RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TBC1D5	2	-0.140	-0.050
RABGAP1	0	0.710	-0.120
RABGAP1	0	1.120	-0.230
TBC1D23	0	-0.840	1.610
TBC1D22A	0	1.390	-0.970
TBC1D1	0	-0.180	-0.330
TBC1D1	0	0.000	-0.510
TBC1D10A	0	-1.100	1.590
SGSM3	0	0.600	-0.480
TBC1D17	0	0.860	-0.300
TBC1D13	0	0.310	-0.620
TBC1D9	0	0.180	-0.560
TBC1D19	0	0.240	-0.550
TBC1D30	0	0.100	-0.170
TBC1D15	0	1.750	-0.640
TBC1D15	0	1.750	-0.640	-0.881			0.294	-0.189
TBC1D4	0	1.700	-0.820	-0.137			-2.080
TBCK	0	1.920	-1.100
TBC1D7	0	0.000	1.060
TBC1D32	0	1.980	-0.240
USP6NL	0	1.020	-0.820
RABGAP1L	0	-1.420	1.940				1.088	0.815
RABGAP1L	0	-1.420	1.940
TBC1D31	0	-1.210	0.680
TBC1D24	0
TBC1D2B	0	-0.110	0.690				0.688	0.032
TBC1D2B	0	-0.110	0.690
TBC1D16	0	-0.470	0.540
TBC1D10B	0	-0.430	0.410					-2.265
TBC1D9B	0	-0.630	0.720

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
RABGAP1	Ubiquitylation	K598		0.572	_ILITK(gl)ESPQDSAITR_
RABGAP1	Phosphorylation	T996	0.796	1.208	_EVLDEDT(ph)DEEKETLK_
RABGAP1L	Phosphorylation	S118	-0.865		_PS(ph)SPGGLPEEDSVLFNK_
RABGAP1L	Phosphorylation	S119	-0.647	-0.681	_PSS(ph)PGGLPEEDSVLFNK_
SGSM3	Ubiquitylation	K730		-1.056	_EAQQPLK(gl)EGVR_
TBC1D1	Phosphorylation	S237	0.074	0.459	_SFS(ph)QPGLR_
TBC1D1	Phosphorylation	S649		-0.335	_ANHLGDS(ph)GGTPVK_
TBC1D10A	Phosphorylation	S407	-1.359		_AILDAEPGPRPALQPS(ph)PSIR_
TBC1D10B	Phosphorylation	S22	-1.513	-1.692	_HGAPAAPS(ph)PPPR_
TBC1D10B	Phosphorylation	S132		-0.558	_ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR_
TBC1D10B	Phosphorylation	T148	-0.619	-1.612	_TEEARPSPAPGPGT(ph)PTGTPTR_
TBC1D10B	Phosphorylation	T150	-2.126	-1.244	_TEEARPSPAPGPGTPT(ph)GTPTR_
TBC1D10B	Phosphorylation	T152	-1.067	-1.764	_PSPAPGPGT(ph)PTGT(ph)PTR_
TBC1D10B	Ubiquitylation	K368	-0.237		_AK(gl)AWQYLSNSK_
TBC1D10B	Phosphorylation	S658	-0.967	-0.512	_RQQPPLGPSSS(ph)LLSLPGLK_
TBC1D10B	Phosphorylation	S661	-0.941		_QQPPLGPSSSLLS(ph)LPGLK_
TBC1D10B	Phosphorylation	S678	-1.354	-1.258	_AAGGAPS(ph)PPPPVRR_
TBC1D10B	Phosphorylation	S687	-2.149	-2.490	_RAS(ph)AGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK_
TBC1D13	Phosphorylation	S184	-0.629	-0.472	_SGVTNMSS(ph)PHK_
