RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PITX1	1	3.150	-0.920
MSX2	1	-0.260	0.240
BBS2	1	-0.810	0.820
CREB3L2	1	-2.290	4.300
PKD1	0	-0.900	0.980
CD44	0	0.270	-0.230
FGFR3	0	-1.120	1.390
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750	-0.166	-0.094	0.032	0.420	0.504
HIF1A	0	-0.480	0.400
BMP7	0
MAPK3	0
BMPR1A	0	0.020	-0.130
SOX6	0	1.430	-0.800
SMAD5	0	0.640	-0.430
WNT5A	0
DLX2	0	-0.930	1.950		-1.286	0.204
SATB2	0	0.770	-0.700	-0.631	-0.952	-0.199	0.105	0.377
SOX5	0	-0.800	0.810
ZEB1	0	0.640	-0.450
ZEB1	0	0.640	-0.450
BMP6	0	1.970	-0.630
MSX1	0	0.420	-0.450
ATP7A	0	-0.210	0.370
ESRRA	0	-0.770	0.700				0.047	0.181
TYMS	0	-1.190	1.570
FOXD2	0	-1.070	0.890

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATP7A	Ubiquitylation	K333	0.029		_K(gl)AIEAVSPGLYR_
BBS2	Ubiquitylation	K231		-0.482	_FGYALSNGTVGVYDK(gl)TSR_
BBS2	Ubiquitylation	K360		-1.721	_NYEENAK(gl)AELASPLNEADGHR_
BBS2	Phosphorylation	S365		2.366	_AELAS(ph)PLNEADGHR_
BBS2	Ubiquitylation	K659		-0.582	_DLLNGYK(gl)IR_
BMP6	Ubiquitylation	K409		-1.025	_VSSASDYNSSELK(gl)TACR_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
BMPR1A	Ubiquitylation	K232	-0.391	0.172	_TIAK(gl)QIQMVR_
BMPR1A	Ubiquitylation	K477	0.265	-0.134	_EVVCVK(gl)R_
CD44	Ubiquitylation	K739	-0.024	0.134	_NLQNVDMK(gl)IGV_
CREB3L2	Ubiquitylation	K364		-0.016	_LQTLVMGK(gl)VSR_
DLX2	Phosphorylation	S225		-0.821	_SGEIPSEQHPGAS(ph)AS(ph)PPCASPPVSAPASWDFGVPQR_
DLX2	Phosphorylation	S227		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DLX2	Phosphorylation	S232		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
FGFR3	Ubiquitylation	K205		-0.115	_IGGIK(gl)LR_
FOXD2	Phosphorylation	S96		1.395	_GAAAAAGS(ph)PGPGAAAAR_
GNAS	Ubiquitylation	K8	0.430	0.328	_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K17	-0.011		_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K32	0.249	-0.446	_QLQK(gl)DKQVYR_
GNAS	Ubiquitylation	K58	-1.182	0.161	_STIVK(gl)QM(ox)R_
GNAS	Ubiquitylation	K92	-1.333	-0.290	_ATK(gl)VQDIKNNLK_
GNAS	Ubiquitylation	K97		0.076	_VQDIK(gl)NNLK_
GNAS	Ubiquitylation	K167	-1.721		_LHALK(gl)LR_
GNAS	Ubiquitylation	K301	-0.955	-0.198	_QDLLAEK(gl)VLAGK_
GNAS	Ubiquitylation	K308		-0.472	_SK(gl)IEDYFPEFAR_
HIF1A	Ubiquitylation	K10		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K11		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K173		-0.662	_MK(gl)CTLTSR_
HIF1A	Ubiquitylation	K186		-0.590	_TMNIK(gl)SATWK_
HIF1A	Ubiquitylation	K252		-0.784	_HSLDM(ox)K(gl)FSYCDER_
HIF1A	Ubiquitylation	K371		-0.508	_PVESSDMK(gl)MTQLFTK_
HIF1A	Ubiquitylation	K378		-0.077	_MTQLFTK(gl)VESEDTSSLFDK_
HIF1A	Ubiquitylation	K390		-0.348	_VESEDTSSLFDK(gl)LKK_
HIF1A	Ubiquitylation	K392		-0.546	_VESEDTSSLFDKLK(gl)_
HIF1A	Ubiquitylation	K393		-0.451	_VESEDTSSLFDKLKK(gl)_
HIF1A	Ubiquitylation	K710		-1.696	_TTVPEEELNPK(gl)ILALQNAQR_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
MSX1	Phosphorylation	S154		0.148	_RLS(ph)PPACTLR_
MSX2	Phosphorylation	S3	-1.986	-1.774	_(ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S5	-1.986		_AS(ph)PS(ph)KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S63		3.351	_EAS(ph)PLPAESASAGATLRPLLLSGHGAR_
MSX2	Phosphorylation	S91	-0.783	-0.727	_EAHS(ph)PGPLVKPFETASVK_
MSX2	Phosphorylation	S123		-0.062	_SENSEDGAAWMQEPGRYS(ph)PPPR_
PITX1	Ubiquitylation	K5		1.200	_DAFK(gl)GGM(ox)SLER_
PKD1	Phosphorylation	T867		0.841	_GT(ph)YHVRLEVNNTVSGAAAQADVR_
SATB2	Phosphorylation	S50	-0.357		_SGS(ph)PDVKGPPPVK_
SATB2	Phosphorylation	S623	-2.108	-2.019	_ES(ph)SPPREEAPPPPPPTEDSCAK_
SATB2	Phosphorylation	S624	-2.108	-2.019	_ES(ph)SPPREEAPPPPPPTEDSCAK_
SMAD5	Ubiquitylation	K64	-2.082	-1.647	_ALSSPGQPSK(gl)CVTIPR_
SOX5	Phosphorylation	S21		0.635	_RPAS(ph)PYGEADGEVAMVTSR_
SOX5	Phosphorylation	S370		-0.512	_LPGIPQGNLGAAVS(ph)PTSIHTDK_
SOX6	Phosphorylation	S98	-0.827	-0.182	_NTSTS(ph)PHKPDEGSR_
TYMS	Ubiquitylation	K99		-0.992	_GSTNAK(gl)ELSSK_
TYMS	Ubiquitylation	K104		-0.543	_ELSSK(gl)GVK_
TYMS	Ubiquitylation	K169	-0.801	-0.836	_VIDTIK(gl)TNPDDRR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_
ZEB1	Ubiquitylation	K77	0.237		_FTSLK(gl)EHIK_
ZEB1	Ubiquitylation	K398	-0.697	0.131	_SEK(gl)LPEDLTVK_
ZEB1	Phosphorylation	S713	-0.669	-0.753	_NNDQPQSANANEPQDSTVNLQS(ph)PLK_
ZEB1	Phosphorylation	S1025		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZEB1	Phosphorylation	T1026		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_