RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PI4K2A	2	0.840	-0.110				0.942	0.288
AMOTL1	2	-1.540	3.320	0.614			0.467	0.043
AMOTL1	2	-1.540	3.320
SPAST	1	-1.590	2.900
KIF1B	1	-1.430	2.950
KIF1B	1	-1.430	2.950
RAB7A	1	1.540	-0.590	0.299	1.971	-0.775	0.288	-0.293
ITCH	1	1.000	-0.610	-0.346			0.023	0.613
PSMC5	1	0.000	-0.100
PSMC5	1	0.000	-0.100	-0.084		0.014	0.198	-0.612
EEA1	1	1.570	-0.620	1.098			0.020	0.177
FNDC3A	1	0.480	-0.460				-0.044	0.161
CLCN7	1	0.900	-0.600				0.461	-0.162
CCDC88A	1	-0.320	0.670	0.250
CCDC88A	1	-0.160	-0.260	0.250
ARFGEF2	1	-0.840	1.310	2.230
ARRB2	1	2.000	-1.160	-0.340	0.096	0.051		-1.604
KIAA0319L	1	1.520	-0.500				0.649	2.420
ARAP1	1	-1.730	2.580				-0.455	-0.098
ATG9A	1	-0.430	0.730					1.551
GABARAPL2	0	1.830	-0.990
VAMP3	0	-0.800	0.690				0.418
VAMP3	0	-0.800	0.690
LRP6	0	0.210	0.050
PSEN1	0	0.930	-1.110
CADPS2	0	0.840	-0.140
SNAP23	0	0.830	-0.330				0.697	0.779
NRP1	0	0.880	-0.670				0.909	0.353
CHMP4A	0	-0.580	0.780
TM9SF1	0	-0.420	0.130
MIB1	0	0.710	-1.060					0.258
RP2	0	-0.730	0.030					-0.477
SPG11	0	1.830	-1.010
ARRDC2	0	0.720	0.370
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
MPDZ	0	-0.900	0.940				0.139	-0.579
AMBRA1	0	1.670	-0.450	-1.226				-2.109
PIKFYVE	0	-0.230	0.410
WLS	0	-0.540	1.290
APOA1	0	0.850	-0.420				-3.959
CXCR4	0	0.640	-0.440
AMOT	0	1.330	-0.510	0.614			0.467	0.043
AMOT	0	1.330	-0.510
KLC1	0	-0.330	0.080	1.524
KLC1	0	-0.330	0.080
PRDX5	0	0.930	-0.480		-1.143			1.450
RAB25	0	0.260	-0.610	0.324			0.697	0.458
RAC1	0	-0.580	1.580	0.486			-0.364	-0.568
ARRB1	0	0.960	-0.620
ERBB2	0	-1.310	1.360
SOD1	0	1.450	-1.250
APP	0	0.100	-0.260					0.285
RAB10	0	-0.280	-0.200		1.641	-1.484	0.560	0.491
TBC1D7	0	0.000	1.060
USP6NL	0	1.020	-0.820
BICD1	0	0.240	-0.570
ADAMTS1	0	-0.440	0.580					-0.624
ATP6V1C1	0
RUSC1	0	0.280	-0.220
SQSTM1	0	-0.860	1.770	-2.165			-2.063	-1.741
SQSTM1	0	-0.440	0.530	-2.165			-2.063	-1.741
FYCO1	0	0.970	-1.080				-1.408	0.596
ATP7A	0	-0.210	0.370
RAB8B	0	-0.070	0.130	-0.051			0.529	0.549
RAB8B	0	-0.070	0.130		1.641	-1.484	0.560	0.491
RAB8B	0	-0.070	0.130				-0.216
GABARAP	0	-1.090	2.300
RAB6A	0	-1.080	1.980				0.752	0.721
RAB6A	0	-1.080	1.980		1.078	-1.682
LAMP1	0	-0.830	0.960				0.121	0.196
BICD2	0	1.310	-1.070
NBR1	0	0.470	-0.040	-2.408
PTPN1	0	-0.150	0.310	1.066	0.459	0.251	0.322	0.379