TBC1D15	Ubiquitylation	K68	-0.532	0.150	_K(gl)DSSSVVEWTQAPK(gl)ER_
TBC1D15	Phosphorylation	S78	0.938	0.734	_KDS(ph)SSVVEWTQAPK_
TBC1D15	Ubiquitylation	K81	-0.789	-0.376	_K(gl)DSSSVVEWTQAPK(gl)ER_
TBC1D15	Ubiquitylation	K190		-0.064	_YVVLCESPQDK(gl)R_
TBC1D15	Phosphorylation	S209	0.435	0.875	_S(ph)LSQSFENLLDEPAYGLIQK_
TBC1D15	Phosphorylation	S211	0.600	0.860	_SLS(ph)QSFENLLDEPAYGLIQK_
TBC1D15	Phosphorylation	S213	0.399	0.717	_SLSQS(ph)FENLLDEPAYGLIQK_
TBC1D15	Ubiquitylation	K239	-0.955	-0.233	_IK(gl)KDPYTATMIGFSK_
TBC1D15	Ubiquitylation	K240	-0.650	0.768	_IK(gl)KDPYTATMIGFSK_
TBC1D15	Ubiquitylation	K369	0.406		_FLLGYFPWDSTK(gl)EER_
TBC1D15	Ubiquitylation	K413		0.215	_SLIEK(gl)DVNR_
TBC1D15	Ubiquitylation	K616		-0.016	_AEAISLQMVK(gl)CK_
TBC1D15	Ubiquitylation	K618		0.350	_AEAISLQMVKCK(gl)_
TBC1D15	Phosphorylation	S666	-0.341	-0.052	_NDS(ph)PTQIPVSSDVCR_
TBC1D15	Phosphorylation	T668		-0.497	_NDSPT(ph)QIPVSSDVCRLT(ph)PA_
TBC1D15	Phosphorylation	T680		-0.662	_NDS(ph)PTQIPVSSDVCRLT(ph)PA_
TBC1D16	Phosphorylation	T99	-5.039	-1.056	_YIT(ph)PESS(ph)PVR_
TBC1D16	Phosphorylation	S103	-5.039	-1.056	_YIT(ph)PESS(ph)PVR_
TBC1D17	Ubiquitylation	K22	0.036	1.050	_GGVYLHTSAK(gl)K_
TBC1D17	Ubiquitylation	K23	0.018		_GGVYLHTSAKK(gl)_
TBC1D17	Ubiquitylation	K303	1.080	0.218	_LQQVPELK(gl)NR_
TBC1D19	Ubiquitylation	K20		-0.316	_LK(gl)GSNLYSQLER_
TBC1D22A	Phosphorylation	S165	0.233		_S(ph)QSLPHSATVTLGGTSDPSTLSSSALSER_
TBC1D22A	Phosphorylation	S167	0.330	0.432	_SQS(ph)LPHSATVTLGGTSDPSTLSSSALSER_
TBC1D23	Ubiquitylation	K497		0.452	_MTVALKTK(gl)_
TBC1D23	Ubiquitylation	K684	-0.336		_YLIPNAGDATK(gl)AIK_
TBC1D24	Ubiquitylation	K266		-0.507	_AGQPLESDSVK(gl)QDIR_
TBC1D24	Phosphorylation	S480	-1.967	-2.316	_HPELTKPPPLM(ox)AAEPTAPLSHSASSDPADRLS(ph)PFLAAR_
TBC1D2B	Ubiquitylation	K902		-0.606	_TILDARK(gl)_
TBC1D2B	Phosphorylation	S957	0.094	0.088	_DTSPDKGELVS(ph)DEEEDT_
TBC1D30	Phosphorylation	S30		0.192	_LES(ph)QEEETIPAAPPAPR_
TBC1D30	Phosphorylation	S114	0.531	0.396	_RRDS(ph)LDSSTEASGSDVVLGGR_
TBC1D30	Phosphorylation	T795		-0.143	_T(ph)IEGQSPEPVFGDADVDVSAVQAK_
TBC1D31	Ubiquitylation	K877	0.997	0.100	_LIEAGETQSQK(gl)TQK_
