RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
DDX4	2	0.190	0.190	0.081	-0.794	-0.166	-0.062	-0.025
RSL1D1	1	0.030	0.070
SYCP1	1	-1.970	2.940		-0.881
GNB2L1	1	1.000	-0.100		0.279	1.704
GNB2L1	1	1.000	-0.100	-0.278	-0.107	-0.424
MYCBP2	0	0.060	-0.220				-0.056	0.347
CDH1	0	0.150	0.280	-0.623
NCKAP1	0	1.120	-0.620	0.347	0.023	-0.306	1.181	0.448
TBC1D1	0	-0.180	-0.330
TBC1D1	0	0.000	-0.510
PICALM	0	0.890	-0.980				0.221	0.666
PICALM	0	0.890	-0.980
SIX4	0	-0.720	1.600
WASL	0	-0.430	0.380
AAK1	0	1.900	-1.150
AAK1	0	1.900	-1.150				0.289	-0.421
SUMO1	0	0.450	0.060	-0.088	0.599	0.276	0.608	0.499
RAB14	0	0.630	-0.150				0.314	0.321
SIX1	0	1.730	-1.230		-0.334	0.495
CAMK1	0	1.160	-0.740
ARHGDIA	0	-0.150	-0.030	0.141				-2.525
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
CELSR2	0	-0.430	0.910
RABGAP1L	0	-1.420	1.940				1.088	0.815
RABGAP1L	0	-1.420	1.940
TTC8	0	0.800	-1.070
RAB8A	0	-0.300	0.550				0.568	0.278
RAB8A	0	-0.300	0.550		1.641	-1.484	0.560	0.491
SEPT2	0	-0.720	1.100				0.500	-0.778
RALGAPB	0	-0.040	0.200
BCL2	0	0.910	-0.740
PTCH1	0	0.630	-0.690

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AAK1	Phosphorylation	T605		-0.689	_VQT(ph)TPPPAVQGQK_
AAK1	Phosphorylation	T606	-0.648	-1.206	_VQTT(ph)PPPAVQGQK_
AAK1	Phosphorylation	T620	-0.540	-0.524	_VGSLT(ph)PPSS(ph)PK_
AAK1	Phosphorylation	S623	-0.540	-0.550	_VGSLT(ph)PPS(ph)SPK_
AAK1	Phosphorylation	S624	-0.737	-0.516	_VGSLT(ph)PPSS(ph)PK_
AAK1	Phosphorylation	S652	0.769	1.397	_S(ph)TQLLQAAAAEASLNK_
AAK1	Phosphorylation	T653	0.769	1.397	_S(ph)TQLLQAAAAEASLNK_
AAK1	Phosphorylation	S947	-0.044	0.120	_S(ph)ESNEDLFGLVPFDEITGSQQQK_
AAK1	Phosphorylation	S949	0.168	-0.189	_SES(ph)NEDLFGLVPFDEITGSQQQK_
AAK1	Phosphorylation	T1014	-0.576	0.108	_TLKPTYRT(ph)PER_
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
ARHGDIA	Phosphorylation	S24	-1.058	-0.942	_(ac)AEQEPTAEQLAQIAAENEEDEHS(ph)VNYKPPAQK_
ARHGDIA	Ubiquitylation	K52		0.380	_YK(gl)EALLGR_
ARHGDIA	Ubiquitylation	K99	0.365		_K(gl)QSFVLK_
ARHGDIA	Ubiquitylation	K127	1.141		_EIVSGMK(gl)YIQHTYR_
ARHGDIA	Ubiquitylation	K141	0.314	0.567	_IDK(gl)TDYM(ox)VGSYGPR_
ARHGDIA	Ubiquitylation	K167	-1.199		_AEEYEFLTPVEEAPK(gl)GMLAR_
ARHGDIA	Ubiquitylation	K178		0.739	_GSYSIK(gl)SR_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
CAMK1	Ubiquitylation	K49		-0.158	_LVAIK(gl)CIAK_
