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Query: LSR

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LSR 0 3.568 0.373 -0.563

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LSR Phosphorylation T501 -0.058 1.163 _SVDALDDLT(ph)PPSTAESGSR_
LSR Phosphorylation S530 0.041 0.994 _S(ph)RDDLYDQDDSR_
LSR Phosphorylation S643 0.927 0.905 _NLALS(ph)RESLVV_
LSR Phosphorylation S646 0.872 _NLALSRES(ph)LVV_
LSR Ubiquitylation K179 -1.147 0.703 _VVATK(gl)QGNAVTLGDYYQGR_
LSR Phosphorylation S493 0.043 0.475 _S(ph)VDALDDLT(ph)PPSTAESGSR_
LSR Phosphorylation S436 -0.012 _AMSEVTS(ph)LHEDDWR_
LSR Phosphorylation S332 -0.918 -0.484 _AATSGVPSIYAPSTYAHLS(ph)PAK_
LSR Ubiquitylation K638 0.653 -0.615 _K(gl)NLALSR_
LSR Phosphorylation S321 -1.007 _AATSGVPS(ph)IYAPSTYAHLSPAK_
LSR Ubiquitylation K637 0.966 _LK(gl)KNLALSR_

Background Information for LSR:


Pubmed-LSR »
Uniprot-LSR »
Biogrid-LSR »
ProteomicsDB-LSR »

Tumorportal-LSR »
COSMIC-LSR »
GenomeRNAi-LSR »
Genecards-LSR


Protein-protein Interactions for LSR
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BMPR1A Cat. description Hein, Mann, Cell 2015
Category members IP bait UFL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ACCN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ADAM33 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C19orf46 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLEC2D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GGT7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR114 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL9R Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LSR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NRG1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHAC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPINT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM30A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LSR
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ig-like_dom IPR007110 0.6
Category members Ig_sub IPR003599 0.43
Category members LISCH7 IPR008664 0


Protein complexes (CORUM database) featuring LSR
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LSR
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0001889 liver development Database 0.51
Category members GO Category GO:0009790 embryo development Database 0
Category members GO Category GO:0019216 regulation of lipid metabolic process Database 0
Category members GO Category GO:0034361 very-low-density lipoprotein particle Database 0
Category members GO Category GO:0034362 low-density lipoprotein particle Database 0
Category members GO Category GO:0042627 chylomicron Database 0


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