567	1.079
SLC25A46	1	1.470	-1.240
UQCRQ	1	-2.130	4.340				0.883	0.707
ACAA2	1	-0.910	0.860	0.237	1.891	-1.731	0.599	-0.027
NDUFS5	1	2.110	-0.840				0.239	0.358
SLC25A4	1	0.410	-0.470	0.334	2.424
ETFDH	1	2.210	-1.290				0.855	0.214
IDH2	1	0.090	-0.520		0.923	-2.210	2.164	1.203
SHMT2	1	-0.540	1.300	0.878	1.600	-2.560	0.964	0.784
NDUFA12	1	-1.580	2.730				0.363	0.265
ABCB8	1	2.080	-1.250
VDAC1	1	-1.570	2.490		1.900	-1.029
VDAC1	1	-1.570	2.490	0.739
SLC25A13	0	0.700	-0.680	0.224			0.187	0.344
HCCS	0	-0.180	-0.210				0.095	0.087
SLC25A5	0	1.020	-0.380	0.159	1.543	-0.331
PRKAR2B	0	-0.290	0.380
DNAJC11	0	0.590	-0.120				0.098	0.077
MGST1	0	-0.160	0.420				-0.611
UQCRC1	0	-0.810	1.500	1.170
TTC19	0	1.190	-0.550	-0.626
SLC25A39	0	0.210	-0.460
COX15	0	0.370	-0.560				0.378	0.563
CPS1	0	-0.030	-0.030
NDUFS1	0	-0.550	0.770	0.388	-0.330	-1.498	0.368	0.186
NDUFB4	0	-0.070	-0.540	-0.250			-0.592	-0.035
FECH	0	-0.500	0.450		-0.388	-0.516		-0.216
ALDH3A2	0	1.420	0.020	0.189	-0.686	-0.332	0.525	-0.106
SDHA	0	1.350	-1.030	0.223			0.787	0.745
SDHA	0	1.350	-1.030	0.602	0.333	-0.951	0.718	0.496
ACAT1	0	-0.180	0.310	-0.044	0.452	-0.353	0.411	0.354
SLC25A3	0	-1.200	1.860	0.627	1.557	-0.244	0.561	0.482
MCCC1	0	0.410	-0.310	-0.873			0.094	0.228
PSEN1	0	0.930	-1.110
CPOX	0	0.250	-0.480		0.367	-0.116	0.516	-0.227
NOA1	0	-1.290	1.800		0.622	-0.300	0.329
SLC25A24	0	-0.090	0.160				1.007	0.896
PGS1	0	-0.660	0.350
L2HGDH	0	1.410	-0.940				0.100	-0.055
CRLS1	0	-0.260	0.430
CRAT	0	-0.500	-0.480					0.082
ATP5D	0	-0.180	0.130				0.149	0.224
NDUFB7	0	0.910	-0.950				-0.061	0.245
TIMM13	0	-1.500	2.170	-0.455	0.278		-0.295	-0.531
TOMM22	0	-0.880	0.940
TOMM22	0	-0.880	0.940	-0.788
CYB5R3	0	0.070	-0.120	0.487			0.294	0.404
SAMM50	0	-1.060	1.380				0.426	0.365
SAMM50	0	-1.060	1.380				0.723	0.422
SLC25A17	0	0.570	-0.020				1.280	0.162
TIMM9	0	-0.330	-0.280				0.736	0.272
CDS2	0	0.520	-0.640				-0.234	-0.398
SLC25A14	0	-0.730	0.860				0.639
DHODH	0	-0.520	0.170				-1.249	-0.292
CYB5B	0	1.670	-0.530
NME4	0	-0.090	0.400				0.563	0.436
TIMM44	0			1.205	0.478	-1.251	0.854	0.461
TIMM50	0	0.710	-0.640	0.428	-0.608	-0.459	-1.171	-0.634
GCDH	0	1.160	-0.710				-0.423	-0.222
OSTC	0	0.500	-0.570				-0.423	-0.222
PMPCB	0	-0.260	-0.100
PMPCB	0	-0.260	-0.100	-0.123			-0.081	0.444
PMPCB	0	-0.260	-0.100		-0.029	-1.280
MICU1	0	0.400	-0.230
SLC25A11	0	0.780	-0.330	0.195			0.474	0.294
MTCH2	0	0.530	-0.190				-0.462	0.827
MTCH2	0	0.530	-0.190				0.089	-0.012
PTPMT1	0	0.090	0.270				0.126	-0.623
NDUFS8	0	0.480	0.100	0.556			0.300	0.534
COX6A1	0	-0.090	0.070					0.157
GPD2	0	-0.420	0.270	-0.375			0.478	0.358
NDUFS7	0	1.220	-0.670	-0.853			-0.390	-1.647
NDUFS7	0	1.220	-0.670		0.036	-0.063
SLC25A12	0	-0.350	0.780	-0.087			0.455	0.279
ATP5F1	0						0.721	0.419
