RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RFC1	3	2.530	-1.230		0.635	1.060	1.028	0.826
JUN	3	-0.930	0.930			-0.126
YBX2	2	0.320	-0.460		0.674	0.402	-1.244	-0.405
YBX1	2	-0.180	-0.010		-0.197	-0.190	-1.344	-0.617
RAD51AP1	2	1.090	-0.930
MSH6	2	-0.410	0.140	-0.115	0.232	0.645	0.407	0.101
ZNF148	2	-2.240	3.630	1.104	-0.112	0.692	0.515	0.669
ZNF148	2	-1.020	0.900	1.104	-0.112	0.692	0.515	0.669
HMGB1	2	-1.590	3.400		2.856	-1.899	0.030	-0.792
FOXC1	1	-2.160	3.640	-1.217	-0.424	0.659
MSH2	1	-0.130	0.010	0.224	0.457	0.838	0.840	0.366
USF2	1	0.080	-0.210		0.151	-0.093
USF2	1	0.080	-0.210				0.695	4.891
NEIL3	1	2.830	-1.410
JUND	1	0.270	0.190
ERCC5	1	-2.410	5.420
TDG	1	1.400	-0.150
PURB	1	-1.320	2.550
HNRNPDL	1	-0.120	0.440	-0.222	-0.668	-0.303	-0.338	-0.010
SAFB	1	-0.100	0.300	0.199	-0.309	0.131	0.259	0.318
CGGBP1	1	-2.200	4.120				1.269	0.801
SP3	1	2.510	-0.930	-0.403			0.807	0.836
MRE11A	0	1.600	-0.730		0.145	0.420
MRE11A	0	1.600	-0.730	0.023			0.453	0.150
PNKP	0	1.170	-0.260	-1.642			0.133	0.861
RAD51	0	-1.260	1.920
NTHL1	0	0.810	-0.080				1.191	1.167
ZNF638	0	0.260	-0.470	0.646	-0.149	-0.557	0.575	0.264
FOSL2	0	0.940	-0.940
XRCC5	0	1.940	-0.800	0.205	-0.587	0.234	-0.176	0.162
PIN4	0	1.880	-1.000				0.282
PIN4	0	1.880	-1.000
AKAP8	0	0.320	-0.070	-0.298	-2.349	-1.071	-0.487	-0.383
NFKB1	0	0.720	-0.810
STAT1	0	-0.550	0.170
TARDBP	0	-1.050	1.160	-0.359	-1.276	-0.495	-0.408	0.021
MTERF1	0	1.060	-0.030				0.518	0.771
FOXA1	0	1.190	-0.010
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
NFIC	0	-0.620	0.210
NFIC	0	-0.620	0.210	-0.711	0.025	0.306		1.031
EGFR	0	-0.580	0.520				0.513	0.090
NFIB	0	-1.030	1.080	-0.711	0.025	0.306		1.031
ZEB1	0	0.640	-0.450
ZEB1	0	0.640	-0.450
KIN	0	0.730	-0.670				0.069	0.106
RBMS1	0	0.370	-0.070
RBMS1	0	0.990	-0.670
RBMS1	0	0.370	-0.070				0.644
RBMS1	0	0.990	-0.670				0.644
CEBPG	0	-1.150	1.620
USF1	0	-0.540	1.070		0.151	-0.093
IFI16	0	0.400	-0.680				0.620	0.590
HMGB2	0	-0.350	0.170			-1.810	0.655	0.285
SMAD3	0	-1.560	1.800
SMAD3	0	0.270	-0.340
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
FEN1	0	-1.360	2.210	0.895	1.036	-1.389	-0.361	-0.414
JUNB	0	0.350	-0.410
STAT5B	0	0.670	-0.960
SMAD2	0
FOXG1	0	-0.510	1.000	-1.217	-0.424	0.659
FOXG1	0	0.550	-0.250	-1.217	-0.424	0.659
SATB1	0	1.140	-1.300		-0.866	0.000
