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Query: SGSM3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SGSM3 0 -1.056 0.600 -0.480

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SGSM3 Ubiquitylation K730 -1.056 _EAQQPLK(gl)EGVR_

Background Information for SGSM3:


Pubmed-SGSM3 »
Uniprot-SGSM3 »
Biogrid-SGSM3 »
ProteomicsDB-SGSM3 »

Tumorportal-SGSM3 »
COSMIC-SGSM3 »
GenomeRNAi-SGSM3 »
Genecards-SGSM3


Protein-protein Interactions for SGSM3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KLF8 Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB5C Cat. description Hein, Mann, Cell 2015
Category members IP bait SNCA Cat. description Hein, Mann, Cell 2015
Category members IP bait HLA-B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SGSM3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SGSM3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SH3_2 IPR011511 0.08
Category members Rab-GTPase-TBC_dom IPR000195 0.05
Category members SH3_domain IPR001452 0
Category members Run IPR004012 0


Protein complexes (CORUM database) featuring SGSM3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SGSM3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005097 Rab GTPase activator activity Database 0.3
Category members GO Category GO:0032313 regulation of Rab GTPase activity Database 0.04
Category members GO Category GO:0005921 gap junction Database 0
Category members GO Category GO:0007050 cell cycle arrest Database 0
Category members GO Category GO:0017137 Rab GTPase binding Database 0
Category members GO Category GO:0032483 regulation of Rab protein signal transduction Database 0
Category members GO Category GO:0032486 Rap protein signal transduction Database 0
Category members GO Category GO:0045732 positive regulation of protein catabolic process Database 0


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