SDHB	0	-0.720	0.810	-0.156	-0.332	-1.201	0.467	0.434
NDUFB3	0	0.030	0.250				0.049	0.067
NDUFA1	0	-0.970	0.750
SLC25A19	0	-1.090	1.490				0.650	0.106
COX6B1	0	0.040	0.480				0.423
MPST	0	-0.290	0.000		1.318
NDUFA5	0	1.050	-0.770	0.227	0.106	-0.698	0.331	-0.137
NDUFA10	0	-0.010	-0.040	-0.338			0.377	0.103
NDUFA10	0	-0.010	-0.040		-0.348
SCO2	0	1.270	-0.340		-0.179	0.206	-0.289	-0.057
COX4I1	0	-0.180	0.210	-0.141			0.051	-0.199
ABCB7	0	-1.290	2.020				0.257	0.214
CKMT2	0	-0.470	0.280	-1.264	-0.904		-0.111	0.134
LGALS3	0	0.430	-0.510		-0.143	-1.425
IMMT	0						-1.532	-0.694
IMMT	0						0.509	0.394
ERAL1	0	1.440	-1.020		-0.318	-0.254	0.063	-0.374
SCO1	0	0.020	0.360				0.240	-0.904
TIMM10	0	-0.090	-0.490
COQ10A	0	-1.380	0.990
ABCB10	0	-0.200	0.630				0.322	0.398
NDUFB5	0	1.580	-0.160	-1.253			0.429	1.250
UQCC2	0	1.080	-0.800				1.100
MTCH1	0	0.480	-0.130				-0.093	0.168
HADHB	0	1.190	-0.950	0.120	-0.958	-0.345	0.537	0.132
NDUFA9	0	0.390	-0.190	0.726			-0.609	0.138
POLG	0	1.190	-0.550		-1.116		-0.380	0.081
UQCRC2	0	-1.200	1.760	1.190			0.712	0.578
NDUFB10	0	-0.540	0.240	0.655			-0.439	0.217
AFG3L2	0	-0.300	0.740		-0.985	-0.341	0.489	0.505
MPC2	0	0.990	-0.260				-0.293	-0.730
SDHC	0	0.700	-0.920				0.734
HSPD1	0	1.020	-0.650	1.151	0.719	-0.757
SLC25A26	0	0.020	-0.790
OCIAD2	0	-0.200	-0.110				0.234	-0.736
NDUFS6	0	-1.180	1.230				0.083	0.081
HIGD2A	0	0.080	0.890				-3.305
NDUFB11	0	-0.140	0.880				-0.163	0.135
NDUFB9	0	1.320	-1.130				-0.198	-0.162
SLC25A25	0	-0.380	0.270
MTG1	0	-0.570	1.030
TIMM8B	0	0.900	-0.950	0.667
NDUFC2	0	0.170	-0.110				-1.212	-0.980
SLC25A31	0	0.660	-0.130				0.878	0.610
GUF1	0	0.790	-0.690				-0.463	-0.009
ATP5A1	0	-0.100	0.190	0.149	0.419	-0.743
APOOL	0	-0.340	0.630				-0.162	-0.556
OXA1L	0	-0.020	0.200				0.321	0.047
MCU	0	0.220	-0.400				0.109	0.653
UQCRB	0	0.760	-0.590				0.932	0.013
EXOG	0	0.140	-0.220
MRPL17	0	-0.760	2.140		-0.280	-0.223	-0.565
NDUFS2	0	0.150	0.060	0.489	-0.323	-1.479
CHCHD6	0	0.110	-0.510					-0.591
ATAD3B	0	-0.460	-0.470	-0.370			0.372	0.190
ATAD3B	0	-0.460	-0.470				0.140	-0.015
ATAD3B	0	-0.460	-0.470		0.424	0.052
NDUFV3	0	0.760	-0.640
FDXR	0	-1.170	1.420				1.422
RP3-365I19	0
SRGAP2	0
SUCLG1	0	1.830	-0.660	-0.333			0.820	-0.251
SLC9B2	0	-0.140	-0.400
NDUFS4	0	0.190	-0.590				-0.148	-0.106
SFXN1	0	0.500	0.440	0.015			0.380	0.291
COX6C	0	-1.210	1.800				-0.502	0.239
NDUFB6	0	-1.020	1.120					-0.183
STOML2	0	-1.000	1.080	0.526			0.025	-0.128
ATP5C1	0	0.380	-0.440	0.381	-0.025	-0.749	0.379	0.339
VDAC2	0	-0.270	0.880		1.276	-0.710
GHITM	0						0.238	0.984
PMPCA	0	-0.140	0.680		0.865	-0.098	0.972	0.919
CLPX	0	-0.810	0.690	0.324	0.554	-0.550	0.057	-0.027
PHB	0	-1.260	1.640	-0.429	0.649	-1.697
NDUFV1	0	-0.620	0.680				-0.032	0.387
ATP5H	0	0.790	-0.660				-0.180	-0.220
