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Query: YBX2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
YBX2 2 10.199 0.320 -0.460 -0.197 -0.190 -1.344 -0.617
YBX2 2 10.199 0.320 -0.460 0.674 0.402 -1.244 -0.405

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
YBX2 Ubiquitylation K96 5.830 4.056 _VLGTVK(gl)WFNVR_
YBX2 Ubiquitylation K64 5.830 4.056 _VLGTVK(gl)WFNVR_
YBX2 Ubiquitylation K90 3.724 2.851 _VLATK(gl)VLGTVK_
YBX2 Ubiquitylation K113 1.472 1.136 _NDTK(gl)EDVFVHQTAIK_
YBX2 Ubiquitylation K124 -0.184 0.337 _NDTKEDVFVHQTAIK(gl)K(gl)NNPR_
YBX2 Ubiquitylation K170 -0.297 0.298 _NYQQNYQNSESGEK(gl)NEGSESAPEGQAQQR_
YBX2 Phosphorylation S174 0.041 0.228 _NEGS(ph)ESAPEGQAQQR_
YBX2 Ubiquitylation K125 -0.123 0.220 _NDTKEDVFVHQTAIK(gl)K(gl)NNPR_
YBX2 Phosphorylation S165 0.119 0.151 _NYQQNYQNS(ph)ESGEK_
YBX2 Ubiquitylation K137 -0.751 0.084 _GAEAANVTGPGGVPVQGSK(gl)YAADR_
YBX2 Phosphorylation S176 0.061 0.075 _NEGSES(ph)APEGQAQQR_
YBX2 Phosphorylation S209 0.658 -0.148 _RPQYS(ph)NPPVQGEVM(ox)EGADNQGAGEQGRPVR_
YBX2 Phosphorylation Y162 -0.210 _NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR_
YBX2 Phosphorylation S203 -0.609 -0.604 _NYAGEEEEEGSGS(ph)SEGFDPPATDR_
YBX2 Ubiquitylation K268 -0.103 -0.702 _IQAGEIGEMK(gl)DGVPEGAQLQGPVHR_
YBX2 Phosphorylation S324 -1.327 -0.720 _PAPAVGEAEDKENQQATSGPNQPS(ph)VR_
YBX2 Phosphorylation S34 -1.234 -1.488 _S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK_
YBX2 Phosphorylation S79 -2.262 _SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGS(ph)EDAEKK_

Background Information for YBX2:


Pubmed-YBX2 »
Uniprot-YBX2 »
Biogrid-YBX2 »
ProteomicsDB-YBX2 »

Tumorportal-YBX2 »
COSMIC-YBX2 »
GenomeRNAi-YBX2 »
Genecards-YBX2


Protein-protein Interactions for YBX2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ELAVL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait H2AFX Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HIST1H1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HIST1H1E Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HIST1H1T Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MKI67IP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPAN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRDM5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZCRB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in YBX2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NA-bd_OB-fold IPR012340 4.37
Category members CSP_DNA-bd IPR002059 0.04
Category members Cold_shock_prot IPR011129 0.04


Protein complexes (CORUM database) featuring YBX2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring YBX2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0017148 negative regulation of translation Database 0.34
Category members GO Category GO:0003730 mRNA 3'-UTR binding Database 0.24
Category members GO Category GO:0045182 translation regulator activity Database 0.18
Category members GO Category GO:0048477 oogenesis Database 0.11
Category members GO Category GO:0005844 polysome Database 0.09
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007283 spermatogenesis Database 0
Category members GO Category GO:0007286 spermatid development Database 0
Category members GO Category GO:0008289 lipid binding Database 0
Category members GO Category GO:0043021 ribonucleoprotein complex binding Database 0
Category members GO Category GO:0048255 mRNA stabilization Database 0
Category members GO Category GO:0048599 oocyte development Database 0
Category members GO Category GO:0051100 negative regulation of binding Database 0


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