ENTPD4	0	-0.780	0.800
SPRED2	0	0.990	-1.050
PDCD6	0	-1.230	2.040	-0.156	-0.537	0.910	-0.243	-0.371

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AMBRA1	Ubiquitylation	K175	-0.373	0.447	_REPFAVVK(gl)TASEMER_
AMOT	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOT	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOT	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOT	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOT	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
AMOTL1	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOTL1	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOTL1	Ubiquitylation	K174	-0.710		_QEPQGQEHQVDNTVMEK(gl)QVR_
AMOTL1	Ubiquitylation	K227		0.218	_GQQQQQQQQGAVGHGYYMAGGTSQK(gl)SR_
AMOTL1	Ubiquitylation	K251	-0.083		_ANSGQAHKDEALK(gl)ELK_
AMOTL1	Phosphorylation	S269		0.526	_IMQLS(ph)LER_
AMOTL1	Ubiquitylation	K302	-1.446	-1.374	_VGGGPSPAQPAGK(gl)VLDPR_
AMOTL1	Ubiquitylation	K316	-0.341		_GPPPEYPFK(gl)TK_
AMOTL1	Ubiquitylation	K318	0.088	0.953	_TK(gl)QMMSPVSK_
AMOTL1	Ubiquitylation	K474	1.416	1.608	_FEK(gl)ELQR_
AMOTL1	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOTL1	Ubiquitylation	K625	1.158	1.703	_LQQALTQLQSACEK(gl)R_
AMOTL1	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOTL1	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
AMOTL1	Phosphorylation	S720	0.743	0.380	_DTTIINHS(ph)R_
APP	Ubiquitylation	K751	-1.778	-1.280	_HLSK(gl)M(ox)QQNGYENPTYK_
ARAP1	Ubiquitylation	K586		0.227	_GLGAGVSK(gl)VR_
ARFGEF2	Phosphorylation	S214	0.250		_ELEKPIQS(ph)KPQSPVIQAAAVS(ph)PK_
ARFGEF2	Phosphorylation	S218	-0.081	0.177	_ELEKPIQSKPQS(ph)PVIQAAAVS(ph)PK_
ARFGEF2	Phosphorylation	S227	-1.086	-0.941	_ELEKPIQSKPQS(ph)PVIQAAAVS(ph)PK_
ARFGEF2	Phosphorylation	S276	0.922	0.963	_GS(ph)SLSGTDDGAQEVVK_
ARFGEF2	Phosphorylation	S277	0.851	0.904	_GSS(ph)LSGTDDGAQEVVK_
ARFGEF2	Phosphorylation	S1528	-0.424	0.473	_GQSQLS(ph)NPTDDSWK_
ARRB1	Phosphorylation	S412	0.138	0.253	_GMKDDKEEEEDGTGS(ph)PQLNNR_
ARRB2	Ubiquitylation	K199	-1.933		_VQFAPEK(gl)PGPQPSAETTR_
ARRDC2	Ubiquitylation	K189	-2.280		_GLVSLSAK(gl)IDR_
ATG9A	Phosphorylation	S18	0.284	0.175	_LEASYSDS(ph)PPGEEDLLVHVAEGSK_
ATG9A	Phosphorylation	S654	-0.181		_S(ph)FSPLQPGQAPTGR_
ATG9A	Phosphorylation	S656	-0.724	-0.246	_SFS(ph)PLQPGQAPTGR_