LETM1	0	0.530	-0.310	0.287	0.893	-0.656	0.206	0.348
ATP5I	0	0.040	1.110				-1.015
UQCRFS1	0	0.580	-0.380
UQCRFS1	0	0.580	-0.380		0.455	-1.390
APEX2	0	-0.680	0.420
SPNS1	0	-0.430	0.900
TMEM126A	0	0.130	-0.220				0.225	-0.144
BCL2L1	0
CYCS	0	-0.020	-0.350				0.711	0.320
MTX1	0						-0.307	0.032
PC	0	-0.260	-0.650	-0.229			0.111	0.517
UQCRH	0
USMG5	0	1.150	-0.700	0.025			-0.026
NDUFA11	0	0.800	-0.540				0.209	-0.530
PARL	0	-0.030	1.210				0.103	-0.032
TMEM70	0	-0.480	1.390				1.339	0.192
TYMS	0	-1.190	1.570
SLC25A22	0	-0.560	0.250	-1.206			0.257	-0.279
NDUFAF3	0	0.490	-0.400	0.114			-0.413	-1.265
NDUFV2	0	1.600	-1.130				0.165	0.361
SLC25A20	0	0.510	-0.140				0.468
DHFRL1	0	0.230	-0.640	-0.938				-0.400
COX5A	0	0.630	-0.700				-0.118	0.366
CYC1	0	0.160	-0.180				0.985	0.521
FAHD1	0	1.020	-0.840				-0.517	-0.048
HIGD1A	0	0.710	-0.830				-0.108
SLC25A18	0	1.120	-0.380	-1.206			0.257	-0.279
SLC25A21	0	0.410	-0.140				0.599	-0.267
SLC25A10	0	-0.310	0.760		-0.452	-0.345	0.324	0.222
SLC25A10	0	-0.030	0.190		-0.452	-0.345	0.324	0.222
SLC25A10	0	-0.310	0.760				0.553	1.092
SLC25A10	0	-0.030	0.190				0.553	1.092
NDUFB1	0	0.580	-0.030				-0.368
UQCR10	0	-0.360	0.450				0.768	0.390
NIPSNAP1	0	-1.030	0.980	0.793	-0.869	-0.958	0.711	0.588
NDUFA13	0	1.140	-0.760	-1.093			-0.874	-0.460
YJEFN3	0			-1.093			-0.874	-0.460
NDUFA4	0	1.070	-0.860	0.219			0.286
SRC	0	0.050	0.470	-0.031
ACSL5	0	0.430	-0.550	-0.319			0.348	-0.094
GSTK1	0	0.050	-0.370	-0.002			0.473	0.634
ATAD3A	0	0.850	-0.370	-0.370			0.372	0.190
ATAD3A	0	0.850	-0.370		0.424	0.052
MT-CO2	0			-1.117			-0.009	-0.005
MT-ND2	0						0.673	0.332
MT-ND5	0						0.482	0.642
OPA1	0	-0.940	1.320		0.057	-0.292
OPA1	0	-0.940	1.320	0.962			0.828	0.737
MT-ND4	0						-0.031	0.049
MT-ND1	0						0.684	0.420
MT-ATP6	0						0.710	0.570
MT-CO3	0						-0.138	-0.132
DNAJC19	0	1.030	-1.100				-0.751
NDUFS3	0	0.810	-0.670	0.563	-0.004	-0.643	0.049	-0.093
CKMT1A	0			-1.264	-0.904		-0.111	0.134
COX6A1P2	0							0.157
CKMT1B	0	-0.100	-0.130	-1.264	-0.904		-0.111	0.134
ATP5J2	0	-0.450	0.140	0.429	-0.169	-0.273	-0.094	-0.322
ATP5J2	0	-0.450	0.140				-0.905
ATP5O	0	0.140	-0.360	-0.208			0.202	0.472
MTFP1	0						0.733	0.636

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ABCB7	Ubiquitylation	K608	0.115	0.132	_GLK(gl)LSGGEK_
ABCB8	Ubiquitylation	K247		-0.161	_QDITFFDANK(gl)TGQLVSR_
ABCB8	Ubiquitylation	K573		-0.465	_FGK(gl)LEASDEEVYTAAR_
ABCD3	Ubiquitylation	K6	-0.659	-0.529	_AAFSK(gl)YLTAR_
ABCD3	Ubiquitylation	K39	-1.169		_ALGLHGKK(gl)_
ABCD3	Ubiquitylation	K260	1.051	0.695	_MTITEQK(gl)YEGEYR_
ABCD3	Ubiquitylation	K533	2.395	-0.758	_DQVIYPDGREDQK(gl)R_
ACSL5	Ubiquitylation	K386		-0.432	_IFGQANTTLK(gl)R_
ACSL5	Ubiquitylation	K521		-2.563	_GPNVFQGYLK(gl)DPAK_
