RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CUL3	2	2.600	-1.300	0.182	-0.454	0.077	-0.259	-0.135
NBN	2	-0.220	-0.170		0.708	0.569	-0.563	0.354
PPM1G	2	-0.190	-0.120	-0.705	0.316	0.971	1.049
CUL4A	2	-0.750	1.080	0.255	2.640	2.785	0.765	0.477
CUL1	1	0.630	-0.610	-0.314	0.662	2.069	0.342	0.118
MSH2	1	-0.130	0.010	0.224	0.457	0.838	0.840	0.366
TSC2	1	0.810	-0.710
TSC2	1	0.810	-0.710	-0.715
RHEB	1	2.630	-1.320	0.991				-0.417
CUL2	1	-1.790	3.760	-0.293	0.044	0.860	-0.146	0.162
CUL2	1	-1.790	3.760
KAT2B	1	-0.980	2.090
KHDRBS1	1	-0.370	-0.090
KHDRBS1	1	-0.370	-0.090	-0.648	-1.258	-0.381	-0.646	-0.079
MACF1	1						-0.173	-0.431
MACF1	1						-0.599
MACF1	1			0.244			0.182	0.206
MACF1	1						0.796	0.236
PML	1	-0.420	0.350		-0.244	0.322
DST	1	0.080	-0.480
DST	1	0.080	-0.480		0.991	1.748
DST	1	0.080	-0.480	0.105			-0.034	0.278
DST	1	0.080	-0.480				0.796	0.236
TBRG1	1	-1.260	2.590
APBB2	1	0.800	-0.750
ILK	1	-1.560	3.680				-0.463	-0.527
MAP2K1	1	-1.590	2.780
PA2G4	1	-0.010	0.070
PA2G4	1	-0.010	0.070		1.801	-3.688
PA2G4	1	-0.010	0.070	0.143			0.006	-0.075
SART1	1	-1.750	3.220	0.251	-0.597	0.017	-0.223	0.146
PKD1	0	-0.900	0.980
VASH1	0	1.580	-1.000
TSG101	0	0.060	-0.480
SESN1	0	0.400	-0.270
SGSM3	0	0.600	-0.480
CDKN3	0	0.480	-0.130
CGRRF1	0	-1.220	1.890
PPM1A	0	-0.680	1.340	0.402
PPM1A	0	-0.680	1.340		-1.556	-0.874
TGFB1	0	-0.550	1.050
CDK6	0	-0.190	0.160
CDK6	0	-0.190	0.160				-0.510	0.013
HBP1	0	-1.130	1.580
PRKAG2	0	1.300	-0.990	0.278			-0.667
TGFBR1	0	-0.260	0.020
AK1	0	-1.080	1.190
MAP2K6	0	1.270	-0.780
EIF4G2	0	0.700	0.050		-0.629	-0.963
EIF4G2	0	0.700	0.050	1.131			-0.729	0.052
ING4	0	-0.510	0.730
PRKAB1	0	0.640	-1.180
DHCR24	0	1.100	-0.830				0.024	-0.083
GADD45A	0	1.050	-0.170
STK11	0
CDKN1A	0	1.080	-0.750
SESN2	0	-0.060	-0.150
PRKAA1	0	0.910	0.060
RBM38	0	0.170	-0.240
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
CAB39	0	-0.920	0.670
TBRG4	0	-0.540	0.700	0.184	0.187	-0.619	0.057	0.574
MYC	0	0.170	0.550	-2.443	-0.949	-0.454		-1.290
KIF20B	0	0.720	-0.970				0.007	0.246
BARD1	0	0.470	0.260
GAS2L3	0	-0.870	0.740
RB1	0	1.180	-1.070		0.429	0.755
RB1	0	1.180	-1.070
ZFHX3	0	-0.200	0.390				-0.903	-0.394
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
RPTOR	0	0.520	-1.030				0.623	0.466
CDKN2A	0	-0.080	-0.260	-0.556		-1.080	-3.270	-1.110
TCF7L2	0	-0.550	0.790	-0.741
ATM	0						0.398	0.474
CDC123	0	-0.710	0.690
UHMK1	0	-1.130	2.350
JMY	0	1.260	-0.540	0.925
PRKAA2	0	-0.030	-0.350