CELSR2	Ubiquitylation	K2674	0.085	-0.768	_SGK(gl)SQPSYIPFLLR_
DDX4	Ubiquitylation	K78	1.311		_DK(gl)DAYSSFGSR_
DDX4	Ubiquitylation	K93	0.657	1.846	_GK(gl)SSFFSDR_
DDX4	Phosphorylation	S94	0.172		_S(ph)SFFSDRGSGSR_
DDX4	Phosphorylation	S102	0.008	0.230	_SSFFSDRGS(ph)GSR_
DDX4	Phosphorylation	S104	-0.231	0.320	_SSFFSDRGSGS(ph)R_
DDX4	Ubiquitylation	K130	1.572	1.502	_SGFGK(gl)FER_
DDX4	Ubiquitylation	K347	-0.406	0.360	_GK(gl)IGLDFCK_
DDX4	Ubiquitylation	K503	-0.796		_SGK(gl)SPILVATAVAAR_
DDX4	Phosphorylation	S602		-0.349	_S(ph)SRFSGGFGAR_
DDX4	Phosphorylation	S603		-0.330	_SS(ph)RFSGGFGAR_
DDX4	Phosphorylation	S606	-0.248	-0.447	_FS(ph)GGFGAR_
GNB2L1	Ubiquitylation	K38	-0.238	0.350	_DK(gl)TIIMWK_
GNB2L1	Ubiquitylation	K106	-0.290		_RFVGHTK(gl)DVLSVAFSSDNR_
GNB2L1	Ubiquitylation	K130		0.632	_TIK(gl)LWNTLGVCK_
GNB2L1	Ubiquitylation	K175	-0.554	-0.015	_LVK(gl)VWNLANCK_
GNB2L1	Ubiquitylation	K183	-0.161	-0.282	_VWNLANCK(gl)_
GNB2L1	Ubiquitylation	K185	-0.061	-0.249	_VWNLANCKLK(gl)_
GNB2L1	Ubiquitylation	K257		-0.288	_YWLCAATGPSIK(gl)_
GNB2L1	Ubiquitylation	K271	0.756	-0.007	_IIVDELK(gl)QEVISTSSK_
MYCBP2	Phosphorylation	S2749	0.017	-0.052	_S(ph)LSPNHNTLQTLK_
MYCBP2	Phosphorylation	S2751	0.170	0.255	_SLS(ph)PNHNTLQTLK_
MYCBP2	Phosphorylation	S2831		0.378	_S(ph)KSDSYTLDPDTLR_
MYCBP2	Phosphorylation	S2833	-0.275	-1.121	_SKS(ph)DSYTLDPDTLR_
MYCBP2	Phosphorylation	S3467	-0.138	0.527	_VNS(ph)GDTEVGSSLLR_
MYCBP2	Ubiquitylation	K3750	1.316	0.824	_NITINCVK(gl)GINAR_
NCKAP1	Ubiquitylation	K12	-1.114	-0.228	_SVLQPSQQK(gl)LAEK_
NCKAP1	Ubiquitylation	K16	0.326		_LAEK(gl)LTILNDR_
NCKAP1	Ubiquitylation	K190		-0.009	_LGQMIVDYENPLK(gl)K_
NCKAP1	Ubiquitylation	K191		-0.009	_LGQMIVDYENPLK(gl)K_
NCKAP1	Ubiquitylation	K1075		-0.817	_IGQETDK(gl)TTTR_
PICALM	Ubiquitylation	K210	-0.364	0.811	_YLNEK(gl)AVSYR_
PICALM	Phosphorylation	T294		-0.800	_KPHTSLT(ph)TAASPVSTSAGGIM(ox)TAPAIDIFSTPSSSNSTSK_
PTCH1	Ubiquitylation	K904		-0.390	_DKPIDISQLTK(gl)QR_
RAB14	Ubiquitylation	K170	-1.161		_TGENVEDAFLEAAK(gl)K_
RAB14	Ubiquitylation	K171	-1.161	-0.915	_TGENVEDAFLEAAKK(gl)_
RAB14	Ubiquitylation	K193		-0.640	_IYQNIQDGSLDLNAAESGVQHK(gl)PSAPQGGR_
RAB8A	Ubiquitylation	K3	0.848		_(ac)AK(gl)TYDYLFK_
RAB8A	Ubiquitylation	K138	1.091		_ERGEK(gl)LALDYGIK_
RAB8A	Ubiquitylation	K163		0.199	_LLLGNK(gl)CDMEAK_