TBC1D32	Ubiquitylation	K814		-0.815	_NQDLPNK(gl)TEYSLR_
TBC1D4	Phosphorylation	S262	-2.075		_GPDPGEDLADLEVVVPGS(ph)PGDCLPEEADGTDTHLGLPAGASQPALTSSR_
TBC1D4	Phosphorylation	S341	-0.345	-0.244	_HAS(ph)APSHVQPSDSEK_
TBC1D4	Phosphorylation	S569	0.531	0.754	_SLTS(ph)SLENIFSR_
TBC1D4	Phosphorylation	S570	0.511	0.509	_SLTSS(ph)LENIFSR_
TBC1D4	Phosphorylation	S588	0.602	0.593	_LGS(ph)VDSFER_
TBC1D4	Phosphorylation	S591	0.887	1.498	_LGSVDS(ph)FER_
TBC1D4	Phosphorylation	S666	0.266	0.439	_AQGVRS(ph)PLLR_
TBC1D4	Phosphorylation	S751		0.968	_TSS(ph)T(ph)CSNESLSVGGTSVTPR_
TBC1D4	Phosphorylation	T752		0.968	_TSS(ph)T(ph)CSNESLSVGGTSVTPR_
TBC1D4	Phosphorylation	S754	0.832	0.968	_TS(ph)STCS(ph)NESLSVGGTSVTPR_
TBC1D4	Phosphorylation	S787	0.077		_VASPMNKS(ph)PSAMQQQDGLDR_
TBC1D5	Phosphorylation	S43	-0.254	0.730	_RTS(ph)STLDSEGTFNSYR_
TBC1D5	Phosphorylation	S44	1.016	0.433	_TSS(ph)TLDSEGTFNSYR_
TBC1D5	Ubiquitylation	K168		0.859	_SMIEQDVK(gl)R_
TBC1D5	Ubiquitylation	K448	0.316		_TNAK(gl)GAPLNINK_
TBC1D5	Phosphorylation	S522	-1.352	-0.569	_SES(ph)MPVQLNK_
TBC1D5	Phosphorylation	S561		3.787	_NISSS(ph)PSVESLPGGR_
TBC1D5	Phosphorylation	S563	1.822	0.753	_NISSSPS(ph)VESLPGGR_
TBC1D5	Phosphorylation	S566		0.618	_NISSSPSVES(ph)LPGGR_
TBC1D5	Phosphorylation	T574		0.358	_EFT(ph)GSPPSSATK_
TBC1D5	Phosphorylation	S576	0.284	0.163	_EFTGS(ph)PPSSATK_
TBC1D7	Ubiquitylation	K118		-0.101	_MYQLESGK(gl)LPR_
TBC1D7	Ubiquitylation	K165		0.026	_FVNQLNTK(gl)YR_
TBC1D9	Ubiquitylation	K552	0.379		_SMGK(gl)YNLATEEIER_
TBC1D9B	Phosphorylation	S427		-1.276	_ASVVDPSTESSPAPQEGS(ph)EQPASPASPLSSR_
TBC1D9B	Phosphorylation	S432	-1.998		_ASVVDPSTESSPAPQEGSEQPAS(ph)PASPLSSR_
TBC1D9B	Phosphorylation	S435	-1.785	-1.823	_ASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR_
TBCK	Ubiquitylation	K756		-1.151	_ESIPLNDLK(gl)SEVSPR_
TBCK	Phosphorylation	S890	-0.025	0.175	_IKPTGLLTIPS(ph)PQI_
USP6NL	Ubiquitylation	K10	0.472	-0.742	_(ac)MNSDQDVALK(gl)LAQER_
USP6NL	Phosphorylation	S396	-0.213	-0.319	_SVGRPS(ph)PLASGR_
USP6NL	Phosphorylation	S714	-0.115	0.036	_IEVLPVDTGAGGYSGNS(ph)GSPK_
USP6NL	Phosphorylation	S716	0.006	-0.090	_IEVLPVDTGAGGYSGNSGS(ph)PK_