ATG9A	Phosphorylation	S828	-0.863	-0.673	_HPEPVPEEGS(ph)EDELPPQVHKV_
ATP6V1C1	Ubiquitylation	K28	-0.393		_LHAATSK(gl)NNNLAVTSK_
ATP7A	Ubiquitylation	K333	0.029		_K(gl)AIEAVSPGLYR_
BICD1	Phosphorylation	S546	-0.356		_S(ph)GSLKGPDDPR_
BICD1	Phosphorylation	S548	-0.359	0.539	_SGS(ph)LKGPDDPR_
BICD1	Phosphorylation	S860	0.095	0.555	_QFS(ph)PSLCDQSR_
BICD2	Phosphorylation	S329		0.294	_KEGLAPPS(ph)PSLVSDLLSELNISEIQK_
BICD2	Phosphorylation	S582	-0.253	-0.115	_S(ph)PILLPK_
CADPS2	Phosphorylation	S58	-0.487	-0.351	_SVS(ph)PSPSVLSEGR_
CAV1	Ubiquitylation	K5	0.591	0.963	_(ac)SGGK(gl)YVDSEGHLYTVPIR_
CAV1	Phosphorylation	S6	0.836	0.688	_(ac)ADELS(ph)EKQVYDAHTK_
CAV1	Ubiquitylation	K8	0.244	0.734	_(ac)ADELSEK(gl)QVYDAHTK_
CAV1	Ubiquitylation	K26	0.724	0.894	_EQGNIYK(gl)PNNK_
CAV1	Ubiquitylation	K30	-0.008	0.317	_EQGNIYKPNNK(gl)AMADELSEK_
CAV1	Ubiquitylation	K39	0.690	1.170	_AMADELSEK(gl)QVYDAHTK_
CAV1	Phosphorylation	S76	0.607	0.527	_AMADELS(ph)EK_
CAV1	Ubiquitylation	K176		-0.259	_INLQK(gl)EI_
CCDC88A	Phosphorylation	S1387		-0.568	_FYDPS(ph)PPR_
CCDC88A	Phosphorylation	S1587		2.636	_VHASRPAS(ph)LDSGR_
CCDC88A	Phosphorylation	T1673	0.950	0.959	_T(ph)GSPGSEVVTLQQFLEESNK_
CCDC88A	Phosphorylation	S1675	0.884	0.947	_TGS(ph)PGSEVVTLQQFLEESNK_
CCDC88A	Phosphorylation	S1700	0.947		_S(ph)SSQENLLDEVM(ox)K_
CCDC88A	Phosphorylation	S1702	0.387	1.065	_SSS(ph)QENLLDEVMK_
CCDC88A	Phosphorylation	S1820		0.228	_RTS(ph)IHDFLTK_
CHMP4A	Ubiquitylation	K115	-0.705		_TMELAAQSMKK(gl)_
CLCN7	Ubiquitylation	K6	1.497		_(ac)ANVSK(gl)K(gl)VSWSGR_
CLCN7	Ubiquitylation	K7	1.662		_K(gl)VSWSGR_
CLCN7	Phosphorylation	S60	-0.795	-0.945	_VGHMS(ph)SVELDDELLDPDMDPPHPFPK_
CLCN7	Phosphorylation	S61	-0.795	-0.997	_VGHMSS(ph)VELDDELLDPDMDPPHPFPK_
CXCR4	Phosphorylation	S319	0.861	-0.615	_TSAQHALTS(ph)VSR_
CXCR4	Ubiquitylation	K327	0.978	0.329	_GSSLK(gl)ILSK_
EEA1	Ubiquitylation	K100	0.234	1.002	_QEVQDLQASLK(gl)EEK_
EEA1	Ubiquitylation	K103	-0.344		_QEVQDLQASLKEEK(gl)_
EEA1	Phosphorylation	S354	1.047	1.214	_LS(ph)ASETSLHR_
EEA1	Ubiquitylation	K1029		1.686	_SQETFK(gl)QLQSDFYGR_
EEA1	Ubiquitylation	K1162	0.355		_EITNLK(gl)DAK_
EEA1	Ubiquitylation	K1178	-1.915		_LELQGK(gl)ADSLK_
EEA1	Ubiquitylation	K1225	-1.291		_LHSEIKEK(gl)_
EEA1	Ubiquitylation	K1312	-0.851		_LQTK(gl)VLELQR_
ENTPD4	Ubiquitylation	K348		-0.267	_IFANTIQK(gl)NR_