AFG3L2	Ubiquitylation	K208	-1.392		_GVVDRLEVVNK(gl)R_
AIFM1	Ubiquitylation	K111	1.676		_ISGLGLTPEQKQK(gl)_
AIFM1	Ubiquitylation	K518	-0.545	-0.262	_ATAQDNPK(gl)SATEQSGTGIR_
AK2	Ubiquitylation	K28	-2.435	-1.363	_AVLLGPPGAGK(gl)GTQAPR_
AK2	Ubiquitylation	K63		-0.244	_AMVASGSELGKK(gl)_
AK2	Ubiquitylation	K65		-0.229	_LK(gl)ATMDAGK_
APEX2	Ubiquitylation	K371	0.281	-0.420	_VQTCQNK(gl)AQVR_
APEX2	Ubiquitylation	K482	-0.126		_TVK(gl)KPGPNLGR_
ATP5A1	Ubiquitylation	K161		-1.608	_VVDALGNAIDGK(gl)GPIGSK_
ATP5A1	Ubiquitylation	K175		-0.184	_VGLK(gl)APGIIPR_
ATP5A1	Ubiquitylation	K261		-0.997	_STVAQLVK(gl)R_
ATP5B	Ubiquitylation	K55		-1.344	_DYAAQTSPSPK(gl)AGAATGR_
ATP5B	Ubiquitylation	K426		-0.601	_GVQK(gl)ILQDYK_
ATP5B	Phosphorylation	S465		-1.223	_FLS(ph)QPFQVAEVFTGHMGK_
ATP5C1	Ubiquitylation	K29		-0.071	_NMATLK(gl)DITR_
ATP5I	Ubiquitylation	K34	-2.285		_YNYLK(gl)PR_
ATP5O	Ubiquitylation	K84	-1.113	1.074	_VAASVLNPYVK(gl)R_
BCL2L1	Ubiquitylation	K87	0.026		_EVIPMAAVK(gl)QALR_
CDS2	Phosphorylation	S21	0.210	-0.130	_VAHEPVAPPEDKES(ph)ESEAK_
CDS2	Phosphorylation	T31	-0.180	-0.125	_VDGET(ph)ASDSESRAESAPLPVSADDTPEVLNR_
CDS2	Phosphorylation	S33	0.053	-0.557	_VDGETAS(ph)DSESRAESAPLPVSADDTPEVLNR_
CDS2	Phosphorylation	S41		-1.217	_AES(ph)APLPVSADDTPEVLNR_
CHCHD3	Phosphorylation	S46		1.606	_S(ph)QRYSGAYGASVSDEELKR_
CHCHD3	Phosphorylation	S50	0.558	0.865	_YS(ph)GAYGASVSDEELK_
CHCHD3	Ubiquitylation	K170	-0.125	0.892	_VTTEQYQK(gl)AAEEVEAK_
CKMT1A	Ubiquitylation	K291		0.451	_GLK(gl)EVER_
CKMT1B	Ubiquitylation	K291		0.451	_GLK(gl)EVER_
CKMT2	Ubiquitylation	K291		0.451	_GLK(gl)EVER_
COQ10A	Ubiquitylation	K124		-0.160	_EFVPWCKK(gl)_
COX6B1	Ubiquitylation	K13	-1.330	0.150	_NYK(gl)TAPFDSR_
COX6B1	Ubiquitylation	K47	-0.072		_AMTAK(gl)GGDISVCEWYQR_
CPS1	Phosphorylation	S1278	-0.511	-1.077	_ASRSFPFVS(ph)K_
CPT2	Ubiquitylation	K189		-0.819	_SDTITFK(gl)R_
CPT2	Ubiquitylation	K510		-0.730	_TETIRPASVYTK(gl)R_
CRLS1	Ubiquitylation	K225		-0.176	_TLAK(gl)YFNPCYATAR_
CSDE1	Ubiquitylation	K127	-1.399	-0.753	_TGK(gl)PIAVK_
CSDE1	Ubiquitylation	K132	-0.229		_TGKPIAVK(gl)LVK_
CSDE1	Ubiquitylation	K137	-0.951		_IK(gl)QEILPEER_
CSDE1	Ubiquitylation	K285	-0.577	1.525	_NGK(gl)EVATDVR_
CSDE1	Ubiquitylation	K323	-2.005	-1.398	_VPSK(gl)NQNDPLPGR_
CSDE1	Ubiquitylation	K334	-0.130		_IK(gl)VDFVIPK_
CSDE1	Ubiquitylation	K353	0.281		_SK(gl)VTLLEGDHVR_
CSDE1	Ubiquitylation	K410	0.593		_DGFGFIK(gl)CVDR_
CSDE1	Phosphorylation	S560	-0.057	0.159	_LLGRNS(ph)NSK_
CSDE1	Ubiquitylation	K694	0.626		_GDCLQK(gl)GESVK_
CSDE1	Ubiquitylation	K743	-1.247		_DQFGFINYEVGDSKK(gl)_
CSDE1	Ubiquitylation	K775	-0.518	1.078	_TGK(gl)CSACNVWR_
CSDE1	Ubiquitylation	K789	-1.573		_VCEGPK(gl)AVAAPRPDR_
CSDE1	Ubiquitylation	K804	-0.486	-0.563	_LK(gl)NITLDDASAPR_
CYB5B	Ubiquitylation	K30	0.323	0.593	_LEEVAK(gl)R_
