bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: FOXD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FOXD2 0 2.285 -1.070 0.890

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FOXD2 Phosphorylation S96 1.395 _GAAAAAGS(ph)PGPGAAAAR_

Background Information for FOXD2:





Protein-protein Interactions for FOXD2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CGRRF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXD4L6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in FOXD2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TF_fork_head IPR001766 0


Protein complexes (CORUM database) featuring FOXD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FOXD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003690 double-stranded DNA binding Database 0.66
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0008134 transcription factor binding Database 0.37
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0007389 pattern specification process Database 0.18
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0048846 axon extension involved in axon guidance Database 0.05
Category members GO Category GO:0051090 regulation of sequence-specific DNA binding transcription factor activity Database 0.02
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0001658 branching involved in ureteric bud morphogenesis Database 0
Category members GO Category GO:0001755 neural crest cell migration Database 0
Category members GO Category GO:0001822 kidney development Database 0
Category members GO Category GO:0003705 RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007422 peripheral nervous system development Database 0
Category members GO Category GO:0008301 DNA binding, bending Database 0
Category members GO Category GO:0009790 embryo development Database 0
Category members GO Category GO:0030318 melanocyte differentiation Database 0
Category members GO Category GO:0048484 enteric nervous system development Database 0
Category members GO Category GO:0048485 sympathetic nervous system development Database 0
Category members GO Category GO:0048937 lateral line nerve glial cell development Database 0
Category members GO Category GO:0050935 iridophore differentiation Database 0
Category members GO Category GO:0051216 cartilage development Database 0


© Copyright Svejstrup Laboratory 2015