PRKAA2	0	-0.030	-0.350
TSC1	0	1.100	-0.150
CUL5	0	0.290	-0.440	-0.390			0.300	-0.122
SMAD3	0	-1.560	1.800
SMAD3	0	0.270	-0.340
MTBP	0	-0.380	0.280
HRAS	0	1.470	-0.520
MLF1	0	0.220	-0.290
WDR6	0	0.590	-0.760	-0.847			-0.197	-0.347
CALR	0	-1.300	2.220				0.480	0.054
SOX2	0	-0.250	0.870
PRKAG1	0	0.400	-0.420	0.278			-0.667
GAS6	0	0.020	0.220		-1.517	-0.502
STRADA	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AK1	Ubiquitylation	K99	0.474		_DAMVAK(gl)VNTSK_
APBB2	Phosphorylation	S123	1.522	1.336	_NLS(ph)PTAVINITSEK_
ATM	Ubiquitylation	K307		-0.196	_GAYESTK(gl)WR_
ATM	Ubiquitylation	K331		-0.126	_GK(gl)YSSGFR_
ATM	Ubiquitylation	K385		-0.669	_ESSDYSVPCK(gl)R_
ATM	Ubiquitylation	K1101		-0.548	_LFQDTK(gl)GDSSR_
ATM	Ubiquitylation	K1109		-1.666	_LLK(gl)ALPLK_
ATM	Ubiquitylation	K1698		-1.026	_DASYTK(gl)ALK_
ATM	Ubiquitylation	K1738		-0.137	_SAAVTCLK(gl)NILATK_
ATM	Ubiquitylation	K2025		-1.497	_SIGEPDSLYGCGGGK(gl)MLQPITR_
BARD1	Phosphorylation	S186	0.193	0.942	_DASAQQDSYEFVSPS(ph)PPADVSER_
CAB39	Ubiquitylation	K20	0.992		_NLK(gl)ESMAVLEK_
CALR	Ubiquitylation	K48		0.703	_SDFGK(gl)FVLSSGK_
CALR	Ubiquitylation	K153	-0.924	0.619	_GK(gl)NVLINK_
CALR	Ubiquitylation	K159	-1.004	0.381	_NVLINK(gl)DIR_
CDC123	Ubiquitylation	K206	-0.224	0.298	_DYTQYYDHISKQK(gl)_
CDC123	Ubiquitylation	K218		0.669	_CIQDFFK(gl)K_
CDC123	Ubiquitylation	K219	1.041	0.669	_CIQDFFKK(gl)_
CDC123	Ubiquitylation	K327	-0.077	-0.348	_LIDFLK(gl)LKR_
CDC123	Ubiquitylation	K329		-0.049	_LIDFLKLK(gl)_
CDK6	Ubiquitylation	K3	0.121	0.039	_(ac)MEK(gl)DGLCR_
CDK6	Phosphorylation	S236		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S249		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S385		0.649	_HSSIS(ph)PVRLPLNSSLGAELSR_
CDK6	Phosphorylation	S420	0.004	-0.202	_ES(ph)KGSPVFLPR_
CDK6	Phosphorylation	S423	-0.155	-0.297	_GS(ph)PVFLPR_
CDK6	Phosphorylation	T514	0.364	0.570	_DSKPIALKEEIVT(ph)PK_
CDK6	Phosphorylation	S681	-2.532	-2.051	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	S685		-2.729	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	T692	-0.765	-1.849	_AIT(ph)PPQQPYK_
CDK6	Phosphorylation	S1082	-1.661	-0.980	_KETTSGTSTEPVKNS(ph)SPAPPQPAPGK_
CDK6	Phosphorylation	S1083	-1.093	-1.330	_NSS(ph)PAPPQPAPGK_
CDK6	Phosphorylation	T1244		-0.956	_RT(ph)PTMPQEEAAACPPHILPPEK_
CDKN1A	Ubiquitylation	K188	-2.505	-1.077	_QTSMTDFYHSK(gl)R_
CDKN3	Ubiquitylation	K86	-0.893	0.100	_GELSK(gl)YR_
CGRRF1	Ubiquitylation	K159	-2.330		_DTK(gl)IEDFGTVPR_