PURA	0	-0.470	0.870		0.337		-0.566	0.873
SP1	0			0.404			0.333	0.650
FOXD2	0	-1.070	0.890
XRCC6	0	0.960	-0.800
XRCC6	0	0.960	-0.800	-0.089	-0.758	0.145	0.033	0.140
POU3F4	0	0.700	-0.280

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKAP8	Phosphorylation	S323	0.594	0.255	_VDS(ph)EGDFS(ph)ENDDAAGDFR_
AKAP8	Phosphorylation	S328	-0.384	-0.035	_VDSEGDFS(ph)ENDDAAGDFR_
CEBPG	Ubiquitylation	K98	-0.339		_VNQLK(gl)EENERLEAK_
CEBPG	Ubiquitylation	K113	0.032	0.273	_LLTK(gl)ELSVLK_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
EGFR	Phosphorylation	T693	0.486	-0.139	_ELVEPLT(ph)PSGEAPNQALLR_
EGFR	Phosphorylation	S991		-0.041	_MHLPS(ph)PTDSNFYR_
ERCC5	Phosphorylation	S766	-0.289	-0.748	_LKTEKEPDATPPS(ph)PR_
ERCC5	Phosphorylation	S809	-0.115	0.693	_NAPAAVDEGSIS(ph)PR_
ERCC5	Ubiquitylation	K858	0.818	1.193	_INSSTENSDEGLK(gl)VR_
ERCC5	Phosphorylation	S951	-0.018	-0.048	_ELTPAS(ph)PTCTNSVSK_
ERCC5	Phosphorylation	S988	0.598	1.186	_FDSSLLSS(ph)DDETK_
FEN1	Ubiquitylation	K354	1.109		_VTGSLSSAK(gl)R_
FOSL2	Phosphorylation	S200		-0.517	_S(ph)PPAPGLQPMR_
FOXA1	Phosphorylation	S331	-0.760	-0.866	_TGQLEGAPAPGPAAS(ph)PQTLDHSGATATGGASELK_
FOXC1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXC1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXC1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXC1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXC1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXC1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
FOXD2	Phosphorylation	S96		1.395	_GAAAAAGS(ph)PGPGAAAAR_
FOXG1	Phosphorylation	S6	0.325	0.055	_YS(ph)VSSPNSLGVVPYLGGEQSYYR_
FOXG1	Phosphorylation	S235		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S241		-1.239	_TENGTCPS(ph)PPQPLS(ph)PAAALGSGSAAAVPK_
FOXG1	Phosphorylation	S259	-0.376	-0.198	_IES(ph)PDSSSSSLSSGSSPPGSLPSAR_
FOXG1	Phosphorylation	S320	0.313	0.178	_GS(ph)PQSAAAELSSGLLASAAASSR_
FOXG1	Phosphorylation	S323		0.347	_GSPQS(ph)AAAELSSGLLASAAASSR_
FOXG1	Ubiquitylation	K554	-0.030	0.013	_TSGAFVYDCSK(gl)F_
HMGB1	Ubiquitylation	K50	0.651		_WK(gl)TMSAK_
HMGB1	Ubiquitylation	K59	1.001	0.009	_GK(gl)FEDMAK_
HMGB1	Ubiquitylation	K114		0.314	_IK(gl)GEHPGLSIGDVAK_
HMGB1	Ubiquitylation	K127	0.018		_IKGEHPGLSIGDVAK(gl)K_
HMGB1	Ubiquitylation	K128	-0.407		_K(gl)LGEMWNNTAADDKQPYEK_
