bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TIMM8B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TIMM8B 0 2.876 0.900 -0.950 0.667

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TIMM8B Ubiquitylation K95 0.786 1.423 _FAQIVQK(gl)GGQ_

Background Information for TIMM8B:





Protein-protein Interactions for TIMM8B

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GPATCH8 Cat. description Hein, Mann, Cell 2015
Category members IP bait KLC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PDYN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YBEY Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TIMM8B

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Tim10/DDP_fam_Znf IPR004217 0


Protein complexes (CORUM database) featuring TIMM8B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TIMM8B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members Pathway Pathway_9 REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 0 0.33
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0005743 mitochondrial inner membrane Database 0.15
Category members GO Category GO:0006626 protein targeting to mitochondrion Database 0.11
Category members GO Category GO:0007605 sensory perception of sound Database 0
Category members GO Category GO:0042719 mitochondrial intermembrane space protein transporter complex Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


© Copyright Svejstrup Laboratory 2015