bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SYCP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SYCP1 1 2.059 -1.970 2.940 -0.881

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for SYCP1:


Pubmed-SYCP1 »
Uniprot-SYCP1 »
Biogrid-SYCP1 »
ProteomicsDB-SYCP1 »

Tumorportal-SYCP1 »
COSMIC-SYCP1 »
GenomeRNAi-SYCP1 »
Genecards-SYCP1


Protein-protein Interactions for SYCP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait SYCP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SYCP1
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SYCP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SYCP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members Pathway Pathway_320 REACTOME_CELL_CYCLE 0 11.08
Category members Pathway Pathway_884 REACTOME_MEIOTIC_SYNAPSIS 0 7.46
Category members Pathway Pathway_319 REACTOME_CHROMOSOME_MAINTENANCE 0 7.37
Category members Pathway Pathway_875 REACTOME_MEIOSIS 0 6.39
Category members GO Category GO:0005694 chromosome Database 3.87
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0051301 cell division Database 1.15
Category members GO Category GO:0001673 male germ cell nucleus Database 0.44
Category members GO Category GO:0000795 synaptonemal complex Database 0
Category members GO Category GO:0000801 central element Database 0
Category members GO Category GO:0000802 transverse filament Database 0
Category members GO Category GO:0007130 synaptonemal complex assembly Database 0
Category members GO Category GO:0007131 reciprocal meiotic recombination Database 0
Category members GO Category GO:0007283 spermatogenesis Database 0
Category members GO Category GO:0032880 regulation of protein localization Database 0


.

© Copyright Svejstrup Laboratory 2015