RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CS	1	1.370	-0.830	0.982	1.925	-2.498	0.510	0.426
BCS1L	1	-1.580	2.960
BCS1L	1	-1.580	2.960				-0.251	0.013
ACO2	1	0.840	-0.860	0.064	1.695	-0.763	1.166	0.817
ATP5B	1	2.320	-1.410	0.568	0.424	-1.201
SLC25A4	1	0.410	-0.470
SLC25A4	1	0.410	-0.470				0.878	0.610
SLC25A6	1	0.700	-1.050	0.334	2.424
TOMM70A	1	-2.390	4.220				0.264	0.219
SLC25A4	1	0.410	-0.470	0.334	2.424
VDAC1	1	-1.570	2.490		1.900	-1.029
VDAC1	1	-1.570	2.490	0.739
SLC25A13	0	0.700	-0.680	0.224			0.187	0.344
TIMM13	0	-1.500	2.170	-0.455	0.278		-0.295	-0.531
TOMM22	0	-0.880	0.940
TOMM22	0	-0.880	0.940	-0.788
SAMM50	0	-1.060	1.380				0.426	0.365
SAMM50	0	-1.060	1.380				0.723	0.422
TIMM9	0	-0.330	-0.280				0.736	0.272
TIMM44	0			1.205	0.478	-1.251	0.854	0.461
TIMM50	0	0.710	-0.640	0.428	-0.608	-0.459	-1.171	-0.634
PMPCB	0	-0.260	-0.100
PMPCB	0	-0.260	-0.100	-0.123			-0.081	0.444
PMPCB	0	-0.260	-0.100		-0.029	-1.280
GRPEL1	0	0.880	-0.630		0.363	-1.322
HSPA9	0	-0.110	-0.790	0.452	0.066	-0.024	0.697	0.588
SLC25A12	0	-0.350	0.780	-0.087			0.455	0.279
GFER	0	-0.460	0.150
MTX2	0	-0.150	0.000
MTX2	0	-0.150	0.000	-0.266			0.630	0.503
TOMM40	0	-0.040	-0.490
TIMM10	0	-0.090	-0.490
HSPD1	0	1.020	-0.650	1.151	0.719	-0.757
TIMM8B	0	0.900	-0.950	0.667
ATP5A1	0	-0.100	0.190	0.149	0.419	-0.743
CHCHD4	0	-1.200	1.920				-0.337	-0.327
CHCHD4	0	0.140	-0.330				-0.337	-0.327
PMPCA	0	-0.140	0.680		0.865	-0.098	0.972	0.919
MTX1	0						-0.307	0.032
TOMM20	0	-0.040	0.190
TOMM5	0	0.750	-0.950
TIMM22	0						-1.629
CYC1	0	0.160	-0.180				0.985	0.521
TOMM7	0	1.890	-0.240
DNAJC19	0	1.030	-1.100				-0.751
PAM16	0	0.200	0.280	0.621				0.200

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACO2	Ubiquitylation	K13		-1.183	_LQK(gl)ALGVR_
ATP5A1	Ubiquitylation	K161		-1.608	_VVDALGNAIDGK(gl)GPIGSK_
ATP5A1	Ubiquitylation	K175		-0.184	_VGLK(gl)APGIIPR_
ATP5A1	Ubiquitylation	K261		-0.997	_STVAQLVK(gl)R_
ATP5B	Ubiquitylation	K55		-1.344	_DYAAQTSPSPK(gl)AGAATGR_
ATP5B	Ubiquitylation	K426		-0.601	_GVQK(gl)ILQDYK_
ATP5B	Phosphorylation	S465		-1.223	_FLS(ph)QPFQVAEVFTGHMGK_
BCS1L	Ubiquitylation	K300	-1.879	-1.397	_DLAVENPVK(gl)YQGLGR_
CS	Ubiquitylation	K103	-0.259	0.372	_GFSIPECQK(gl)LLPK_
CS	Ubiquitylation	K107	-0.496		_GFSIPECQKLLPK(gl)_
CS	Ubiquitylation	K215	-0.426	-0.352	_LPCVAAK(gl)IYR_
CYC1	Ubiquitylation	K50		-1.489	_TPQAVALSSK(gl)SGLSR_
GFER	Phosphorylation	S59		-0.603	_DAAASASTPAQAPTSDS(ph)PVAEDASR_
HSPA9	Ubiquitylation	K368	-0.622	-0.734	_TIAPCQK(gl)AMQDAEVSK_
HSPD1	Phosphorylation	S70	0.210	0.487	_TVIIEQSWGS(ph)PK_
HSPD1	Ubiquitylation	K82	-0.300		_DGVTVAK(gl)SIDLK_
HSPD1	Ubiquitylation	K87	-0.005	0.292	_SIDLK(gl)DKYK_
HSPD1	Ubiquitylation	K130		-0.428	_EGFEK(gl)ISK_
HSPD1	Ubiquitylation	K233	0.853	0.024	_GYISPYFINTSK(gl)GQK_
HSPD1	Ubiquitylation	K292	0.339		_LK(gl)VGLQVVAVK_
MTX1	Ubiquitylation	K227	0.228	0.424	_EK(gl)YNADYDLSAR_