CUL1	Ubiquitylation	K262	0.119		_ESTEFLQQNPVTEYMK(gl)K_
CUL1	Ubiquitylation	K263	0.119	-0.055	_ESTEFLQQNPVTEYMK(gl)K_
CUL1	Ubiquitylation	K410	0.250	0.326	_FINNNAVTK(gl)MAQSSSK_
CUL1	Ubiquitylation	K417		0.761	_MAQSSSK(gl)SPELLAR_
CUL1	Ubiquitylation	K468	1.237		_FYAK(gl)MLAK_
CUL1	Ubiquitylation	K503		0.665	_QACGFEYTSK(gl)LQR_
CUL1	Ubiquitylation	K769	0.292		_VDGEK(gl)DTYSYLA_
CUL2	Ubiquitylation	K35	1.454		_VVDFDETWNK(gl)LLTTIK_
CUL2	Ubiquitylation	K257	0.023		_QEASNLLQESNCSQYMEK(gl)VLGR_
CUL2	Ubiquitylation	K401	0.064	-0.162	_ALTSVVNYREPK(gl)SVCK_
CUL2	Ubiquitylation	K423	-0.295		_SAK(gl)GMTENEVEDR_
CUL3	Ubiquitylation	K6		-0.611	_(ac)SNLSK(gl)GTGSR_
CUL3	Ubiquitylation	K236	1.952	0.663	_FLAENSASVYIKK(gl)_
CUL3	Ubiquitylation	K262	-0.525	-0.203	_STEEPIVK(gl)VVER_
CUL3	Ubiquitylation	K292	1.094	0.852	_NGK(gl)TEDLGCMYK_
CUL3	Ubiquitylation	K459		0.752	_LK(gl)TECGCQFTSK_
CUL3	Ubiquitylation	K680	-1.024		_IQTVAAK(gl)QGESDPERK_
CUL4A	Ubiquitylation	K8	0.690		_K(gl)GSFSALVGR_
CUL4A	Phosphorylation	S10	0.480	0.526	_KGS(ph)FSALVGR_
CUL4A	Ubiquitylation	K104	0.192		_VSPMLYK(gl)QLR_
CUL5	Ubiquitylation	K8	0.188		_(ac)ATSNLLK(gl)NK_
CUL5	Ubiquitylation	K397	-0.357		_GVGLK(gl)TQPESK_
CUL5	Ubiquitylation	K724	1.320	0.050	_TQEAIIQIMK(gl)MR_
CUL5	Ubiquitylation	K727		-0.081	_TQEAIIQIM(ox)K(gl)M(ox)RK_
DHCR24	Ubiquitylation	K76	-0.970	0.315	_VRDIQK(gl)QVR_
DHCR24	Ubiquitylation	K254		-0.170	_GLEAICAK(gl)FTHESQR_
DHCR24	Ubiquitylation	K313		0.393	_HVENYLK(gl)TNR_
DHCR24	Ubiquitylation	K367	-0.346	-0.263	_ISLLK(gl)LTQGETLR_
DHCR24	Ubiquitylation	K459	-0.920	-0.275	_QLEK(gl)FVR_
DHCR24	Ubiquitylation	K496	-0.539	-0.460	_EK(gl)LGCQDAFPEVYDK_
DHCR24	Ubiquitylation	K509		-0.754	_LGCQDAFPEVYDK(gl)ICK_
DST	Phosphorylation	S1382	0.207	1.088	_AMVDSQQKS(ph)PVK_
DST	Phosphorylation	S7512		0.381	_RGS(ph)DASDFDISEIQSVCSDVETVPQTHRPTPR_
EIF4G2	Ubiquitylation	K260	0.068	-1.066	_NVDVYDK(gl)R_
EIF4G2	Ubiquitylation	K361	0.871	0.407	_MCSLMLSK(gl)ELPAR_
EIF4G2	Phosphorylation	S454		-1.517	_MDRDPLGGLADMFGQMPGS(ph)GIGTGPGVIQDRFSPTMGR_
EIF4G2	Phosphorylation	T458	-0.619	-1.448	_DPLGGLADMFGQMPGSGIGT(ph)GPGVIQDRFSPTM(ox)GR_
EIF4G2	Phosphorylation	S468	-0.235	-0.781	_FS(ph)PTMGR_
EIF4G2	Phosphorylation	T581	-1.576	-0.919	_TQT(ph)PPLGQTPQLGLK_
GADD45A	Ubiquitylation	K12	-0.515	0.281	_TLEEFSAGEQK(gl)TER_
GADD45A	Ubiquitylation	K29		0.092	_VGDALEEVLSK(gl)ALSQR_
GAS2L3	Phosphorylation	S570		0.404	_SALNLNQPVSVSSVS(ph)PVK_