CYB5R3	Ubiquitylation	K42	-1.893	-1.012	_STPAITLESPDIK(gl)YPLR_
CYB5R3	Ubiquitylation	K115	-0.445	-0.904	_VYFK(gl)DTHPK_
CYB5R3	Ubiquitylation	K120	-1.238		_DTHPK(gl)FPAGGK_
CYB5R3	Ubiquitylation	K163	0.544	-0.128	_FAIRPDK(gl)K_
CYB5R3	Ubiquitylation	K164	-0.539	-1.580	_K(gl)SNPIIR_
CYC1	Ubiquitylation	K50		-1.489	_TPQAVALSSK(gl)SGLSR_
CYCS	Ubiquitylation	K40		-2.265	_K(gl)TGQAPGYSYTAANK(gl)NK_
CYCS	Ubiquitylation	K54	-0.872	-1.922	_K(gl)TGQAPGYSYTAANK(gl)NK_
CYCS	Ubiquitylation	K56	-0.872	-1.922	_TGQAPGYSYTAANKNK(gl)_
CYCS	Ubiquitylation	K101		-1.859	_ADLIAYLKK(gl)_
DHFRL1	Ubiquitylation	K55		-0.547	_QNLVIMGK(gl)K_
DHFRL1	Ubiquitylation	K56		-0.219	_QNLVIMGK(gl)K_
DHFRL1	Ubiquitylation	K81		-1.954	_ELK(gl)EPPQGAHFLSR_
DHFRL1	Ubiquitylation	K99		-2.021	_SLDDALK(gl)LTEQPELANK_
DHFRL1	Ubiquitylation	K133	1.408		_EAM(ox)NHPGHLK(gl)LFVTR_
DHFRL1	Ubiquitylation	K158		-1.504	_YK(gl)LLPEYPGVLSDVQEEK_
DHFRL1	Ubiquitylation	K174		-2.693	_LLPEYPGVLSDVQEEK(gl)GIK_
DHODH	Ubiquitylation	K235		-0.190	_LLTK(gl)VLQER_
DNAJC11	Ubiquitylation	K31	0.122	0.166	_REASSEELK(gl)AAYR_
DNAJC11	Ubiquitylation	K83	0.888	0.877	_AIYDIYGK(gl)R_
DNAJC11	Ubiquitylation	K264		0.801	_NLDK(gl)NTVGYLQWR_
DNAJC11	Ubiquitylation	K434	0.278	0.096	_ESAATDVLQK(gl)K_
ECI1	Ubiquitylation	K288		-0.415	_DSIQK(gl)SLQMYLER_
EXOG	Ubiquitylation	K44	0.879		_KLEELK(gl)AK_
GOT2	Ubiquitylation	K321		-1.209	_TQLVSNLKK(gl)_
HSPD1	Phosphorylation	S70	0.210	0.487	_TVIIEQSWGS(ph)PK_
HSPD1	Ubiquitylation	K82	-0.300		_DGVTVAK(gl)SIDLK_
HSPD1	Ubiquitylation	K87	-0.005	0.292	_SIDLK(gl)DKYK_
HSPD1	Ubiquitylation	K130		-0.428	_EGFEK(gl)ISK_
HSPD1	Ubiquitylation	K233	0.853	0.024	_GYISPYFINTSK(gl)GQK_
HSPD1	Ubiquitylation	K292	0.339		_LK(gl)VGLQVVAVK_
MARC2	Ubiquitylation	K66		0.127	_LWIYPVK(gl)SCK_
MARC2	Ubiquitylation	K69		-0.329	_SCK(gl)GVPVSEAECTAMGLR_
MARC2	Ubiquitylation	K70		-0.329	_SCK(gl)GVPVSEAECTAMGLR_
MARC2	Ubiquitylation	K148	-1.260		_TPTTNAVHK(gl)CR_
MARC2	Ubiquitylation	K156		-0.101	_IFGLDIK(gl)GR_
MARC2	Ubiquitylation	K187		-0.504	_LVQFETNMK(gl)GR_
MICU1	Ubiquitylation	K342		0.047	_QFGGMLLAYSGVQSK(gl)K_
MICU1	Ubiquitylation	K343		0.047	_QFGGMLLAYSGVQSK(gl)K_
MICU1	Ubiquitylation	K451	-1.890	-0.478	_GLEKPK(gl)DMGFTR_
MPST	Phosphorylation	S15		0.341	_S(ph)PSVAAMASPQLCR_
MPST	Phosphorylation	S17	1.337		_SPS(ph)VAAMASPQLCR_
MPST	Ubiquitylation	K166		-1.712	_QNLPLSSGK(gl)SQPAPAEFR_
MTCH2	Ubiquitylation	K122	-1.523	-0.177	_EVSSSFDHVIK(gl)ETTR_
MTG1	Ubiquitylation	K280		-0.708	_SVAVK(gl)LGK_
MTX1	Ubiquitylation	K227	0.228	0.424	_EK(gl)YNADYDLSAR_
NDUFA1	Ubiquitylation	K64	-2.721	-0.183	_YYVSK(gl)GLENID_
NDUFA12	Ubiquitylation	K8	-2.372		_MELVQVLK(gl)R_
NDUFA13	Ubiquitylation	K22		-2.069	_VKQDMPPPGGYGPIDYK(gl)R_
NDUFA13	Ubiquitylation	K105		-1.894	_DVPDWK(gl)VGESVFHTTR_