HMGB1	Ubiquitylation	K157	0.850		_YEK(gl)DIAAYR_
HMGB2	Ubiquitylation	K114	0.323		_IK(gl)SEHPGLSIGDTAK_
HMGB2	Ubiquitylation	K128	0.363		_K(gl)LGEMWSEQSAK_
HMGB2	Ubiquitylation	K147	0.205	-0.408	_DKQPYEQK(gl)AAK_
HMGB2	Ubiquitylation	K150	-0.251		_DKQPYEQKAAK(gl)_
HNRNPDL	Ubiquitylation	K76	2.391	1.465	_LAGGAAIK(gl)GGR_
HNRNPDL	Ubiquitylation	K180	-0.288		_FGEVVDCTIK(gl)TDPVTGR_
HNRNPDL	Ubiquitylation	K209	0.789		_VLELK(gl)EHK_
HNRNPDL	Ubiquitylation	K302	0.792	0.269	_YHQIGSGK(gl)CEIK_
HNRNPDL	Ubiquitylation	K306	0.186	0.500	_CEIK(gl)VAQPK_
JUN	Phosphorylation	S58	-0.167	-1.247	_AKNS(ph)DLLTSPDVGLLK_
JUN	Phosphorylation	T62	2.545	1.674	_NSDLLT(ph)SPDVGLLK_
JUN	Phosphorylation	S63	2.030	1.458	_NSDLLTS(ph)PDVGLLK_
JUN	Ubiquitylation	K70	9.213		_NSDLLTSPDVGLLK(gl)_
JUN	Phosphorylation	S73	1.499	0.845	_LAS(ph)PELER_
JUN	Phosphorylation	S243	-0.642	-1.399	_LQALKEEPQTVPEMPGETPPLS(ph)PIDMESQER_
JUN	Ubiquitylation	K309	1.034	0.155	_EQVAQLK(gl)QK_
JUNB	Phosphorylation	T255		-0.205	_DAT(ph)PPVS(ph)PINMEDQER_
JUNB	Phosphorylation	S259		-0.205	_DAT(ph)PPVS(ph)PINMEDQER_
JUND	Phosphorylation	S90	2.088	1.448	_ADGAPSAAPPDGLLAS(ph)PDLGLLK_
JUND	Phosphorylation	S255	-1.629	-1.982	_LAALKDEPQTVPDVPSFGES(ph)PPLSPIDMDTQER_
JUND	Phosphorylation	S259		-0.855	_LAALKDEPQTVPDVPSFGESPPLS(ph)PIDMDTQER_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
MRE11A	Ubiquitylation	K387	0.442		_FSQK(gl)FVDR_
MSH2	Ubiquitylation	K212		-0.233	_ECVLPGGETAGDMGK(gl)LR_
MSH2	Ubiquitylation	K249	0.461		_K(gl)GEQMNSAVLPEMENQVAVSSLSAVIK_
MSH2	Ubiquitylation	K347		2.867	_LVNQWIK(gl)QPLMDK_
MSH2	Ubiquitylation	K531	1.040		_VTCKEEK(gl)VLR_
MSH2	Ubiquitylation	K555		0.164	_FTNSK(gl)LTSLNEEYTK_
MSH2	Ubiquitylation	K635		-0.376	_IILK(gl)ASR_
MSH6	Phosphorylation	S41	-0.708	-0.948	_AAAAPGAS(ph)PSPGGDAAWSEAGPGPRPLAR_
MSH6	Phosphorylation	S43	0.319	-0.234	_AAAAPGASPS(ph)PGGDAAWSEAGPGPR_
MSH6	Phosphorylation	S137	0.203	0.359	_VHVQFFDDS(ph)PTR_
MSH6	Phosphorylation	T139	0.209		_VHVQFFDDSPT(ph)R_
MSH6	Phosphorylation	S227	-0.199	-0.192	_SEEDNEIES(ph)EEEVQPK_
MSH6	Ubiquitylation	K334		0.193	_QATSISSETK(gl)NTLR_
MSH6	Ubiquitylation	K476	1.536	0.184	_YSDSLVQK(gl)GYK_
MSH6	Ubiquitylation	K519	2.264	0.186	_IITK(gl)GTQTYSVLEGDPSENYSK_
MSH6	Ubiquitylation	K728	0.082	-0.280	_SGAIFTK(gl)AYQR_
MSH6	Ubiquitylation	K771	-0.582	-1.069	_VDTCHTPFGK(gl)R_