HBP1	Ubiquitylation	K426		-1.246	_NCGSPGSSQLSSNSLYAK(gl)AVK_
HRAS	Ubiquitylation	K170	-1.005		_K(gl)LNPPDESGPGCMSCK_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
ING4	Ubiquitylation	K114	0.730		_FEADLKEK(gl)_
JMY	Phosphorylation	S115	0.344		_SSAWAEGGS(ph)PR_
JMY	Phosphorylation	S713	-0.151	-0.126	_GAAS(ph)PVLQEDHCDSLPSVLQVEEK_
JMY	Phosphorylation	S971		-0.306	_IKEAS(ph)PESEDEEEALPCTDWEN_
JMY	Phosphorylation	S974		-0.581	_IKEASPES(ph)EDEEEALPCTDWEN_
KAT2B	Phosphorylation	S117		2.088	_NPNPS(ph)PTPPR_
KHDRBS1	Phosphorylation	S18	0.745	-0.921	_S(ph)GSM(ox)DPSGAHPSVR_
KHDRBS1	Phosphorylation	S20	0.944	-0.215	_SGS(ph)M(ox)DPSGAHPSVR_
KHDRBS1	Phosphorylation	S58	9.021		_AS(ph)PATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK_
KHDRBS1	Ubiquitylation	K165	-0.612	0.332	_VLIPVK(gl)QYPK_
KHDRBS1	Ubiquitylation	K169	-0.739	0.728	_QYPK(gl)FNFVGK_
KHDRBS1	Ubiquitylation	K185	0.103	0.578	_ILGPQGNTIK(gl)R_
KHDRBS1	Ubiquitylation	K194	0.511		_LQEETGAK(gl)ISVLGK_
KHDRBS1	Ubiquitylation	K432	-1.686		_APPARPVK(gl)GAYR_
KIF20B	Ubiquitylation	K104		0.166	_LSEK(gl)SSGQMAQK_
KIF20B	Phosphorylation	S1770	-0.902	-2.057	_FGDFLQHS(ph)PSILQSK_
MACF1	Ubiquitylation	K189	-0.349		_AVLLPLQGETAVEK(gl)GNIQR_
MACF1	Phosphorylation	S312	1.509	0.797	_LLDAEDVDVPS(ph)PDEK_
MACF1	Phosphorylation	S1399	-0.230	-0.113	_AFVESQQKS(ph)PGK_
MACF1	Phosphorylation	S3959	1.328	0.973	_RQGS(ph)FSEDVISHK_
MACF1	Phosphorylation	S3961		0.813	_RQGS(ph)FSEDVISHK_
MACF1	Phosphorylation	S4527	0.479		_SMDAM(ox)S(ph)SPTKTETVK_
MACF1	Phosphorylation	S4528	0.586	-0.026	_SMDAMSS(ph)PTKTETVK_
MACF1	Phosphorylation	S4553	0.011	-0.229	_AFLAELEQNS(ph)PK_
MACF1	Phosphorylation	T5728	0.246	0.783	_EVEEELAT(ph)SGGQSPTGEQIPQFQQR_
MACF1	Phosphorylation	S5733		1.034	_EVEEELATSGGQS(ph)PTGEQIPQFQQR_
MACF1	Phosphorylation	S7105	-1.286	-1.582	_S(ph)LSQPTPPPMPILSQSEAK_
MAP2K1	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K1	Phosphorylation	S385		0.066	_RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV_
MAP2K1	Phosphorylation	T386		0.377	_RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV_
MAP2K6	Phosphorylation	T28	-1.813	-0.792	_EAFEQPQTSST(ph)PPRDLDSK_
MAP2K6	Ubiquitylation	K232		0.220	_INPELNQK(gl)GYSVK_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
MLF1	Ubiquitylation	K88	-0.584	-0.309	_NYMQK(gl)LER_
MSH2	Ubiquitylation	K212		-0.233	_ECVLPGGETAGDMGK(gl)LR_
MSH2	Ubiquitylation	K249	0.461		_K(gl)GEQMNSAVLPEMENQVAVSSLSAVIK_
MSH2	Ubiquitylation	K347		2.867	_LVNQWIK(gl)QPLMDK_