NDUFA8	Ubiquitylation	K65	0.281	1.896	_LVNK(gl)CALDFFR_
NDUFA8	Ubiquitylation	K106	-0.122		_KQQAK(gl)FDECVLDK_
NDUFB10	Ubiquitylation	K121		-0.555	_EGQNYQQNCIK(gl)EVEQFTQVAK_
NDUFB10	Ubiquitylation	K131		-0.444	_EVEQFTQVAK(gl)AYQDR_
NDUFB4	Ubiquitylation	K5		-1.281	_(ac)SFPK(gl)YKPSSLR_
NDUFB4	Ubiquitylation	K120		-0.825	_LIQEGK(gl)LDR_
NDUFB6	Ubiquitylation	K9	-2.576	-0.600	_TGYTPDEK(gl)LR_
NDUFB6	Ubiquitylation	K54	-1.501	-0.723	_FLENK(gl)SPWR_
NDUFB7	Ubiquitylation	K81	-1.497	-0.471	_DSFPNFLACK(gl)QER_
NDUFS1	Ubiquitylation	K298		-1.134	_FAYDGLK(gl)R_
NDUFS5	Ubiquitylation	K8		0.336	_PFLDIQK(gl)R_
NDUFS5	Ubiquitylation	K88	-0.635	1.381	_DKLIK(gl)EGK_
NDUFS8	Ubiquitylation	K88		-1.865	_EPATINYPFEK(gl)GPLSPR_
NDUFV3	Phosphorylation	S448		-0.878	_M(ox)PQPS(ph)SGRESPRH_
NDUFV3	Phosphorylation	S449	-0.292		_M(ox)PQPSS(ph)GRESPRH_
NDUFV3	Phosphorylation	S453	-0.918	-0.698	_M(ox)PQPSSGRES(ph)PRH_
OCIAD2	Ubiquitylation	K41		0.915	_AEISK(gl)IMR_
OPA1	Ubiquitylation	K261		0.390	_AAGQYSTSYAQQK(gl)R_
OXA1L	Ubiquitylation	K267		0.097	_ASSEMALYQK(gl)K_
OXA1L	Ubiquitylation	K268		0.097	_ASSEMALYQK(gl)K_
OXA1L	Ubiquitylation	K403		0.452	_TVLK(gl)IPQR_
PGS1	Ubiquitylation	K152	-0.643	-0.828	_SLQAK(gl)FPSNLK_
PHB	Ubiquitylation	K83		-0.521	_NVPVITGSK(gl)DLQNVNITLR_
PHB	Ubiquitylation	K186		-0.124	_EFTEAVEAK(gl)QVAQQEAER_
PHB	Ubiquitylation	K202		0.125	_FVVEK(gl)AEQQKK_
PMPCA	Ubiquitylation	K232	-1.131	-0.941	_FCPTENVAK(gl)INR_
PMPCA	Ubiquitylation	K299		-0.658	_SVAQYTGGIAK(gl)LER_
PMPCA	Ubiquitylation	K478		-2.019	_NVKPEDVK(gl)R_
PMPCA	Ubiquitylation	K483		-1.110	_VASK(gl)MLR_
PMPCB	Ubiquitylation	K456		-1.174	_EVCTK(gl)YIYNR_
POLG	Ubiquitylation	K371		-2.064	_LYVGGPPLEK(gl)EPR_
POLG	Ubiquitylation	K990		-1.545	_AQQMYAATK(gl)GLR_
PPIE	Ubiquitylation	K190	-0.831		_KIESFGSK(gl)SGR_
PRKAR2B	Phosphorylation	T69		-0.367	_TWGDLGAAAGGGT(ph)PSK_
PRKAR2B	Phosphorylation	S114	0.366	0.525	_RAS(ph)VCAEAYNPDEEEDDAESR_
PRKAR2B	Ubiquitylation	K359	0.640		_GQYFGELALVTNK(gl)PR_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
PSEN2	Phosphorylation	S58	-0.112	-0.130	_TSLM(ox)SAES(ph)PTPR_
RP3-365I19.1-001	Ubiquitylation	K33		-0.066	_AQLTEQMK(gl)CLDQQCELR_
SCO2	Ubiquitylation	K196	-0.539	0.337	_LLGLTGSTK(gl)QVAQASHSYR_
SDHA	Ubiquitylation	K341		-1.790	_YAPVAK(gl)DLASR_
SFXN1	Ubiquitylation	K12		-1.965	_(ac)SGELPPNINIK(gl)EPR_
SFXN1	Ubiquitylation	K72		-0.590	_AK(gl)YIYDSAFHPDTGEK_
SFXN1	Ubiquitylation	K202	-2.629	0.403	_ELK(gl)VGIPVTDENGNR_
SFXN1	Ubiquitylation	K223		-0.544	_LGESANAAK(gl)QAITQVVVSR_
SFXN1	Ubiquitylation	K320		-0.374	_VYFNK(gl)GL_
SFXN2	Ubiquitylation	K52		0.008	_VMVEK(gl)SR_
SFXN2	Ubiquitylation	K72		-0.514	_MGVVPPGTQVEQLLYAKK(gl)_
SFXN2	Ubiquitylation	K202		0.812	_QQELIK(gl)GICVK_
