RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TIMELESS	2	-0.820	1.340	-0.115	-0.810	1.489	0.880	0.424
FOXO3	2	-0.410	-0.120
TRIP12	2	-1.630	2.710				-0.585	-0.217
TRIP12	2	-1.630	2.710				0.578	0.523
FOXC1	1	-2.160	3.640	-1.217	-0.424	0.659
GTF2IRD2	1	0.070	-0.050	-0.275	-0.199	0.020	0.150	0.028
GTF2IRD2B	1			-0.275	-0.199	0.020	0.150	0.028
CAD	1	1.760	-0.990	-0.363			-0.027	0.051
POLR1B	1	-1.220	2.660	0.614	0.697	0.425	1.045	0.207
TDG	1	1.400	-0.150
FOXK2	1	0.260	-0.410
FOXK2	1	0.260	-0.410	0.009	0.098	0.300
PSEN2	1	-1.820	3.280
RICTOR	1	-0.330	0.710
RICTOR	1	-0.270	0.570
HTT	1	-0.200	-0.360	0.632			0.847	0.550
PDGFA	1	0.190	-0.340		-2.109	1.885
FOXJ3	1	-1.390	2.020
ZFX	0	-0.670	0.680	-0.103			1.047	0.485
PGM3	0	-0.810	1.250
PGM3	0	-0.810	1.250	0.589
PSEN1	0	0.930	-1.110
APLP2	0	-0.080	0.400
BIRC5	0						-0.309	-0.536
POFUT1	0	-0.040	0.310
DNAJA3	0	-0.010	-0.240	0.786	0.226	-0.161	-0.800	-0.347
TGFB1	0	-0.550	1.050
LSR	0						0.373	-0.563
TGFBR1	0	-0.260	0.020
CCDC47	0	0.850	-0.930	0.233			0.184	0.318
AMBRA1	0	1.670	-0.450	-1.226				-2.109
HMGCR	0	0.240	0.010
WNT5A	0
FOXP1	0	-1.070	2.200
RAB14	0	0.630	-0.150				0.314	0.321
TGFB3	0	0.900	-0.540
USP22	0	-1.620	2.280	-0.102			-0.073	-0.208
TWSG1	0	0.420	-0.740
FOXA1	0	1.190	-0.010
LAMA5	0	-1.280	1.860	1.257			0.402	0.337
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
AKIRIN2	0	-0.130	0.530
ACVR1B	0	-0.720	1.030
TPM1	0	0.280	-0.190
UBR3	0	0.310	-0.860
CELF2	0	-0.750	0.440			-1.052	-0.790	0.146
ATP5A1	0	-0.100	0.190	0.149	0.419	-0.743
CCNO	0	-0.720	0.660
SMARCA5	0	0.420	-0.750	0.381	0.398	0.759	0.628	0.494
RACGAP1	0	0.180	0.230				-0.308	-0.006
RACGAP1	0	1.070	-0.710				-0.308	-0.006
CDK5	0	-1.100	1.740	-0.236			1.063	0.312
FOXK1	0	-0.290	-0.420
FOXK1	0	-0.290	-0.420			0.639
TSC1	0	1.100	-0.150
FOXC2	0	0.270	-0.510	-1.217	-0.424	0.659
EHMT1	0	0.540	-0.340	-0.405			0.294	0.151
FOXD2	0	-1.070	0.890
EPOR	0	0.450	-0.350

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACVR1B	Ubiquitylation	K215		0.000	_TIVLQEIIGK(gl)GR_
AKIRIN2	Phosphorylation	S21	-1.238	-1.325	_RTLDFDPLLSPAS(ph)PK_
AMBRA1	Ubiquitylation	K175	-0.373	0.447	_REPFAVVK(gl)TASEMER_
APLP2	Ubiquitylation	K744	-1.204		_HLNK(gl)M(ox)QNHGYENPTYK_