MSH2	Ubiquitylation	K531	1.040		_VTCKEEK(gl)VLR_
MSH2	Ubiquitylation	K555		0.164	_FTNSK(gl)LTSLNEEYTK_
MSH2	Ubiquitylation	K635		-0.376	_IILK(gl)ASR_
MTBP	Phosphorylation	S639	-0.830		_TFVLTPELS(ph)PGK_
MYC	Phosphorylation	S20	-1.444	-1.145	_PLNVS(ph)FTNR_
MYC	Phosphorylation	T72	-1.699	-1.813	_FELLPT(ph)PPLS(ph)PSRR_
MYC	Phosphorylation	S76	-1.777	-1.435	_FELLPTPPLS(ph)PSR_
MYC	Phosphorylation	S81		0.459	_S(ph)GLCSPSYVAVTPFSLR_
MYC	Phosphorylation	S85	0.199	0.073	_SGLCS(ph)PSYVAVTPFSLR_
MYC	Ubiquitylation	K162	-2.475	-1.259	_LVSEK(gl)LASYQAAR_
MYC	Phosphorylation	S295		-0.903	_SESGS(ph)PSAGGHSKPPHSPLVLK_
MYC	Phosphorylation	S307		-1.486	_SES(ph)GSPSAGGHSKPPHS(ph)PLVLK_
MYC	Ubiquitylation	K340		-2.449	_VK(gl)LDSVR_
MYC	Ubiquitylation	K403		-3.432	_DQIPELENNEK(gl)APK_
NBN	Phosphorylation	T335		-1.121	_T(ph)TTPGPSLSQGVSVDEK_
NBN	Phosphorylation	S341	3.085		_TTTPGPS(ph)LSQGVSVDEK_
NBN	Phosphorylation	S343	3.710	3.629	_TTTPGPSLS(ph)QGVSVDEK_
NBN	Phosphorylation	S397	2.719	1.458	_MLS(ph)QDAPTVK_
NBN	Phosphorylation	S432	-0.192	-0.395	_IPNYQLS(ph)PTK_
NBN	Phosphorylation	T434	-0.188	-0.683	_IPNYQLSPT(ph)KLPSINK_
NBN	Phosphorylation	S615	1.985	4.691	_IS(ph)QENEIGKK_
PA2G4	Phosphorylation	S2	0.682	0.779	_S(ph)GEDEQQEQTIAEDLVVTK_
PA2G4	Phosphorylation	T11	0.587	0.951	_S(ph)GEDEQQEQT(ph)IAEDLVVTK_
PA2G4	Ubiquitylation	K51	1.374		_YK(gl)MGGDIANR_
PA2G4	Ubiquitylation	K277	0.023	-0.053	_TTIYK(gl)RDPSK_
PA2G4	Ubiquitylation	K282	-0.045	0.559	_DPSK(gl)QYGLK_
PA2G4	Ubiquitylation	K287		0.472	_QYGLK(gl)MK_
PA2G4	Phosphorylation	S360	0.161	0.753	_ALLQS(ph)SASR_
PKD1	Phosphorylation	T867		0.841	_GT(ph)YHVRLEVNNTVSGAAAQADVR_
PML	Ubiquitylation	K394	0.515	0.360	_LQDLSSCITQGK(gl)DAAVSKK_
PML	Phosphorylation	S403		3.141	_KAS(ph)PEAASTPRDPIDVDLPEEAER_
PML	Ubiquitylation	K476	-0.403	-0.735	_GPSYGEDVSNTTTAQK(gl)R_
PML	Phosphorylation	S504	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S505	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S518	-1.632	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S527	-1.392	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S530	0.466	0.093	_S(ph)PVIGSEVFLPNSNHVASGAGEAEER_
PML	Ubiquitylation	K623		-0.784	_IDNETQK(gl)ISQLAAVNR_
PPM1A	Ubiquitylation	K278		-0.176	_VCNEVVDTCLYK(gl)GSR_
PPM1G	Phosphorylation	S183	2.866	2.103	_SGGGTGEEPGS(ph)QGLNGEAGPEDSTR_
PPM1G	Ubiquitylation	K209	-1.051	-0.856	_ETPSQENGPTAK(gl)AYTGFSSNSER_