SFXN2	Ubiquitylation	K308		0.082	_LQDTIKAK(gl)_
SHMT2	Ubiquitylation	K103	-2.726	-0.554	_YSEGYPGK(gl)R_
SHMT2	Ubiquitylation	K280		-0.564	_HADIVTTTTHK(gl)TLR_
SHMT2	Ubiquitylation	K356		1.096	_EYSLQVLK(gl)NAR_
SHMT2	Ubiquitylation	K409		0.692	_VLELVSITANK(gl)NTCPGDR_
SHMT2	Ubiquitylation	K469		-0.436	_LQDFK(gl)SFLLK_
SHMT2	Ubiquitylation	K474	-1.113	-0.594	_SFLLK(gl)DSETSQR_
SLC25A11	Ubiquitylation	K15	-0.855	0.190	_(ac)AATASAGAGGIDGK(gl)PR_
SLC25A11	Ubiquitylation	K57		0.010	_MQLSGEGAK(gl)TR_
SLC25A13	Ubiquitylation	K5		0.019	_(ac)AAAK(gl)VALTK_
SLC25A17	Ubiquitylation	K42		0.106	_LQVDEK(gl)R_
SLC25A17	Ubiquitylation	K44	-0.499		_LQVDEKRK(gl)_
SLC25A17	Ubiquitylation	K130		-0.564	_LK(gl)LQGAK_
SLC25A17	Ubiquitylation	K135		-0.478	_LQGAK(gl)FR_
SLC25A21	Ubiquitylation	K246		-1.032	_IQGPQPVPGEIK(gl)YR_
SLC25A26	Ubiquitylation	K145		-0.259	_GYK(gl)STVLR_
SLC25A3	Ubiquitylation	K304		0.004	_GSSASLVLK(gl)R_
SLC25A39	Ubiquitylation	K188		-0.136	_TK(gl)LQAQHVSYR_
SLC25A4	Ubiquitylation	K52		0.200	_QYK(gl)GIIDCVVR_
SLC25A4	Ubiquitylation	K88	-2.095		_IPK(gl)EQGVLSFWR_
SLC25A4	Ubiquitylation	K172	-0.787	0.875	_LAADVGK(gl)SGTER_
SLC25A46	Phosphorylation	S34		-0.611	_SFS(ph)TGSDLGHWVTTPPDIPGSR_
SLC25A46	Phosphorylation	T44		2.067	_SFSTGSDLGHWVT(ph)TPPDIPGSR_
SLC25A46	Phosphorylation	T45		2.006	_SFSTGSDLGHWVTT(ph)PPDIPGSR_
SLC25A46	Ubiquitylation	K256		-0.391	_VIGMGVPHSK(gl)R_
SLC25A5	Ubiquitylation	K74		0.478	_QITADK(gl)QYK_
SLC25A5	Ubiquitylation	K77		0.200	_QYK(gl)GIIDCVVR_
SLC25A5	Ubiquitylation	K88	-2.095		_IPK(gl)EQGVLSFWR_
SLC25A5	Ubiquitylation	K130	-0.918	1.293	_QIFLGGVDK(gl)R_
SLC25A5	Ubiquitylation	K172	-1.978	-0.228	_LAADVGK(gl)AGAER_
SLC25A5	Ubiquitylation	K188		0.764	_GLGDCLVK(gl)IYK_
SLC25A5	Ubiquitylation	K191		0.215	_IYK(gl)SDGIK_
SLC25A5	Ubiquitylation	K270	-2.134		_K(gl)GTDIMYTGTLDCWR_
SLC25A5	Ubiquitylation	K293	-1.774	0.323	_DEGGK(gl)AFFK_
SLC25A6	Ubiquitylation	K88	-2.095		_IPK(gl)EQGVLSFWR_
SLC25A6	Ubiquitylation	K172	-0.787	0.875	_LAADVGK(gl)SGTER_
SLC9B2	Ubiquitylation	K38	1.380	0.668	_LK(gl)GIDANEPTEGSILLK_
SLC9B2	Ubiquitylation	K53	0.948	0.472	_GIDANEPTEGSILLK(gl)SSEK_
SLC9B2	Ubiquitylation	K58	1.287		_K(gl)LQETPTEANHVQR_
SPNS1	Phosphorylation	S563	0.396	1.063	_GRS(ph)TRVPVASVLI_
SPNS1	Phosphorylation	T564		0.894	_GRST(ph)RVPVASVLI_
SRC	Phosphorylation	S17	-0.604	-0.689	_S(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR_
SRC	Phosphorylation	S75	0.060	0.331	_LFGGFNSSDTVTS(ph)PQR_
SRGAP2	Ubiquitylation	K33		-0.066	_AQLTEQMK(gl)CLDQQCELR_
SRGAP2	Ubiquitylation	K182		-0.693	_TYHM(ox)YNADSISAQSKLK(gl)_
SRGAP2	Ubiquitylation	K245		-0.743	_YTENKLK(gl)_
SRGAP2	Ubiquitylation	K381		-0.208	_LSTLK(gl)IENEEVKK_
SRGAP2	Ubiquitylation	K438		-1.020	_STVSETFMSKPSIAK(gl)R_