MTX2	Ubiquitylation	K177		-0.406	_AIGWGKK(gl)_
PAM16	Ubiquitylation	K472		-1.284	_SLQSLLGPSSK(gl)FR_
PAM16	Ubiquitylation	K508	-0.437	-0.945	_GLNLTTPGESDGFCANK(gl)LR_
PAM16	Ubiquitylation	K680	-2.000	-1.818	_SGPEPLQEGPGPK(gl)GGR_
PMPCA	Ubiquitylation	K232	-1.131	-0.941	_FCPTENVAK(gl)INR_
PMPCA	Ubiquitylation	K299		-0.658	_SVAQYTGGIAK(gl)LER_
PMPCA	Ubiquitylation	K478		-2.019	_NVKPEDVK(gl)R_
PMPCA	Ubiquitylation	K483		-1.110	_VASK(gl)MLR_
PMPCB	Ubiquitylation	K456		-1.174	_EVCTK(gl)YIYNR_
SLC25A13	Ubiquitylation	K5		0.019	_(ac)AAAK(gl)VALTK_
SLC25A4	Ubiquitylation	K52		0.200	_QYK(gl)GIIDCVVR_
SLC25A4	Ubiquitylation	K88	-2.095		_IPK(gl)EQGVLSFWR_
SLC25A4	Ubiquitylation	K172	-0.787	0.875	_LAADVGK(gl)SGTER_
SLC25A6	Ubiquitylation	K88	-2.095		_IPK(gl)EQGVLSFWR_
SLC25A6	Ubiquitylation	K172	-0.787	0.875	_LAADVGK(gl)SGTER_
TIMM10	Ubiquitylation	K45	-0.685		_EAELSK(gl)GESVCLDR_
TIMM10	Ubiquitylation	K81	-0.578	0.766	_LTELSMQDEELMK(gl)R_
TIMM13	Ubiquitylation	K49	-1.351		_K(gl)CIGKPGGSLDNSEQK_
TIMM50	Ubiquitylation	K167		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K168		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K353		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K354		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K434		0.302	_LAELSK(gl)SNK_
TIMM50	Ubiquitylation	K437	0.101	-0.071	_SNK(gl)QNLFLGSLTSR_
TIMM8B	Ubiquitylation	K95	0.786	1.423	_FAQIVQK(gl)GGQ_
TOMM20	Ubiquitylation	K35	-0.849	-0.051	_SDPNFK(gl)NR_
TOMM20	Ubiquitylation	K61	0.102	0.207	_LPDLK(gl)DAEAVQK_
TOMM22	Phosphorylation	S15	1.323	0.654	_AAAVAAAGAGEPQS(ph)PDELLPK_
TOMM40	Ubiquitylation	K175	0.584	-0.018	_SK(gl)MAIQTQQSK_
TOMM5	Ubiquitylation	K10	-1.494		_IEGLAPK(gl)LDPEEMKR_
TOMM5	Ubiquitylation	K17	-1.563	0.259	_LDPEEMK(gl)R_
TOMM7	Ubiquitylation	K6	0.651		_VKLSK(gl)EAK_
TOMM7	Ubiquitylation	K17	0.661	0.702	_LQQLFK(gl)GSQFAIR_
TOMM70A	Phosphorylation	S91	-0.960	-0.992	_AS(ph)PAPGSGHPEGPGAHLDMNSLDR_
TOMM70A	Phosphorylation	S96		-0.616	_ASPAPGS(ph)GHPEGPGAHLDMNSLDR_
TOMM70A	Ubiquitylation	K168	0.411	0.679	_AAAFEQLQK(gl)WK_
TOMM70A	Ubiquitylation	K170	0.387	0.193	_WK(gl)EVAQDCTK_
TOMM70A	Ubiquitylation	K233	0.092	0.712	_VLK(gl)LLGK_
TOMM70A	Ubiquitylation	K312	-0.244		_QYMEEENYDK(gl)IISECSK_
TOMM70A	Ubiquitylation	K359	-0.261		_VISLK(gl)EANVK_
TOMM70A	Ubiquitylation	K372		1.120	_ANALIK(gl)R_
TOMM70A	Ubiquitylation	K604	-0.781		_YGLK(gl)PPTL_
VDAC1	Ubiquitylation	K20	0.718	0.885	_DVFTK(gl)GYGFGLIK_
VDAC1	Ubiquitylation	K61		1.135	_VTGSLETK(gl)YR_
VDAC1	Phosphorylation	S102	0.928	0.928	_LTFDSS(ph)FSPNTGKK_
VDAC1	Phosphorylation	S104	0.569	0.615	_LTFDSSFS(ph)PNTGK_
VDAC1	Phosphorylation	T107		0.493	_LTFDSSFSPNT(ph)GKK_
VDAC1	Ubiquitylation	K109	0.352		_LTFDSSFSPNTGK(gl)K_
VDAC1	Ubiquitylation	K110	0.406	0.270	_LTFDSSFSPNTGKK(gl)_
VDAC1	Ubiquitylation	K274	0.839		_NVNAGGHK(gl)LGLGLEFQA_