MSH6	Phosphorylation	S830	0.130	1.666	_IHNVGS(ph)PLK_
MSH6	Ubiquitylation	K852		-0.044	_AIMYEETTYSK(gl)K_
MSH6	Ubiquitylation	K853		-0.044	_AIMYEETTYSK(gl)K_
MSH6	Ubiquitylation	K896		-0.342	_QVISLQTK(gl)NPEGR_
MSH6	Ubiquitylation	K997		-0.863	_NLPEEYELK(gl)STK_
MSH6	Ubiquitylation	K1009		-0.817	_YWTK(gl)TIEK_
MSH6	Ubiquitylation	K1030	0.394	-0.156	_DVSLK(gl)DCMR_
MSH6	Ubiquitylation	K1240		-0.672	_ELAETIK(gl)CR_
MSH6	Ubiquitylation	K1291		0.633	_FIK(gl)GACPK_
MSH6	Ubiquitylation	K1296		-1.142	_GACPK(gl)SYGFNAAR_
MSH6	Ubiquitylation	K1315		-1.738	_LANLPEEVIQK(gl)GHR_
MSH6	Ubiquitylation	K1325		-0.190	_EFEK(gl)MNQSLR_
NEIL3	Ubiquitylation	K13		-1.903	_VEGPGCTLNGEK(gl)IR_
NEIL3	Ubiquitylation	K291		-0.197	_ENPQHVDICK(gl)LPTR_
NFIB	Phosphorylation	S294		-1.873	_TISIDENM(ox)EPSPTGDFYPSPS(ph)SPAAGSR_
NFIB	Phosphorylation	S295	-1.280		_TISIDENMEPSPTGDFYPSPSS(ph)PAAGSR_
NFIB	Phosphorylation	S300	-1.728		_TISIDENM(ox)EPSPTGDFYPSPSSPAAGS(ph)R_
NFIB	Phosphorylation	S311	1.021	0.671	_DQDMS(ph)SPTTM(ox)K_
NFIB	Phosphorylation	S312	0.764	0.746	_DQDMSS(ph)PTTMK_
NFIB	Phosphorylation	T314		0.827	_DQDMSSPT(ph)TMK_
NFIB	Phosphorylation	S325		0.852	_KPEKPLFS(ph)SASPQDSSPR_
NFIB	Phosphorylation	S328	1.295	0.637	_KPEKPLFSSAS(ph)PQDSSPR_
NFIB	Phosphorylation	S332	-0.428	-1.102	_KPEKPLFSSASPQDS(ph)SPR_
NFIB	Phosphorylation	S333	-0.428		_KPEKPLFSSASPQDS(ph)SPR_
NFIC	Phosphorylation	S294	-0.140	-0.153	_SGSMEEDVDTS(ph)PGGDYYTSPS(ph)SPTSSSR_
NFIC	Phosphorylation	S294		-1.873	_TISIDENM(ox)EPSPTGDFYPSPS(ph)SPAAGSR_
NFIC	Phosphorylation	S295	-1.280		_TISIDENMEPSPTGDFYPSPSS(ph)PAAGSR_
NFIC	Phosphorylation	S300	-1.728		_TISIDENM(ox)EPSPTGDFYPSPSSPAAGS(ph)R_
NFIC	Phosphorylation	S304	-0.547	-0.146	_SGSMEEDVDTSPGGDYYTSPS(ph)SPTSSSR_
NFIC	Phosphorylation	S305	-0.748	-0.199	_SGSMEEDVDTSPGGDY(ph)YTSPSS(ph)PTSSSR_
NFIC	Phosphorylation	S311	1.021	0.671	_DQDMS(ph)SPTTM(ox)K_
NFIC	Phosphorylation	S312	0.764	0.746	_DQDMSS(ph)PTTMK_
NFIC	Phosphorylation	T314		0.827	_DQDMSSPT(ph)TMK_
NFIC	Phosphorylation	S322	0.191	0.020	_NWTEDMEGGIS(ph)SPVKK_
NFIC	Phosphorylation	S323	0.317	0.328	_NWTEDM(ox)EGGISS(ph)PVKK_
NFIC	Phosphorylation	S325		0.852	_KPEKPLFS(ph)SASPQDSSPR_
NFIC	Phosphorylation	S328	1.295	0.637	_KPEKPLFSSAS(ph)PQDSSPR_
NFIC	Phosphorylation	S332	-0.428	-1.102	_KPEKPLFSSASPQDS(ph)SPR_