ENTPD4	Ubiquitylation	K487		-0.988	_LK(gl)YQCFK_
ERBB2	Ubiquitylation	K200		-2.073	_ACHPCSPMCK(gl)GSR_
ERBB2	Ubiquitylation	K369		-0.742	_AVTSANIQEFAGCKK(gl)_
ERBB2	Ubiquitylation	K747	-0.505	-0.019	_GIWIPDGENVK(gl)IPVAIK_
ERBB2	Ubiquitylation	K854	-0.859		_NVLVK(gl)SPNHVK_
ERBB2	Phosphorylation	S1054	-0.476	-0.706	_S(ph)GGGDLTLGLEPSEEEAPR_
FNDC3A	Phosphorylation	S203	1.581	-0.157	_MSS(ph)PPSSPQK_
FYCO1	Ubiquitylation	K416	0.606	0.803	_TK(gl)VEEVNR_
GABARAP	Ubiquitylation	K13	-0.569		_FVYKEEHPFEK(gl)R_
GABARAPL2	Ubiquitylation	K20		-0.292	_CVESAK(gl)IR_
GABARAPL2	Ubiquitylation	K24	-0.237	-0.668	_AK(gl)YPDRVPVIVEK_
ITCH	Ubiquitylation	K66	-0.890		_WK(gl)QPLTVIVTPVSK_
ITCH	Ubiquitylation	K350	0.049	0.396	_VYYVDHVEK(gl)R_
ITCH	Ubiquitylation	K446	-1.514	-1.539	_EFDPLGPLPPGWEK(gl)R_
ITCH	Ubiquitylation	K478	-1.265		_SQGQLNEK(gl)PLPEGWEMR_
ITCH	Ubiquitylation	K513	-0.564	1.593	_TGK(gl)SALDNGPQIAYVR_
ITCH	Ubiquitylation	K861	-0.810	0.596	_VGK(gl)ENWLPR_
KIAA0319L	Phosphorylation	S978	0.209	1.303	_ILDATDQES(ph)LELKPTSR_
KIAA0319L	Ubiquitylation	K982	-1.177	0.267	_ILDATDQESLELK(gl)PTSR_
KIF1B	Ubiquitylation	K716		-1.295	_LQALQK(gl)QVETR_
KIF1B	Ubiquitylation	K999	-2.236	-0.546	_VAIVSEK(gl)GEVR_
KIF1B	Phosphorylation	S1043	0.427	0.296	_SGLS(ph)LEELR_
KIF1B	Ubiquitylation	K1089	-0.939	-1.059	_INDLDLK(gl)SSTLLDGK_
KIF1B	Phosphorylation	S1644	-1.348		_AS(ph)SPCPEFEQFQIVPAVETPYLAR_
KIF1B	Phosphorylation	S1645	-1.266	-1.231	_ASS(ph)PCPEFEQFQIVPAVETPYLAR_
KLC1	Phosphorylation	S66	-0.049	0.154	_VDS(ph)PTVTTTLK_
KLC1	Phosphorylation	S152	0.911	0.956	_S(ph)RESLNVDVVK_
KLC1	Phosphorylation	S155	0.730	0.916	_SRES(ph)LNVDVVK_
KLC1	Phosphorylation	S230	0.584	0.849	_RAS(ph)SLNVLNVGGK_
KLC1	Phosphorylation	S231	0.511	0.647	_ASS(ph)LNVLNVGGK_
LRP6	Ubiquitylation	K1443		-0.221	_GK(gl)SMISSLSIMGGSSGPPYDR_
MIB1	Ubiquitylation	K28	-0.465	-1.379	_WGK(gl)QDGGEGHVGTVR_
MIB1	Ubiquitylation	K222	-0.025	-0.938	_CVQDAK(gl)GGSFYR_
MIB1	Ubiquitylation	K420	-1.942	-2.115	_LSQLLK(gl)K_
MIB1	Ubiquitylation	K421		-1.850	_LSQLLKK(gl)_
MIB1	Ubiquitylation	K485	-1.697		_LLLK(gl)QNVDVEAEDKDGDR_
MIB1	Ubiquitylation	K726	-2.735	-2.946	_QLQDMQDVGK(gl)VDAAWEPSK_
MIB1	Ubiquitylation	K749		-2.124	_NTLIMGLGTQGAEK(gl)K_
MIB1	Ubiquitylation	K750	-2.385	-2.133	_NTLIMGLGTQGAEKK(gl)_
