bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TBC1D23

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TBC1D23 0 1.726 -0.840 1.610

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TBC1D23 Ubiquitylation K497 0.452 _MTVALKTK(gl)_
TBC1D23 Ubiquitylation K684 -0.336 _YLIPNAGDATK(gl)AIK_

Background Information for TBC1D23:





Protein-protein Interactions for TBC1D23

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FLYWCH2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HS2ST1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KBTBD7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NPDC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLAMF7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TBC1D23 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TBC1D23

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Rab-GTPase-TBC_dom IPR000195 0.05
Category members Rhodanese-like_dom IPR001763 0


Protein complexes (CORUM database) featuring TBC1D23

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TBC1D23

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005097 Rab GTPase activator activity Database 0.3
Category members GO Category GO:0032755 positive regulation of interleukin-6 production Database 0.04
Category members GO Category GO:0032313 regulation of Rab GTPase activity Database 0.04
Category members GO Category GO:0032680 regulation of tumor necrosis factor production Database 0
Category members GO Category GO:0050727 regulation of inflammatory response Database 0


© Copyright Svejstrup Laboratory 2015