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Query: RBM38

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RBM38 0 -1.021 0.170 -0.240

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RBM38 Ubiquitylation K114 -1.021 _KANVNLAYLGAK(gl)PR_

Background Information for RBM38:


Pubmed-RBM38 »
Uniprot-RBM38 »
Biogrid-RBM38 »
ProteomicsDB-RBM38 »

Tumorportal-RBM38 »
COSMIC-RBM38 »
GenomeRNAi-RBM38 »
Genecards-RBM38


Protein-protein Interactions for RBM38
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CLASRP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTCD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBFOX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM24 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM184A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RBM38
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34


Protein complexes (CORUM database) featuring RBM38
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RBM38
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest Database 1.39
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0007049 cell cycle Database 0.69
Category members GO Category GO:0008285 negative regulation of cell proliferation Database 0.28
Category members GO Category GO:0003730 mRNA 3'-UTR binding Database 0.24
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members GO Category GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator Database 0
Category members GO Category GO:0007050 cell cycle arrest Database 0
Category members GO Category GO:0010830 regulation of myotube differentiation Database 0
Category members GO Category GO:0043484 regulation of RNA splicing Database 0
Category members GO Category GO:0070935 3'-UTR-mediated mRNA stabilization Database 0


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