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Query: CCDC47

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CCDC47 0 0.571 0.850 -0.930 0.233 0.184 0.318

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CCDC47 Ubiquitylation K351 -2.212 -0.647 _IMQEEGQPLK(gl)LPDTK_
CCDC47 Ubiquitylation K356 -0.934 _IMQEEGQPLKLPDTK(gl)R_
CCDC47 Ubiquitylation K419 0.483 _VEENFLK(gl)LTHVQR_

Background Information for CCDC47:


Pubmed-CCDC47 »
Uniprot-CCDC47 »
Biogrid-CCDC47 »
ProteomicsDB-CCDC47 »

Tumorportal-CCDC47 »
COSMIC-CCDC47 »
GenomeRNAi-CCDC47 »
Genecards-CCDC47


Protein-protein Interactions for CCDC47
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP7A Cat. description Hein, Mann, Cell 2015
Category members IP bait CCT4 Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TNPO1 Cat. description Hein, Mann, Cell 2015


Protein Domains in CCDC47
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring CCDC47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CCDC47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0005509 calcium ion binding Database 0.11
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0006983 ER overload response Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0009790 embryo development Database 0
Category members GO Category GO:0009791 post-embryonic development Database 0
Category members GO Category GO:0055074 calcium ion homeostasis Database 0


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