ATP5A1	Ubiquitylation	K161		-1.608	_VVDALGNAIDGK(gl)GPIGSK_
ATP5A1	Ubiquitylation	K175		-0.184	_VGLK(gl)APGIIPR_
ATP5A1	Ubiquitylation	K261		-0.997	_STVAQLVK(gl)R_
BIRC5	Ubiquitylation	K15		-1.446	_(ac)GAPTLPPAWQPFLK(gl)DHR_
BIRC5	Ubiquitylation	K113	0.088	-0.061	_HSSGCAFLSVK(gl)K_
BIRC5	Ubiquitylation	K114		-0.061	_HSSGCAFLSVK(gl)K_
CAD	Ubiquitylation	K739	-0.732	-0.798	_NSVTGGTAAFEPSVDYCVVK(gl)IPR_
CAD	Ubiquitylation	K760		0.489	_IGSCMK(gl)SVGEVMGIGR_
CAD	Ubiquitylation	K778		-0.005	_SFEEAFQK(gl)ALR_
CAD	Ubiquitylation	K1119		-1.239	_FLSSAAAVSK(gl)EHPVVISK_
CAD	Ubiquitylation	K1211	-0.235	-0.502	_DDQLK(gl)VIECNVR_
CAD	Ubiquitylation	K1309	0.012	-0.277	_AMLSTGFK(gl)IPK_
CAD	Ubiquitylation	K1325	-0.719	-0.613	_NK(gl)SELLPTVR_
CAD	Phosphorylation	S1406	0.530	0.612	_RLS(ph)SFVTK_
CAD	Ubiquitylation	K1411	-0.215	-0.224	_RLSSFVTK(gl)GYR_
CAD	Ubiquitylation	K1460	0.321		_VHVDCMTSQK(gl)LVR_
CAD	Ubiquitylation	K1657	2.804	-1.545	_LGPGK(gl)GEVRPELGSR_
CAD	Phosphorylation	T1827		-1.407	_WPQGAVPQLPPSAPAT(ph)SEMTTTPERPR_
CAD	Phosphorylation	S1859	-0.178	-0.084	_IHRAS(ph)DPGLPAEEPKEK_
CCDC47	Ubiquitylation	K351	-2.212	-0.647	_IMQEEGQPLK(gl)LPDTK_
CCDC47	Ubiquitylation	K356		-0.934	_IMQEEGQPLKLPDTK(gl)R_
CCDC47	Ubiquitylation	K419	0.483		_VEENFLK(gl)LTHVQR_
CCNO	Phosphorylation	S81		-0.913	_GGS(ph)PLPGPAQPVAQLDLQTFR_
CDK5	Ubiquitylation	K56	0.606	0.237	_EICLLK(gl)ELK_
CELF2	Phosphorylation	S21		-0.613	_LDFLPEMMVDHCSLNS(ph)SPVSK_
CELF2	Phosphorylation	S22	-0.868	-0.442	_LDFLPEMMVDHCSLNSS(ph)PVSK_
CELF2	Ubiquitylation	K86	-0.119	0.870	_SQNPPQSK(gl)GCCFVTFYTR_
CELF2	Ubiquitylation	K97	0.573		_K(gl)AALEAQNALHNMK_
CELF2	Ubiquitylation	K464	0.890	0.625	_VFIDK(gl)QTNLSK_
EHMT1	Ubiquitylation	K827	-0.048	0.076	_YLIK(gl)AGALVDPK_
EHMT1	Ubiquitylation	K970	0.967	0.775	_DSDVTLKNK(gl)_
EPOR	Ubiquitylation	K38		-0.982	_FESK(gl)AALLAAR_
FOXA1	Phosphorylation	S331	-0.760	-0.866	_TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK_
FOXC1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXC1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXC1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXC1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXC1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