MIB1	Ubiquitylation	K787	-3.370		_KGQSPLDLCPDPNLCK(gl)ALAK_
MIB1	Ubiquitylation	K791	-3.063	-2.513	_GQSPLDLCPDPNLCKALAK(gl)_
MIB1	Ubiquitylation	K796		-3.011	_EK(gl)VSGQVGSR_
MIB1	Ubiquitylation	K854		-0.986	_CLICK(gl)EQVQSR_
MIB1	Ubiquitylation	K872	-2.513	-2.977	_TKIEECVVCSDK(gl)K_
MIB1	Ubiquitylation	K873	-2.513		_IEECVVCSDK(gl)K_
MPDZ	Phosphorylation	S230	-0.025	0.367	_GSLPQLVS(ph)PIVSR_
MPDZ	Phosphorylation	S352	-0.544	-0.047	_TAPTALGITLS(ph)SSPTSTPELR_
MPDZ	Phosphorylation	S354	-0.160	-0.102	_TAPTALGITLSSS(ph)PTSTPELR_
MPDZ	Phosphorylation	S483	1.136	1.210	_DADLS(ph)PVNASIIK_
MPDZ	Phosphorylation	S1609	0.051	-0.593	_KNSSQSLM(ox)VPQSGS(ph)PEPESIR_
MPDZ	Ubiquitylation	K1701	0.095		_K(gl)ATHDEAINVLR_
MPDZ	Ubiquitylation	K2036	-0.005		_TVFAK(gl)GAASEDGR_
NBR1	Ubiquitylation	K464	-0.807	-2.087	_LSHK(gl)GQQFGPR_
NBR1	Ubiquitylation	K515	-0.852		_TDDLTCQQEETFLLAK(gl)EER_
NBR1	Ubiquitylation	K539	-0.515	-0.635	_QLGEVTEQTEGTAACIPQKAK(gl)_
NBR1	Ubiquitylation	K627	-0.779	-1.425	_ALPDSMVSVK(gl)R_
NBR1	Ubiquitylation	K767	-1.436		_GAEGK(gl)PGVEAGQEPAEAGER_
PDCD6	Ubiquitylation	K112	0.803	-0.435	_TYDRDNSGMIDK(gl)NELK_
PI4K2A	Phosphorylation	S5		1.252	_(ac)MDETS(ph)PLVSPER_
PI4K2A	Phosphorylation	S47	-0.349	-0.395	_VAAAAGSGPS(ph)PPGSPGHDR_
PI4K2A	Phosphorylation	S51	0.488	-0.461	_VAAAAGSGPS(ph)PPGS(ph)PGHDR_
PI4K2A	Ubiquitylation	K141	0.012	0.109	_IYQGSSGSYFVK(gl)DPQGR_
PI4K2A	Ubiquitylation	K240	-0.760	0.024	_LALEK(gl)VPK_
PI4K2A	Ubiquitylation	K243	0.312	0.617	_VPK(gl)VGQR_
PI4K2A	Ubiquitylation	K336	-0.688	-0.119	_DTDWVVVK(gl)EPVIK_
PI4K2A	Phosphorylation	S460	1.154		_S(ph)SSESYTQSFQSR_
PI4K2A	Phosphorylation	S462	1.525	1.524	_SSS(ph)ESYTQSFQSR_
PIKFYVE	Phosphorylation	S307	0.463	0.429	_SAS(ph)ITNLSLDR_
PIKFYVE	Phosphorylation	S1714		-0.557	_SSS(ph)PIRLPEMSGGQTNR_
PIKFYVE	Phosphorylation	S1754	-0.097	0.057	_GTAGKS(ph)PDLSSQK_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
PSMC5	Ubiquitylation	K7	0.167		_(ac)MELEEGK(gl)AGSGLR_
PSMC5	Ubiquitylation	K15	-0.747	0.003	_(ac)ALDGPEQMELEEGK(gl)AGSGLR_
PSMC5	Ubiquitylation	K55	-0.538	-0.039	_NELNAK(gl)VR_
PSMC5	Ubiquitylation	K88	-0.430	-0.397	_VLVK(gl)VHPEGK_
PSMC5	Ubiquitylation	K101	-1.062		_FVVDVDK(gl)NIDINDVTPNCR_
PSMC5	Ubiquitylation	K130	-0.243		_ILPNK(gl)VDPLVSLMMVEK_
PSMC5	Ubiquitylation	K330		2.949	_LDILK(gl)IHSR_