NFIC	Phosphorylation	S333	0.309	-0.312	_TEMDKS(ph)PFNSPSPQDSPR_
NFIC	Phosphorylation	S333	-0.428		_KPEKPLFSSASPQDS(ph)SPR_
NFIC	Phosphorylation	S339	-1.705	-1.357	_SPFNSPS(ph)PQDSPR_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
PIN4	Ubiquitylation	K75	0.819		_FNEVAAQYSEDK(gl)AR_
PNKP	Phosphorylation	T118	-2.016	-2.084	_TPESQPDT(ph)PPGTPLVSQDEK_
PNKP	Ubiquitylation	K226	0.178		_GK(gl)LPAEEFK_
POU3F4	Ubiquitylation	K377	0.051	-0.035	_LK(gl)PLLNK_
PURA	Ubiquitylation	K97	0.301		_IAEVGAGGNK(gl)SR_
PURB	Phosphorylation	S6	-0.526	0.688	_(ac)ADGDS(ph)GSERGGGGGPCGFQPASR_
PURB	Phosphorylation	S8		0.527	_(ac)ADGDSGS(ph)ERGGGGGPCGFQPASR_
PURB	Ubiquitylation	K70	1.141		_IAEVGAGGSK(gl)SR_
PURB	Phosphorylation	S100	0.095	0.006	_DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPR_
PURB	Phosphorylation	S101	-0.621	-0.506	_DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPR_
PURB	Phosphorylation	S304	0.666	0.610	_RGGGSGGGEES(ph)EGEEVDED_
RAD51	Ubiquitylation	K64	-1.228		_KELINIK(gl)GISEAK_
RAD51AP1	Phosphorylation	S120	1.965	3.112	_ELPTVTTNVQNS(ph)QDKSIEK_
RAD51AP1	Phosphorylation	S294	-0.337	0.317	_KPLEIRS(ph)PSAESK_
RBMS1	Ubiquitylation	K87	-0.441	-0.948	_LCQPYGK(gl)IVSTK_
RBMS1	Ubiquitylation	K97	-1.200		_AILDK(gl)TTNK_
RBMS1	Ubiquitylation	K124	-0.015	0.679	_AVSALK(gl)ASGVQAQMAK_
RBMS1	Ubiquitylation	K207	-2.168	-2.639	_FIK(gl)TPPGVSAPTEPLLCK_
RBMS1	Ubiquitylation	K361	1.134	0.497	_K(gl)IQEAASQGLK_
RBMS1	Phosphorylation	S413	0.717	0.101	_GDHAS(ph)LENEKPGTGDVCSAPAGR_
RFC1	Phosphorylation	S156	-0.050	0.188	_NKPLS(ph)PIK_
RFC1	Phosphorylation	T161	2.131	1.586	_NKPLS(ph)PIKLT(ph)PTSVLDYFGTGSVQR_
RFC1	Phosphorylation	T163		1.551	_NKPLS(ph)PIKLTPT(ph)SVLDYFGTGSVQR_
RFC1	Phosphorylation	S190	2.756	2.241	_ELS(ph)QNTDESGLNDEAIAK_
RFC1	Ubiquitylation	K240		0.991	_TLAMLDEEPKTKK(gl)_
RFC1	Ubiquitylation	K271	0.551		_VK(gl)TAQVSDERK_
RFC1	Phosphorylation	S368	0.431	0.440	_KESVS(ph)PEDSEK_
RFC1	Ubiquitylation	K436	-0.227		_YGGK(gl)VTGNVSK_
RFC1	Ubiquitylation	K498	0.781		_SKYEIAVETEMK(gl)K_
RFC1	Ubiquitylation	K499	0.781		_SKYEIAVETEMK(gl)K_
SAFB	Phosphorylation	S20		0.318	_(ac)AETLSGLGDSGAAGAAALS(ph)SASSETGTRR_
SAFB	Phosphorylation	S24	0.218	0.409	_(ac)AETLSGLGDSGAAGAAALSSASS(ph)ETGTR_
SAFB	Phosphorylation	T188	-0.570	-1.020	_ET(ph)INNLDTSSSDFTILQEIEEPSLEPENEK_