PPM1G	Ubiquitylation	K247	-2.531		_GTEAGQVGEPGIPTGEAGPSCSSASDK(gl)LPR_
PPM1G	Ubiquitylation	K339	-0.202	0.936	_GK(gl)QLIVANAGDSR_
PPM1G	Ubiquitylation	K383	0.075	0.659	_NAGGK(gl)VTMDGR_
PPM1G	Ubiquitylation	K519	-0.336	-0.692	_NTAELQPESGK(gl)R_
PRKAA1	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA1	Ubiquitylation	K396		-0.419	_HTLDELNPQK(gl)SK_
PRKAA1	Ubiquitylation	K485	-1.326	-1.554	_SIDDEITEAK(gl)SGTATPQR_
PRKAA2	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA2	Phosphorylation	S377	-0.020		_MPPLIADS(ph)PK_
PRKAB1	Phosphorylation	S108	-0.357	0.129	_S(ph)HNNFVAILDLPEGEHQYK_
PRKAG1	Ubiquitylation	K78		-0.588	_AAPLWDSK(gl)K_
PRKAG1	Ubiquitylation	K79		-0.588	_AAPLWDSK(gl)K_
PRKAG1	Ubiquitylation	K243	-0.525	-0.505	_VSALPVVDEK(gl)GR_
PRKAG2	Ubiquitylation	K78		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K79		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K243	-0.525	-0.505	_VSALPVVDEK(gl)GR_
RB1	Phosphorylation	S69	-3.602	-3.397	_TAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR_
RB1	Ubiquitylation	K97	-0.546		_LK(gl)IPDHVR_
RB1	Phosphorylation	T388	0.005	0.116	_TLQTDSIDSFETQRT(ph)PR_
RB1	Phosphorylation	T405	-0.851	-0.901	_KSNLDEEVNVIPPHT(ph)PVR_
RB1	Phosphorylation	S820		-0.019	_S(ph)PYKFPSSPLR_
RB1	Ubiquitylation	K823	-2.214		_SPYK(gl)FPSSPLR_
RB1	Phosphorylation	S827	0.824	0.111	_FPSS(ph)PLR_
RB1	Phosphorylation	S839	-0.701	-1.045	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K842		-0.751	_IPGGNIYISPLK(gl)SPYK_
RB1	Phosphorylation	S843	-0.701	-0.022	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K846	-2.084		_SPYK(gl)ISEGLPTPTK_
RB1	Phosphorylation	T853	0.039	-0.555	_ISEGLPT(ph)PTKM(ox)T(ph)PR_
RB1	Ubiquitylation	K856	-1.350		_ISEGLPTPTK(gl)MTPR_
RB1	Phosphorylation	T858	-0.782	0.564	_ISEGLPT(ph)PTKMT(ph)PR_
RB1	Ubiquitylation	K879	-0.187		_FQK(gl)INQMVCNSDR_
RBM38	Ubiquitylation	K114	-1.021		_KANVNLAYLGAK(gl)PR_
RHEB	Ubiquitylation	K121		-0.852	_VQIPIMLVGNKK(gl)_
RPTOR	Phosphorylation	S722	0.393	1.196	_SVSS(ph)YGNIR_
RPTOR	Phosphorylation	T857	-0.348		_VLDTSSLT(ph)QSAPAS(ph)PTNK_
RPTOR	Phosphorylation	S859	-0.462	-0.346	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S863	-0.208	-0.001	_VLDTSSLTQS(ph)APAS(ph)PTNK_
RPTOR	Phosphorylation	T865		-0.317	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S877	-0.114	-0.074	_GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK_
RPTOR	Ubiquitylation	K1008		-0.329	_QAQQVIQK(gl)GITR_
SART1	Phosphorylation	S448	1.013	-0.132	_RVS(ph)EVEEEKEPVPQPLPSDDTR_