RAB8A	Ubiquitylation	K174	-0.188		_VQK(gl)EQADKLAR_
RAB8A	Phosphorylation	S185	0.117	0.264	_KLEGNSPQGS(ph)NQGVK_
RAB8A	Ubiquitylation	K190	-0.573		_LEGNSPQGSNQGVK(gl)ITPDQQK_
RAB8A	Ubiquitylation	K213	-0.059	0.420	_DILLK(gl)SGGR_
RABGAP1L	Phosphorylation	S118	-0.865		_PS(ph)SPGGLPEEDSVLFNK_
RABGAP1L	Phosphorylation	S119	-0.647	-0.681	_PSS(ph)PGGLPEEDSVLFNK_
RALGAPB	Phosphorylation	T379	-0.619	-0.304	_LSM(ox)PQSAAVSTT(ph)PPHNRR_
RALGAPB	Phosphorylation	S414		-0.739	_VQHQTS(ph)STSPLSSPNQTSSEPRPLPAPR_
RALGAPB	Phosphorylation	T733	0.902		_TNSGISSASGGSTEPT(ph)TPDSERPAQALLR_
RALGAPB	Phosphorylation	T734	1.329		_TNSGISSASGGSTEPTT(ph)PDSERPAQALLR_
RSL1D1	Ubiquitylation	K254		2.420	_LLFVK(gl)TEK_
RSL1D1	Phosphorylation	T358	0.383	0.525	_AT(ph)NESEDEIPQLVPIGK_
RSL1D1	Phosphorylation	S361	0.395	0.489	_ATNES(ph)EDEIPQLVPIGK_
RSL1D1	Phosphorylation	S427	-1.118		_AAESETPGKS(ph)PEK_
SEPT2	Ubiquitylation	K74	-2.504	-0.241	_VIPGAAEK(gl)IER_
SEPT2	Ubiquitylation	K190	-0.563	-0.040	_ADTLTLK(gl)ER_
SEPT2	Phosphorylation	S218	0.274	0.283	_IYHLPDAES(ph)DEDEDFKEQTR_
SEPT2	Ubiquitylation	K249	-0.586	0.854	_ASIPFSVVGSNQLIEAK(gl)GK_
SEPT2	Ubiquitylation	K251		0.572	_ASIPFSVVGSNQLIEAKGK(gl)_
SEPT2	Ubiquitylation	K310	-1.570		_K(gl)VENEDMNK(gl)DQILLEK_
SEPT2	Ubiquitylation	K318	-1.909		_K(gl)VENEDMNK(gl)DQILLEK_
SIX1	Ubiquitylation	K53	0.475		_AK(gl)AVVAFHR_
SIX4	Phosphorylation	S44	-0.717	-1.599	_EVAGGAAVGLS(ph)PPAPAPFPLEPGDAATAAAR_
SUMO1	Phosphorylation	S2	0.441	0.416	_(ac)S(ph)DQEAKPSTEDLGDKK_
SUMO1	Ubiquitylation	K7	-0.850	-1.885	_(ac)SDQEAK(gl)PSTEDLGDKK_
SUMO1	Ubiquitylation	K16	-0.686	-1.532	_(ac)SDQEAKPSTEDLGDK(gl)KEGEYIK_
SUMO1	Ubiquitylation	K17	-0.857	-1.847	_(ac)SDQEAKPSTEDLGDKK(gl)EGEYIK_
SUMO1	Ubiquitylation	K23	0.713	-0.346	_EGEYIK(gl)LK_
SUMO1	Ubiquitylation	K37	0.417		_VIGQDSSEIHFK(gl)VK_
SUMO1	Ubiquitylation	K45	0.975		_MTTHLK(gl)K_
SUMO1	Ubiquitylation	K46	0.647		_K(gl)LKESYCQR_
SUMO1	Ubiquitylation	K48	-0.241	-0.185	_LK(gl)ESYCQR_
TBC1D1	Phosphorylation	S237	0.074	0.459	_SFS(ph)QPGLR_
TBC1D1	Phosphorylation	S649		-0.335	_ANHLGDS(ph)GGTPVK_
TTC8	Ubiquitylation	K184		-0.765	_LNLTK(gl)YSQKPK_
TTC8	Ubiquitylation	K259		0.324	_VQIGK(gl)CYYR_
WASL	Phosphorylation	S430	0.399	0.664	_VEQNSRPVS(ph)CSGR_
WASL	Phosphorylation	S432		1.141	_VEQNSRPVSCS(ph)GR_