PSMC5	Ubiquitylation	K346	0.008		_K(gl)IAELMPGASGAEVK_
PSMC5	Ubiquitylation	K397	0.415	0.779	_DSEK(gl)NMSIK_
PSMC5	Ubiquitylation	K402	0.363		_DSEK(gl)NMSIKK_
PTPN1	Phosphorylation	S352		0.032	_GS(ph)PLNAAPYGIESMSQDTEVR_
PTPN1	Phosphorylation	S365	-0.247	0.956	_GSPLNAAPYGIESMS(ph)QDTEVR_
PTPN1	Phosphorylation	S378	1.462	1.262	_VVGGS(ph)LR_
RAB10	Ubiquitylation	K163		0.199	_LLLGNK(gl)CDMEAK_
RAB10	Ubiquitylation	K174	-0.188		_VQK(gl)EQADKLAR_
RAB10	Ubiquitylation	K213	-0.059	0.420	_DILLK(gl)SGGR_
RAB6A	Phosphorylation	S2	-0.159	-0.138	_(ac)S(ph)TGGDFGNPLRK_
RAB6A	Phosphorylation	T3	-0.614	-0.138	_(ac)ST(ph)GGDFGNPLR_
RAB6A	Ubiquitylation	K144	0.298	0.546	_EEAEK(gl)LSADCGMK_
RAB6A	Ubiquitylation	K180	-0.955		_DIYELIK(gl)K_
RAB7A	Ubiquitylation	K32	0.922	1.260	_K(gl)FSNQYK_
RAB7A	Ubiquitylation	K38	0.713	1.294	_FSNQYK(gl)ATIGADFLTK_
RAB7A	Ubiquitylation	K146		-0.718	_AQAWCYSK(gl)NNIPYFETSAK_
RAB8B	Ubiquitylation	K102	-0.105		_SFENISK(gl)WLR_
RAB8B	Ubiquitylation	K163		0.199	_LLLGNK(gl)CDMEAK_
RAB8B	Ubiquitylation	K174	-0.188		_VQK(gl)EQADKLAR_
RAB8B	Ubiquitylation	K213	-0.059	0.420	_DILLK(gl)SGGR_
RAC1	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RAC1	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RAC1	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RAC1	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RAC1	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RAC1	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RAC1	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RAC1	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RP2	Ubiquitylation	K273	0.275	0.425	_EVSMK(gl)AEDAQR_
RUSC1	Ubiquitylation	K511		-0.990	_NLVQK(gl)AQLGDSR_
RUSC1	Ubiquitylation	K803		-1.519	_LFGVPGGPAENENGALK(gl)SR_
SNAP23	Phosphorylation	S5	1.129	1.241	_(ac)M(ox)DNLS(ph)SEEIQQR_
SNAP23	Phosphorylation	S20	-0.626	0.740	_AHQITDES(ph)LESTRR_
SNAP23	Phosphorylation	S34		1.443	_ILGLAIES(ph)QDAGIK_
SNAP23	Ubiquitylation	K49	1.298	0.629	_TITMLDEQK(gl)EQLNR_
SNAP23	Ubiquitylation	K64	0.545		_IEEGLDQINK(gl)DMR_
SNAP23	Ubiquitylation	K71		0.995	_ETEK(gl)TLTELNK_
SNAP23	Ubiquitylation	K97	0.493	0.829	_NFESGK(gl)AYK_
SNAP23	Ubiquitylation	K100	0.095		_AYK(gl)TTWGDGGENSPCNVVSK_
SNAP23	Phosphorylation	S110	0.504	0.683	_TTWGDGGENS(ph)PCNVVSK_
SNAP23	Ubiquitylation	K185	-0.363		_DMALNIGNEIDAQNPQIK(gl)R_