SESN1	Ubiquitylation	K396		-0.281	_HFEDTSYGYK(gl)DFSR_
SESN2	Ubiquitylation	K13		-0.079	_AELK(gl)DYLR_
SGSM3	Ubiquitylation	K730		-1.056	_EAQQPLK(gl)EGVR_
SMAD3	Ubiquitylation	K13	-0.704		_(ac)SSILPFTPPIVK(gl)R_
SOX2	Phosphorylation	S251	0.157	-0.109	_SEASSS(ph)PPVVTSSSHSR_
STK11	Phosphorylation	S31	0.437	0.073	_IDS(ph)TEVIYQPR_
STK11	Phosphorylation	T32	1.256	0.248	_IDS(ph)TEVIYQPR_
STRADA	Ubiquitylation	K7		-0.518	_(ac)SFLVSK(gl)PER_
TBRG1	Phosphorylation	S10	0.221	-0.264	_(ac)SLLDGLASS(ph)PR_
TCF7L2	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFBR1	Ubiquitylation	K449	-0.991		_VVCEQK(gl)LRPNIPNR_
TGFBR1	Ubiquitylation	K502	0.553	0.430	_TLSQLSQQEGIK(gl)M_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
TSC1	Phosphorylation	S505	0.141	0.350	_GGFDS(ph)PFYR_
TSC2	Ubiquitylation	K3		-1.397	_(ac)AK(gl)PTSKDSGLK_
TSC2	Ubiquitylation	K14		-1.297	_DSGLKEK(gl)FK_
TSC2	Ubiquitylation	K69		0.051	_MIGQICEVAK(gl)TK_
TSC2	Ubiquitylation	K71		-0.157	_MIGQICEVAKTK(gl)_
TSC2	Ubiquitylation	K258		-0.278	_ELCEPCWK(gl)LMR_
TSC2	Ubiquitylation	K634		1.610	_LGLPNK(gl)DGVVR_
TSC2	Phosphorylation	S950	-0.152	-0.529	_STS(ph)LNERPK_
TSC2	Phosphorylation	S1064		-0.927	_SLLGLDSGELQSGPESSSS(ph)PGVHVR_
TSC2	Phosphorylation	S1248		-0.604	_SNTDSAVVMEEGS(ph)PGEVPVLVEPPGLEDVEAALGMDRR_
TSC2	Phosphorylation	S1329	-0.120		_S(ph)SSSPELQTLQDILGDPGDK_
TSC2	Phosphorylation	S1331	-0.262		_SSS(ph)SPELQTLQDILGDPGDKADVGR_
TSC2	Phosphorylation	S1332		-0.063	_SSSS(ph)PELQTLQDILGDPGDK_
TSC2	Phosphorylation	S1355	0.174	0.351	_ADVGRLS(ph)PEVK_
TSC2	Phosphorylation	S1362		0.859	_S(ph)QSGTLDGESAAWSASGEDSR_
TSC2	Phosphorylation	S1364	0.522	0.550	_SQS(ph)GTLDGESAAWSASGEDSR_
TSC2	Phosphorylation	T1366	0.137		_SQSGT(ph)LDGESAAWSASGEDSR_
TSC2	Phosphorylation	S1396		0.498	_S(ph)PSGLRPR_
TSC2	Phosphorylation	S1743	0.596		_RLISS(ph)VEDFTEFV_
TSG101	Ubiquitylation	K237	-1.467	0.252	_ASLISAVSDK(gl)LR_
TSG101	Ubiquitylation	K257	0.192	0.329	_AQAELNALK(gl)R_
UHMK1	Ubiquitylation	K383		0.050	_GQVFVEYANAGDSK(gl)AAQK_
VASH1	Phosphorylation	S313	-0.369	-0.324	_GTGPPS(ph)PTKDR_
WDR6	Ubiquitylation	K343		0.683	_GLGVSALCFK(gl)SR_
WDR6	Phosphorylation	S545		0.380	_AGAGAPVVGS(ph)GSSGGGNAFTGLGPVSTLPSLHGK_
WDR6	Ubiquitylation	K708	-0.627	-0.069	_EITCVK(gl)R_
WDR6	Ubiquitylation	K855	0.268	-0.051	_MVK(gl)VDPETR_
WDR6	Ubiquitylation	K910	-0.462		_ILQLLAETFHHK(gl)R_
ZFHX3	Phosphorylation	S425	-0.531	-0.563	_TPITSVPLGPLAS(ph)SPTK_