SAFB	Phosphorylation	S227	-0.615	-0.426	_S(ph)EPVKEESSELEQPFAQDTSSVGPDR_
SAFB	Phosphorylation	S234	-0.054	-0.054	_SEPVKEES(ph)SELEQPFAQDTSSVGPDRK_
SAFB	Phosphorylation	S235	0.155	-0.209	_SEPVKEESS(ph)ELEQPFAQDTSSVGPDR_
SAFB	Phosphorylation	S247	-0.662	-0.622	_SEPVKEESSELEQPFAQDTSS(ph)VGPDRK_
SAFB	Phosphorylation	S344	-1.775	-0.465	_TDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPS(ph)PEAR_
SAFB	Phosphorylation	S373		-0.044	_ESS(ph)TSEGADQKMSSPEDDSDTKR_
SAFB	Phosphorylation	S383	0.605	0.950	_ESSTSEGADQKMS(ph)SPEDDSDTKR_
SAFB	Phosphorylation	S384	0.426	0.610	_MSS(ph)PEDDSDTKR_
SAFB	Ubiquitylation	K392	-0.460		_MSSPEDDSDTK(gl)R_
SAFB	Ubiquitylation	K423	0.847		_ATDLK(gl)NLFSK_
SAFB	Ubiquitylation	K428	0.779		_NLFSK(gl)YGK_
SAFB	Ubiquitylation	K436	1.517		_VVGAK(gl)VVTNAR_
SAFB	Ubiquitylation	K475	1.241		_TELHGK(gl)MISVEK_
SAFB	Phosphorylation	S604	0.694	0.453	_SVVS(ph)FDKVK_
SMAD2	Phosphorylation	T8	-0.896	-0.885	_(ac)SSILPFT(ph)PPVVK_
SMAD2	Ubiquitylation	K13	-0.058		_(ac)SSILPFTPPVVK(gl)R_
SMAD3	Ubiquitylation	K13	-0.704		_(ac)SSILPFTPPIVK(gl)R_
SP1	Phosphorylation	S2	0.834	1.114	_(ac)S(ph)DQDHSMDEMTAVVK_
SP1	Phosphorylation	S7	0.586	0.217	_(ac)SDQDHS(ph)MDEMTAVVK_
SP1	Phosphorylation	S56	-0.154		_SSSTGSSSSTGGGGQES(ph)QPSPLALLAATCSR_
SP1	Phosphorylation	S59	-0.217	-0.135	_SSSTGSSSSTGGGGQESQPS(ph)PLALLAATCSR_
STAT1	Phosphorylation	S727	1.377	0.974	_LQTTDNLLPMS(ph)PEEFDEVSR_
STAT5B	Phosphorylation	S194		0.270	_IQAQFGPLAQLS(ph)PQER_
TARDBP	Ubiquitylation	K95	0.123		_KMDETDASSAVK(gl)VK_
TARDBP	Ubiquitylation	K145	0.090		_TGHSK(gl)GFGFVR_
TARDBP	Ubiquitylation	K160	0.720		_FTEYETQVK(gl)VMSQR_
TARDBP	Ubiquitylation	K176	-0.001	0.145	_WCDCK(gl)LPNSK_
TARDBP	Ubiquitylation	K181	-0.479	-0.804	_LPNSK(gl)QSQDEPLR_
TARDBP	Ubiquitylation	K263	0.619		_GISVHISNAEPK(gl)HNSNR_
TDG	Ubiquitylation	K103		0.728	_ITDTFK(gl)VKR_
TDG	Ubiquitylation	K105		1.500	_ITDTFKVK(gl)_
TDG	Ubiquitylation	K201	-0.531	0.797	_TTPGSK(gl)DLSSK(gl)EFR_
TDG	Ubiquitylation	K206	0.334	1.024	_TTPGSK(gl)DLSSK(gl)EFR_
TDG	Ubiquitylation	K218		1.203	_ILVQK(gl)LQK_
TDG	Ubiquitylation	K221		1.524	_LQK(gl)YQPR_
TDG	Ubiquitylation	K246	0.699	1.949	_EVFGVK(gl)VK_
TDG	Ubiquitylation	K285		1.047	_AQDK(gl)VHYYIK_
TDG	Ubiquitylation	K293		1.411	_LK(gl)DLRDQLK_
TDG	Ubiquitylation	K300		0.980	_DQLK(gl)GIER_