FOXC2	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXC2	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC2	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC2	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXC2	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXC2	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXC2	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
FOXD2	Phosphorylation	S96		1.395	_GAAAAAGS(ph)PGPGAAAAR_
FOXJ3	Phosphorylation	S221	1.863	0.975	_VTLYNTDQDGS(ph)DSPR_
FOXJ3	Phosphorylation	S223	1.701		_VTLYNTDQDGSDS(ph)PR_
FOXK1	Phosphorylation	S213	-0.810	-0.624	_IQFTSLYHKEEAPAS(ph)PLRPLYPQIS(ph)PLK_
FOXK1	Phosphorylation	S223	-1.752	-1.220	_IQFTSLYHKEEAPAS(ph)PLRPLYPQIS(ph)PLK_
FOXK1	Phosphorylation	S239	-0.701		_SM(ox)VS(ph)PVPSPTGTISVPNSCPAS(ph)PR_
FOXK1	Phosphorylation	S243	-1.155	-0.657	_SM(ox)VSPVPS(ph)PTGTISVPNSCPAS(ph)PR_
FOXK1	Phosphorylation	S257	-0.928	-0.657	_SM(ox)VSPVPS(ph)PTGTISVPNSCPAS(ph)PR_
FOXK1	Ubiquitylation	K353	0.010	-1.365	_SQEEPGK(gl)GSFWR_
FOXK1	Phosphorylation	S416	0.350	-0.992	_S(ph)APAS(ph)PTHPGLMSPR_
FOXK1	Phosphorylation	S420	-0.935	-0.842	_SAPAS(ph)PTHPGLMSPR_
FOXK1	Phosphorylation	S428		0.360	_SAPAS(ph)PTHPGLMS(ph)PR_
FOXK1	Phosphorylation	T436	0.628	0.334	_SGGLQT(ph)PECLS(ph)R_
FOXK1	Phosphorylation	S441	-0.200	-0.052	_SGGLQT(ph)PECLS(ph)R_
FOXK1	Phosphorylation	S445	-0.629	-0.621	_EGS(ph)PIPHDPEFGSK_
FOXK2	Phosphorylation	T13		-0.036	_(ac)AAAAAALSGAGT(ph)PPAGGGAGGGGAGGGGSPPGGWAVAR_
FOXK2	Phosphorylation	S30	1.797	-0.885	_(ac)AAAAAALSGAGTPPAGGGAGGGGAGGGGS(ph)PPGGWAVAR_
FOXK2	Ubiquitylation	K353	0.010	-1.365	_SQEEPGK(gl)GSFWR_
FOXK2	Phosphorylation	S373	-0.698	-0.090	_SAPAS(ph)PNHAGVLSAHSSGAQTPESLSR_
FOXK2	Phosphorylation	S398	-1.237	-1.443	_EGS(ph)PAPLEPEPGAAQPK_
FOXK2	Phosphorylation	S428	0.348	-0.793	_FAQSAPGS(ph)PLSSQPVLITVQR_
FOXO3	Phosphorylation	S12		-1.324	_(ac)AEAPASPAPLS(ph)PLEVELDPEFEPQSRPR_
FOXO3	Phosphorylation	S253		2.510	_AVS(ph)MDNSNKYTK_
FOXO3	Phosphorylation	S284	4.138	6.011	_AALQTAPESADDS(ph)PSQLSK_
FOXO3	Phosphorylation	S421		1.295	_GS(ph)GLGSPTSSFNSTVFGPSSLNSLR_
FOXO3	Phosphorylation	S425		1.471	_GSGLGS(ph)PTSSFNSTVFGPSSLNSLR_
