bioLOGIC-db

bioLOGIC Data

Query: VDAC2

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
VDAC2	0	3.562	-0.270	0.880		1.276	-0.710

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
VDAC2	Phosphorylation	S115	0.635	0.506	_LTFDTTFS(ph)PNTGK_
VDAC2	Ubiquitylation	K121	0.266	0.090	_LTFDTTFSPNTGKK(gl)_
VDAC2	Ubiquitylation	K120		-0.029	_LTFDTTFSPNTGK(gl)K_
VDAC2	Ubiquitylation	K74		-0.220	_VTGTLETKYK(gl)_
VDAC2	Ubiquitylation	K31	0.529		_DIFNK(gl)GFGFGLVK_
VDAC2	Phosphorylation	T112	0.429		_LTFDT(ph)TFSPNTGKK_
VDAC2	Ubiquitylation	K285	0.885		_SINAGGHK(gl)VGLALELEA_

ProteomicsDB-VDAC2 »

Protein-protein Interactions for VDAC2

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait C1QBP	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FAM82A2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait FGFR1OP	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GOLT1B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MMGT1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MTX2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYO19	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PARD6B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB5C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB7A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TMED2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TMEM109	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TMEM63B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TRAPPC11	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TRIM33	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait VAPA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait DENR	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in VDAC2

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	Porin_Euk	IPR001925	0.72
Category members	Porin_Euk/Tom40	IPR027246	0.34

Protein complexes (CORUM database) featuring VDAC2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring VDAC2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0000166	nucleotide binding	Database	5.91
Category members	GO Category	GO:0005739	mitochondrion	Database	1.67
Category members	GO Category	GO:0046930	pore complex	Database	1.57
Category members	GO Category	GO:0042645	mitochondrial nucleoid	Database	0.61
Category members	Pathway	Pathway_32	KEGG_HUNTINGTONS_DISEASE	0	0.46
Category members	GO Category	GO:0005741	mitochondrial outer membrane	Database	0.46
Category members	GO Category	GO:0008308	voltage-gated anion channel activity	Database	0.31
Category members	GO Category	GO:0005743	mitochondrial inner membrane	Database	0.15
Category members	Pathway	Pathway_233	KEGG_CALCIUM_SIGNALING_PATHWAY	0	0.13
Category members	GO Category	GO:0055085	transmembrane transport	Database	0.12
Category members	GO Category	GO:0015288	porin activity	Database	0.09
Category members	Pathway	Pathway_31	KEGG_PARKINSONS_DISEASE	0	0
Category members	GO Category	GO:0006820	anion transport	Database	0