bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TBC1D1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TBC1D1 0 0.533 -0.180 -0.330
TBC1D1 0 0.533 0.000 -0.510

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TBC1D1 Phosphorylation S237 0.074 0.459 _SFS(ph)QPGLR_
TBC1D1 Phosphorylation S649 -0.335 _ANHLGDS(ph)GGTPVK_

Background Information for TBC1D1:





Protein-protein Interactions for TBC1D1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ZFC3H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TBC1D1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rab-GTPase-TBC_dom IPR000195 0.05
Category members PTB/PI_dom IPR006020 0
Category members DUF3350 IPR021785 0


Protein complexes (CORUM database) featuring TBC1D1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TBC1D1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005097 Rab GTPase activator activity Database 0.3
Category members GO Category GO:0032313 regulation of Rab GTPase activity Database 0.04
Category members GO Category GO:0032880 regulation of protein localization Database 0


© Copyright Svejstrup Laboratory 2015