FOXP1	Phosphorylation	S442	1.013	0.678	_RYS(ph)DKYNVPISSADIAQNQEFYK_
GTF2IRD2	Phosphorylation	S16	0.584	0.164	_(ac)AQVAMSTLPVEDEES(ph)SESR_
GTF2IRD2	Phosphorylation	S17	0.428	0.049	_(ac)AQVAM(ox)STLPVEDEESS(ph)ESR_
GTF2IRD2	Phosphorylation	S19		0.274	_(ac)AQVAMSTLPVEDEESSES(ph)R_
GTF2IRD2	Ubiquitylation	K74	0.301	0.254	_DFQK(gl)DFVK_
GTF2IRD2	Ubiquitylation	K130	-0.741	-0.548	_ALGK(gl)STVVPVPYEK_
GTF2IRD2	Phosphorylation	S210	-0.322	-0.436	_SILS(ph)PGGSCGPIK_
GTF2IRD2	Ubiquitylation	K353	0.303	-1.178	_EFNFEK(gl)WNAR_
GTF2IRD2	Ubiquitylation	K378	0.347		_KYAQAIK(gl)AK_
GTF2IRD2	Phosphorylation	S412	1.989	0.874	_RPS(ph)TYGIPR_
GTF2IRD2	Phosphorylation	S515		-0.502	_FEAHPNDLYVEGLPENIPFRS(ph)PSWYGIPR_
GTF2IRD2	Phosphorylation	T556	-0.743	-0.549	_T(ph)NTPVKEDWNVR_
GTF2IRD2	Phosphorylation	T558	0.025	-0.496	_TNT(ph)PVKEDWNVR_
GTF2IRD2	Ubiquitylation	K561	0.309	-0.904	_TNTPVK(gl)EDWNVR_
GTF2IRD2	Ubiquitylation	K752	-0.663		_CGEALGLK(gl)QAVK_
GTF2IRD2	Phosphorylation	S830	1.307		_KINS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER_
GTF2IRD2B	Phosphorylation	S16	0.584	0.164	_(ac)AQVAMSTLPVEDEES(ph)SESR_
GTF2IRD2B	Phosphorylation	S17	0.428	0.049	_(ac)AQVAM(ox)STLPVEDEESS(ph)ESR_
GTF2IRD2B	Phosphorylation	S19		0.274	_(ac)AQVAMSTLPVEDEESSES(ph)R_
GTF2IRD2B	Ubiquitylation	K74	0.301	0.254	_DFQK(gl)DFVK_
GTF2IRD2B	Ubiquitylation	K130	-0.741	-0.548	_ALGK(gl)STVVPVPYEK_
GTF2IRD2B	Phosphorylation	S210	-0.322	-0.436	_SILS(ph)PGGSCGPIK_
GTF2IRD2B	Ubiquitylation	K353	0.303	-1.178	_EFNFEK(gl)WNAR_
GTF2IRD2B	Ubiquitylation	K378	0.347		_KYAQAIK(gl)AK_
GTF2IRD2B	Phosphorylation	S412	1.989	0.874	_RPS(ph)TYGIPR_
GTF2IRD2B	Phosphorylation	S515		-0.502	_FEAHPNDLYVEGLPENIPFRS(ph)PSWYGIPR_
GTF2IRD2B	Phosphorylation	T556	-0.743	-0.549	_T(ph)NTPVKEDWNVR_
GTF2IRD2B	Phosphorylation	T558	0.025	-0.496	_TNT(ph)PVKEDWNVR_
GTF2IRD2B	Ubiquitylation	K561	0.309	-0.904	_TNTPVK(gl)EDWNVR_
GTF2IRD2B	Ubiquitylation	K752	-0.663		_CGEALGLK(gl)QAVK_
GTF2IRD2B	Phosphorylation	S830	1.307		_KINS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER_
HMGCR	Ubiquitylation	K142		-0.522	_ASTLAK(gl)FALSSNSQDEVR_
HMGCR	Ubiquitylation	K248	-3.854	-2.107	_VLEEEENK(gl)PNPVTQR_