USF1	Ubiquitylation	K269	-0.265	0.440	_IIPDCNADNSK(gl)TGASK_
USF1	Phosphorylation	S279	-0.121	0.837	_GGILS(ph)KACDYIR_
USF1	Ubiquitylation	K300	-0.172		_MQETFK(gl)EAER_
USF2	Ubiquitylation	K269	-0.265	0.440	_IIPDCNADNSK(gl)TGASK_
USF2	Phosphorylation	S279	-0.121	0.837	_GGILS(ph)KACDYIR_
USF2	Ubiquitylation	K300	-0.172		_MQETFK(gl)EAER_
XRCC5	Ubiquitylation	K195	-0.495	-0.075	_LGGHGPSFPLK(gl)GITEQQK_
XRCC5	Ubiquitylation	K265	-0.577	0.489	_IAAYK(gl)SILQER_
XRCC5	Ubiquitylation	K282	0.763		_TWTVVDAK(gl)TLKK_
XRCC5	Ubiquitylation	K325	0.022	-0.122	_YGSDIVPFSK(gl)VDEEQMK_
XRCC5	Ubiquitylation	K332	-0.032	0.491	_VDEEQMK(gl)YK_
XRCC5	Ubiquitylation	K347	0.588	1.044	_CFSVLGFCK(gl)SSQVQR_
XRCC5	Ubiquitylation	K481	-1.648	0.087	_TDTLEDLFPTTK(gl)IPNPR_
XRCC5	Ubiquitylation	K532	0.343	-0.001	_SQIPLSK(gl)IK_
XRCC5	Ubiquitylation	K534	-0.146	0.207	_SQIPLSKIK(gl)_
XRCC5	Ubiquitylation	K543	0.666	0.157	_TLFPLIEAK(gl)KK_
XRCC5	Ubiquitylation	K544	0.165	0.157	_TLFPLIEAKK(gl)_
XRCC5	Ubiquitylation	K660	0.644	1.285	_FNNFLK(gl)ALQEK_
XRCC5	Ubiquitylation	K665	0.630	0.990	_ALQEK(gl)VEIK_
XRCC5	Ubiquitylation	K702	0.626	0.332	_EEASGSSVTAEEAK(gl)K_
XRCC5	Ubiquitylation	K703	0.743	0.332	_EEASGSSVTAEEAKK(gl)_
XRCC6	Phosphorylation	S27	0.932	0.873	_TEGDEEAEEEQEENLEAS(ph)GDYK_
XRCC6	Ubiquitylation	K114	-0.534	-0.728	_NIYVLQELDNPGAK(gl)R_
XRCC6	Ubiquitylation	K123		-0.756	_ILELDQFK(gl)GQQGQK_
XRCC6	Ubiquitylation	K129	0.079	-0.683	_ILELDQFKGQQGQK(gl)R_
XRCC6	Ubiquitylation	K182		-1.603	_IMLFTNEDNPHGNDSAK(gl)ASR_
XRCC6	Ubiquitylation	K282	-2.587		_ALK(gl)PPPIK_
XRCC6	Ubiquitylation	K287	-1.436	-2.286	_ALKPPPIK(gl)LYR_
XRCC6	Ubiquitylation	K299	-0.535	-0.792	_ETNEPVKTK(gl)TR_
XRCC6	Ubiquitylation	K317	-0.584	-0.964	_TFNTSTGGLLLPSDTK(gl)R_
XRCC6	Ubiquitylation	K331	-1.666		_QIILEK(gl)EETEELKR_
XRCC6	Ubiquitylation	K338	-1.479	-1.003	_QIILEKEETEELK(gl)R_
XRCC6	Ubiquitylation	K451	-1.713	-1.901	_MPFTEK(gl)IMATPEQVGK_
XRCC6	Phosphorylation	T455	-0.085	0.348	_IMAT(ph)PEQVGK_
XRCC6	Ubiquitylation	K461	0.239	-0.409	_IMATPEQVGK(gl)MK_
XRCC6	Ubiquitylation	K463	-0.609	-0.641	_MK(gl)AIVEK_
XRCC6	Ubiquitylation	K468	-1.302	-0.451	_AIVEK(gl)LR_
XRCC6	Phosphorylation	S475	1.136	0.167	_S(ph)DSFENPVLQQHFR_
XRCC6	Phosphorylation	S477	1.023	0.034	_SDS(ph)FENPVLQQHFR_
