bioLOGIC-db

bioLOGIC Data

Query: NDUFB4

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
NDUFB4	0	-1.702	-0.070	-0.540	-0.250			-0.592	-0.035

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
NDUFB4	Ubiquitylation	K120		-0.825	_LIQEGK(gl)LDR_
NDUFB4	Ubiquitylation	K5		-1.281	_(ac)SFPK(gl)YKPSSLR_

ProteomicsDB-NDUFB4 »

Protein-protein Interactions for NDUFB4

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait BAG3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BMPR1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CDC16	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait ERCC6L	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FAM82A2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GOLT1B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait KCTD5	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PPP4R1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB5C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB7A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TMED2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait VAPA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait NDUFB11	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NDUFS6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in NDUFB4

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring NDUFB4

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring NDUFB4

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0016021	integral to membrane	Database	7.67
Category members	GO Category	GO:0005739	mitochondrion	Database	1.67
Category members	Pathway	Pathway_50	REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_	0	0.7
Category members	Pathway	Pathway_32	KEGG_HUNTINGTONS_DISEASE	0	0.46
Category members	GO Category	GO:0044281	small molecule metabolic process	Database	0.35
Category members	Pathway	Pathway_49	REACTOME_RESPIRATORY_ELECTRON_TRANSPORT	0	0.17
Category members	GO Category	GO:0022904	respiratory electron transport chain	Database	0.15
Category members	GO Category	GO:0005743	mitochondrial inner membrane	Database	0.15
Category members	GO Category	GO:0008137	NADH dehydrogenase (ubiquinone) activity	Database	0.11
Category members	GO Category	GO:0044237	cellular metabolic process	Database	0.08
Category members	GO Category	GO:0005747	mitochondrial respiratory chain complex I	Database	0.08
Category members	GO Category	GO:0006120	mitochondrial electron transport, NADH to ubiquinone	Database	0.07
Category members	Pathway	Pathway_13	REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT	0	0.04
Category members	Pathway	Pathway_29	KEGG_ALZHEIMERS_DISEASE	0	0
Category members	Pathway	Pathway_30	KEGG_OXIDATIVE_PHOSPHORYLATION	0	0
Category members	Pathway	Pathway_31	KEGG_PARKINSONS_DISEASE	0	0
Category members	GO Category	GO:0006979	response to oxidative stress	Database	0