SRGAP2	Phosphorylation	S1053	-0.109	-0.231	_TNATS(ph)PGVNSSTS(ph)PQSTDK_
SRGAP2	Phosphorylation	S1061	-0.109	-0.174	_TNATS(ph)PGVNSSTS(ph)PQSTDK_
STOML2	Ubiquitylation	K222		-0.107	_ESAINVAEGKK(gl)_
STOML2	Phosphorylation	T327	-0.188	-0.227	_APVPGT(ph)PDSLSSGSSR_
TIMM10	Ubiquitylation	K45	-0.685		_EAELSK(gl)GESVCLDR_
TIMM10	Ubiquitylation	K81	-0.578	0.766	_LTELSMQDEELMK(gl)R_
TIMM13	Ubiquitylation	K49	-1.351		_K(gl)CIGKPGGSLDNSEQK_
TIMM50	Ubiquitylation	K167		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K168		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K353		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K354		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K434		0.302	_LAELSK(gl)SNK_
TIMM50	Ubiquitylation	K437	0.101	-0.071	_SNK(gl)QNLFLGSLTSR_
TIMM8B	Ubiquitylation	K95	0.786	1.423	_FAQIVQK(gl)GGQ_
TMEM70	Ubiquitylation	K88	-2.650	-0.519	_FLNTPSDK(gl)SEDGR_
TOMM22	Phosphorylation	S15	1.323	0.654	_AAAVAAAGAGEPQS(ph)PDELLPK_
TTC19	Ubiquitylation	K132		0.610	_LAYQTDNK(gl)K_
TTC19	Ubiquitylation	K133		0.610	_LAYQTDNK(gl)K_
TTC19	Ubiquitylation	K251	-0.967	0.519	_YLLFSK(gl)QPSQAQR_
TTC19	Ubiquitylation	K346	-0.145		_EIYQEALK(gl)QAK_
TYMS	Ubiquitylation	K99		-0.992	_GSTNAK(gl)ELSSK_
TYMS	Ubiquitylation	K104		-0.543	_ELSSK(gl)GVK_
TYMS	Ubiquitylation	K169	-0.801	-0.836	_VIDTIK(gl)TNPDDRR_
UQCRC2	Ubiquitylation	K250		-0.825	_GGLGLSGAK(gl)ANYR_
UQCRC2	Ubiquitylation	K377		-1.458	_TIAQGNLSNTDVQAAKNK(gl)_
UQCRFS1	Ubiquitylation	K110		-0.915	_RLEVLDSTK(gl)SSR_
UQCRFS1	Ubiquitylation	K172		-0.698	_LSDIPEGK(gl)NMAFK_
UQCRH	Ubiquitylation	K42	-0.522	1.440	_EQCEQLEK(gl)CVK_
USMG5	Ubiquitylation	K16		1.134	_AGPESDAQYQFTGIK(gl)K_
USMG5	Ubiquitylation	K17		0.566	_AGPESDAQYQFTGIKK(gl)_
VDAC1	Ubiquitylation	K20	0.718	0.885	_DVFTK(gl)GYGFGLIK_
VDAC1	Ubiquitylation	K61		1.135	_VTGSLETK(gl)YR_
VDAC1	Phosphorylation	S102	0.928	0.928	_LTFDSS(ph)FSPNTGKK_
VDAC1	Phosphorylation	S104	0.569	0.615	_LTFDSSFS(ph)PNTGK_
VDAC1	Phosphorylation	T107		0.493	_LTFDSSFSPNT(ph)GKK_
VDAC1	Ubiquitylation	K109	0.352		_LTFDSSFSPNTGK(gl)K_
VDAC1	Ubiquitylation	K110	0.406	0.270	_LTFDSSFSPNTGKK(gl)_
VDAC1	Ubiquitylation	K274	0.839		_NVNAGGHK(gl)LGLGLEFQA_
VDAC2	Ubiquitylation	K31	0.529		_DIFNK(gl)GFGFGLVK_
VDAC2	Ubiquitylation	K74		-0.220	_VTGTLETKYK(gl)_
VDAC2	Phosphorylation	T112	0.429		_LTFDT(ph)TFSPNTGKK_
VDAC2	Phosphorylation	S115	0.635	0.506	_LTFDTTFS(ph)PNTGK_
VDAC2	Ubiquitylation	K120		-0.029	_LTFDTTFSPNTGK(gl)K_
VDAC2	Ubiquitylation	K121	0.266	0.090	_LTFDTTFSPNTGKK(gl)_
VDAC2	Ubiquitylation	K285	0.885		_SINAGGHK(gl)VGLALELEA_
YJEFN3	Ubiquitylation	K22		-2.069	_VKQDMPPPGGYGPIDYK(gl)R_
YJEFN3	Ubiquitylation	K105		-1.894	_DVPDWK(gl)VGESVFHTTR_
YME1L1	Ubiquitylation	K370		-0.462	_FTILGGK(gl)LPK_
YME1L1	Ubiquitylation	K618		-1.934	_DAMPINK(gl)ATIMPR_