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Query: SAMM50

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SAMM50 0 2.525 -1.060 1.380 0.426 0.365
SAMM50 0 2.525 -1.060 1.380 0.723 0.422

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for SAMM50:


Pubmed-SAMM50 »
Uniprot-SAMM50 »
Biogrid-SAMM50 »
ProteomicsDB-SAMM50 »

Tumorportal-SAMM50 »
COSMIC-SAMM50 »
GenomeRNAi-SAMM50 »
Genecards-SAMM50


Protein-protein Interactions for SAMM50
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MTX2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SAMM50 Cat. description Hein, Mann, Cell 2015
Category members IP bait MTX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SAMM50
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SAMM50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SAMM50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0045040 protein import into mitochondrial outer membrane Database 0.54
Category members GO Category GO:0005741 mitochondrial outer membrane Database 0.46
Category members Pathway Pathway_9 REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 0 0.33
Category members GO Category GO:0005743 mitochondrial inner membrane Database 0.15
Category members GO Category GO:0006626 protein targeting to mitochondrion Database 0.11
Category members GO Category GO:0019867 outer membrane Database 0


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