HMGCR	Ubiquitylation	K299	-1.680	-0.460	_VSLGLDENVSK(gl)R_
HMGCR	Ubiquitylation	K363		-1.750	_NPITSPVVTQKK(gl)_
HMGCR	Ubiquitylation	K381		-0.848	_NNQK(gl)CDSVEEETGINR_
HMGCR	Ubiquitylation	K401		-3.050	_KVEVIK(gl)PLVAETDTPNR_
HMGCR	Ubiquitylation	K502		-1.382	_K(gl)LSEPSSLQYLPYR_
HMGCR	Ubiquitylation	K633		-1.104	_LQK(gl)LHTSIAGR_
HMGCR	Ubiquitylation	K662		-1.291	_SGDAMGMNMISK(gl)GTEK_
HMGCR	Ubiquitylation	K704		-1.716	_GK(gl)SVVCEAVIPAK(gl)VVR_
HMGCR	Ubiquitylation	K715		-1.982	_SVVCEAVIPAK(gl)VVR_
HMGCR	Ubiquitylation	K873		-1.345	_SK(gl)INLQDLQGACTKK_
HMGCR	Ubiquitylation	K885		-1.690	_SKINLQDLQGACTK(gl)K_
HMGCR	Ubiquitylation	K886		-1.325	_INLQDLQGACTKK(gl)_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
LAMA5	Ubiquitylation	K255		1.313	_EFTK(gl)ATNVR_
LSR	Ubiquitylation	K179	-1.147	0.703	_VVATK(gl)QGNAVTLGDYYQGR_
LSR	Phosphorylation	S321	-1.007		_AATSGVPS(ph)IYAPSTYAHLSPAK_
LSR	Phosphorylation	S332	-0.918	-0.484	_AATSGVPSIYAPSTYAHLS(ph)PAK_
LSR	Phosphorylation	S436		-0.012	_AMSEVTS(ph)LHEDDWR_
LSR	Phosphorylation	S493	0.043	0.475	_S(ph)VDALDDLT(ph)PPSTAESGSR_
LSR	Phosphorylation	T501	-0.058	1.163	_SVDALDDLT(ph)PPSTAESGSR_
LSR	Phosphorylation	S530	0.041	0.994	_S(ph)RDDLYDQDDSR_
LSR	Ubiquitylation	K637	0.966		_LK(gl)KNLALSR_
LSR	Ubiquitylation	K638	0.653	-0.615	_K(gl)NLALSR_
LSR	Phosphorylation	S643	0.927	0.905	_NLALS(ph)RESLVV_
LSR	Phosphorylation	S646		0.872	_NLALSRES(ph)LVV_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
PGM3	Phosphorylation	T90	0.252	0.400	_STIGVMVT(ph)ASHNPEEDNGVK_
PGM3	Phosphorylation	S92	0.330	0.265	_STIGVMVTAS(ph)HNPEEDNGVK_
PGM3	Ubiquitylation	K205		0.083	_YGK(gl)ATIEGYYQK_
PGM3	Ubiquitylation	K214		-0.055	_ATIEGYYQK(gl)LSK_
PGM3	Ubiquitylation	K224		-0.365	_AFVELTK(gl)QASCSGDEYR_
PGM3	Ubiquitylation	K237	-0.071	-1.543	_SLK(gl)VDCANGIGALK_
PGM3	Ubiquitylation	K378		-0.453	_VPVYCTK(gl)TGVK_
POFUT1	Ubiquitylation	K246		0.737	_IGSDWK(gl)NACAMLK_
POLR1B	Ubiquitylation	K70		-0.356	_EQQK(gl)AALQELTR_
POLR1B	Ubiquitylation	K132		-0.885	_GTICK(gl)EANVYPAECR_
POLR1B	Ubiquitylation	K518		-1.235	_GADFAK(gl)MR_
POLR1B	Ubiquitylation	K882	0.509	0.340	_SK(gl)ENCVVDNIK_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