XRCC6	Ubiquitylation	K516		-1.089	_VEAMNK(gl)R_
XRCC6	Phosphorylation	S560	0.318	0.378	_VEYS(ph)EEELKTHISK_
XRCC6	Ubiquitylation	K565	0.021	-0.887	_VEYSEEELK(gl)THISK_
XRCC6	Ubiquitylation	K575	0.031	-0.121	_GTLGK(gl)FTVPMLK_
XRCC6	Ubiquitylation	K591	0.474	0.187	_AYGLK(gl)SGLK_
YBX1	Ubiquitylation	K64	5.830	4.056	_VLGTVK(gl)WFNVR_
YBX1	Ubiquitylation	K137	-0.751	0.084	_GAEAANVTGPGGVPVQGSK(gl)YAADR_
YBX1	Phosphorylation	Y162		-0.210	_NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR_
YBX1	Phosphorylation	S165	0.119	0.151	_NYQQNYQNS(ph)ESGEK_
YBX1	Ubiquitylation	K170	-0.297	0.298	_NYQQNYQNSESGEK(gl)NEGSESAPEGQAQQR_
YBX1	Phosphorylation	S174	0.041	0.228	_NEGS(ph)ESAPEGQAQQR_
YBX1	Phosphorylation	S176	0.061	0.075	_NEGSES(ph)APEGQAQQR_
YBX1	Phosphorylation	S209	0.658	-0.148	_RPQYS(ph)NPPVQGEVM(ox)EGADNQGAGEQGRPVR_
YBX2	Phosphorylation	S34	-1.234	-1.488	_S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK_
YBX2	Phosphorylation	S79		-2.262	_SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGS(ph)EDAEKK_
YBX2	Ubiquitylation	K90	3.724	2.851	_VLATK(gl)VLGTVK_
YBX2	Ubiquitylation	K96	5.830	4.056	_VLGTVK(gl)WFNVR_
YBX2	Ubiquitylation	K113	1.472	1.136	_NDTK(gl)EDVFVHQTAIK_
YBX2	Ubiquitylation	K124	-0.184	0.337	_NDTKEDVFVHQTAIK(gl)K(gl)NNPR_
YBX2	Ubiquitylation	K125	-0.123	0.220	_NDTKEDVFVHQTAIK(gl)K(gl)NNPR_
YBX2	Phosphorylation	S203	-0.609	-0.604	_NYAGEEEEEGSGS(ph)SEGFDPPATDR_
YBX2	Ubiquitylation	K268	-0.103	-0.702	_IQAGEIGEMK(gl)DGVPEGAQLQGPVHR_
YBX2	Phosphorylation	S324	-1.327	-0.720	_PAPAVGEAEDKENQQATSGPNQPS(ph)VR_
ZEB1	Ubiquitylation	K77	0.237		_FTSLK(gl)EHIK_
ZEB1	Ubiquitylation	K398	-0.697	0.131	_SEK(gl)LPEDLTVK_
ZEB1	Phosphorylation	S713	-0.669	-0.753	_NNDQPQSANANEPQDSTVNLQS(ph)PLK_
ZEB1	Phosphorylation	S1025		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZEB1	Phosphorylation	T1026		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZNF148	Phosphorylation	T305	-0.023		_GGLLTSEEDSGFST(ph)SPKDNSLPK_
ZNF148	Phosphorylation	S306	2.082		_GGLLTSEEDSGFSTS(ph)PK_
ZNF148	Phosphorylation	S311		0.900	_GGLLTSEEDSGFSTSPKDNS(ph)LPK_
ZNF148	Phosphorylation	S665	2.220		_SGMNS(ph)PLR_
ZNF638	Phosphorylation	S552	0.094	-0.495	_NPFRGS(ph)PK_
ZNF638	Phosphorylation	S1100	-0.484	-0.361	_IDLPEVQIEHDPELEKES(ph)PGLK_
ZNF638	Phosphorylation	S1401	-0.156	-0.335	_AVIVSS(ph)PK_