PSEN2	Phosphorylation	S58	-0.112	-0.130	_TSLM(ox)SAES(ph)PTPR_
RAB14	Ubiquitylation	K170	-1.161		_TGENVEDAFLEAAK(gl)K_
RAB14	Ubiquitylation	K171	-1.161	-0.915	_TGENVEDAFLEAAKK(gl)_
RAB14	Ubiquitylation	K193		-0.640	_IYQNIQDGSLDLNAAESGVQHK(gl)PSAPQGGR_
RACGAP1	Ubiquitylation	K53	0.960		_TDHELGK(gl)YK_
RACGAP1	Ubiquitylation	K60	1.380		_DLLMK(gl)AETER_
RACGAP1	Ubiquitylation	K71	0.352	0.233	_SALDVK(gl)LK_
RACGAP1	Ubiquitylation	K84	0.484	0.846	_NQVDVEIK(gl)RR_
RACGAP1	Ubiquitylation	K95	-0.492		_AEADCEK(gl)LER_
RACGAP1	Ubiquitylation	K199	-2.285	-0.347	_QFVDGPPGPVK(gl)K_
RACGAP1	Ubiquitylation	K200	-0.365	-0.347	_QFVDGPPGPVKK(gl)_
RACGAP1	Phosphorylation	S203	1.255	0.831	_S(ph)IGSAVDQGNESIVAK_
RACGAP1	Ubiquitylation	K292	-0.427		_LHDFVSK(gl)TVIKPESCVPCGK_
RACGAP1	Ubiquitylation	K305	-0.770		_TVIKPESCVPCGK(gl)R_
RACGAP1	Phosphorylation	T342	-1.072	-0.919	_DRCPLPCIPTLIGT(ph)PVK_
RACGAP1	Ubiquitylation	K404	-0.200		_VK(gl)TVPLLSK_
RACGAP1	Ubiquitylation	K490	0.528		_VAQSPHTK(gl)MDVANLAK_
RACGAP1	Phosphorylation	T580	-0.839		_VSLLGPVTT(ph)PEHQLLK_
RACGAP1	Ubiquitylation	K587	-0.985		_VSLLGPVTTPEHQLLK(gl)TPSSSSLSQR_
RACGAP1	Phosphorylation	S590	-0.415	-0.021	_TPS(ph)SSSLSQR_
RACGAP1	Phosphorylation	S591		-0.217	_TPSS(ph)SSLSQR_
RACGAP1	Ubiquitylation	K604	0.953		_STLTK(gl)NTPR_
RICTOR	Phosphorylation	S21	-0.279	0.249	_NDS(ph)GEENVPLDLTR_
RICTOR	Ubiquitylation	K830	-0.874		_GYVAKQLEK(gl)_
RICTOR	Phosphorylation	S1284	2.625		_SNS(ph)VSLVPPGSSHTLPR_
RICTOR	Phosphorylation	S1302	-0.560	0.260	_RAQS(ph)LKAPSIATIK_
RICTOR	Phosphorylation	S1388	0.507		_ALSYAS(ph)LDKEDLLSPINQNTLQR_
SMARCA5	Phosphorylation	S66	-0.501	-0.553	_GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGKQK_
SMARCA5	Phosphorylation	S116	0.045	-0.051	_TPTS(ph)PLK_
SMARCA5	Ubiquitylation	K160	0.340		_TEQEEDEELLTESSK(gl)ATNVCTR_
SMARCA5	Ubiquitylation	K319		-0.811	_SK(gl)LSEIVR_
SMARCA5	Ubiquitylation	K691	0.305		_KTAEMNEK(gl)LSK_
SMARCA5	Ubiquitylation	K694	1.235		_LSK(gl)MGESSLR_
SMARCA5	Ubiquitylation	K799	0.558	0.382	_TIGYK(gl)VPR_
SMARCA5	Ubiquitylation	K847		0.509	_LLTQGFTNWNK(gl)R_
SMARCA5	Ubiquitylation	K855		0.872	_DFNQFIK(gl)ANEK_
SMARCA5	Ubiquitylation	K929	0.067	-1.279	_YK(gl)APFHQLR_
TDG	Ubiquitylation	K103		0.728	_ITDTFK(gl)VKR_
TDG	Ubiquitylation	K105		1.500	_ITDTFKVK(gl)_
TDG	Ubiquitylation	K201	-0.531	0.797	_TTPGSK(gl)DLSSK(gl)EFR_
TDG	Ubiquitylation	K206	0.334	1.024	_TTPGSK(gl)DLSSK(gl)EFR_
TDG	Ubiquitylation	K218		1.203	_ILVQK(gl)LQK_
TDG	Ubiquitylation	K221		1.524	_LQK(gl)YQPR_
TDG	Ubiquitylation	K246	0.699	1.949	_EVFGVK(gl)VK_
TDG	Ubiquitylation	K285		1.047	_AQDK(gl)VHYYIK_
TDG	Ubiquitylation	K293		1.411	_LK(gl)DLRDQLK_
TDG	Ubiquitylation	K300		0.980	_DQLK(gl)GIER_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFBR1	Ubiquitylation	K449	-0.991		_VVCEQK(gl)LRPNIPNR_
TGFBR1	Ubiquitylation	K502	0.553	0.430	_TLSQLSQQEGIK(gl)M_
TIMELESS	Ubiquitylation	K528		-0.868	_GNLVVQNK(gl)QK_
TIMELESS	Ubiquitylation	K530		-0.868	_GNLVVQNK(gl)QK_
TIMELESS	Phosphorylation	S1087	0.076	-0.254	_LS(ph)PTQLR_
TIMELESS	Phosphorylation	S1149	1.556	1.776	_KAGLAS(ph)PEEEDAVGKEPLK_
TIMELESS	Phosphorylation	S1173		0.502	_RQLLDS(ph)DEEQEEDEGR_
TPM1	Ubiquitylation	K30	-1.537		_AEQAEADKK(gl)AAEDR_
TRIP12	Phosphorylation	S354	-0.672	-0.510	_RSES(ph)PPAELPSLR_
TRIP12	Phosphorylation	S990		-1.351	_HLAESESLLTS(ph)PPK_
TRIP12	Phosphorylation	S1039	-1.279	-0.356	_DDSLDLS(ph)PQGR_
TRIP12	Ubiquitylation	K1049	0.143	0.864	_LSDVLK(gl)R_
TRIP12	Phosphorylation	S1064	0.034	-0.036	_YS(ph)PPRDDDKVDNQAK_
TRIP12	Ubiquitylation	K1086	-1.660	-1.398	_SPTTTQSPK(gl)SSFLASLNPK_
TRIP12	Ubiquitylation	K1096	2.593		_SSFLASLNPK(gl)TWGR_
TRIP12	Ubiquitylation	K1473		-0.085	_AQTAPTK(gl)TSPR_
TRIP12	Ubiquitylation	K1709	-0.044	-0.188	_GEEVTLSNPK(gl)GSQEGTK_
TSC1	Phosphorylation	S505	0.141	0.350	_GGFDS(ph)PFYR_
TWSG1	Ubiquitylation	K192		1.435	_ISCESMGASK(gl)YR_
UBR3	Ubiquitylation	K1045	-0.708		_K(gl)FQEIINR_
UBR3	Ubiquitylation	K1480	-0.029	-0.307	_GGNLCSGGASTAGK(gl)R_
USP22	Ubiquitylation	K35		0.350	_VDNWK(gl)QNLR_
USP22	Ubiquitylation	K152	-1.310	-0.895	_FSTWEPTK(gl)R_
USP22	Ubiquitylation	K159	-0.035	-0.557	_ELELLK(gl)HNPK_
USP22	Ubiquitylation	K166	-0.657	-0.098	_K(gl)ITSNCTIGLR_
USP22	Ubiquitylation	K382	-0.028	-1.061	_IK(gl)CSGCHSYQESTK_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_
ZFX	Phosphorylation	S313	-0.303	-0.112	_ADPGEDDLGGTVDIVES(ph)EPENDHGVELLDQNSSIR_