SOD1	Ubiquitylation	K4	-0.329		_(ac)ATK(gl)AVCVLK_
SOD1	Ubiquitylation	K10	0.211	0.582	_AVCVLK(gl)GDGPVQGIINFEQK_
SOD1	Ubiquitylation	K24	-0.435	-0.086	_GDGPVQGIINFEQK(gl)ESNGPVK_
SOD1	Ubiquitylation	K31	-0.109	0.332	_ESNGPVK(gl)VWGSIK_
SOD1	Phosphorylation	S99		0.405	_HVGDLGNVTADKDGVADVS(ph)IEDSVISLSGDHCIIGR_
SOD1	Ubiquitylation	K123	0.352	0.004	_TLVVHEK(gl)ADDLGK_
SOD1	Ubiquitylation	K129	0.143		_ADDLGK(gl)GGNEESTK_
SOD1	Ubiquitylation	K137	0.464	0.934	_ADDLGKGGNEESTK(gl)TGNAGSR_
SPAST	Phosphorylation	S268		0.172	_APS(ph)YSGLSMVSGVK_
SPG11	Ubiquitylation	K353		-1.074	_AQLSSLNETIKNSK(gl)_
SPG11	Ubiquitylation	K552		-1.385	_SK(gl)ENLFNPSSK_
SPG11	Ubiquitylation	K981		-0.707	_IGGVIQDTLPVQNYK(gl)TK_
SPG11	Ubiquitylation	K1300		-0.516	_ESVAEK(gl)LSK_
SPG11	Ubiquitylation	K1724		-1.234	_HIEQWSLK(gl)QAR_
SPG11	Ubiquitylation	K2208		0.052	_TALLDYIK(gl)R_
SPRED2	Ubiquitylation	K254	-0.999		_GK(gl)YPDPSEDADSSYVR_
SQSTM1	Ubiquitylation	K13	0.150	0.302	_AYLLGK(gl)EDAAR_
SQSTM1	Phosphorylation	S28		-0.721	_RFSFCCS(ph)PEPEAEAEAAAGPGPCER_
SQSTM1	Ubiquitylation	K141	-0.915		_YK(gl)CSVCPDYDLCSVCEGK_
SQSTM1	Ubiquitylation	K157	-0.852	-0.677	_CSVCPDYDLCSVCEGK(gl)GLHR_
SQSTM1	Phosphorylation	T269	-0.681	-0.421	_LT(ph)PVS(ph)PESSSTEEK_
SQSTM1	Phosphorylation	S272	0.171	0.044	_LTPVS(ph)PESSSTEEK_
SQSTM1	Phosphorylation	S332		-0.007	_IALESEGRPEEQMESDNCS(ph)GGDDDWTHLSSK_
SQSTM1	Ubiquitylation	K420	-1.122	-0.061	_LLQTK(gl)NYDIGAALDTIQYSK_
SQSTM1	Ubiquitylation	K435	-1.352	-0.780	_NYDIGAALDTIQYSK(gl)HPPPL_
TBC1D7	Ubiquitylation	K118		-0.101	_MYQLESGK(gl)LPR_
TBC1D7	Ubiquitylation	K165		0.026	_FVNQLNTK(gl)YR_
TM9SF1	Ubiquitylation	K115	-0.705		_TMELAAQSMKK(gl)_
USP6NL	Ubiquitylation	K10	0.472	-0.742	_(ac)MNSDQDVALK(gl)LAQER_
USP6NL	Phosphorylation	S396	-0.213	-0.319	_SVGRPS(ph)PLASGR_
USP6NL	Phosphorylation	S714	-0.115	0.036	_IEVLPVDTGAGGYSGNS(ph)GSPK_
USP6NL	Phosphorylation	S716	0.006	-0.090	_IEVLPVDTGAGGYSGNSGS(ph)PK_
VAMP3	Phosphorylation	T9	0.318	-0.040	_(ac)STGPTAAT(ph)GSNR_
VAMP3	Phosphorylation	S11	0.474	0.952	_(ac)STGPTAATGS(ph)NR_
VAMP3	Ubiquitylation	K54	0.408	0.792	_VNVDK(gl)VLER_
VAMP3	Phosphorylation	S58	-0.407	0.612	_ADALQAGAS(ph)QFETSAAK_
VAMP3	Ubiquitylation	K61	0.558	0.387	_VLERDQK(gl)LSELDDR_
VAMP3	Phosphorylation	S63		0.374	_ADALQAGASQFETS(ph)AAK_
WLS	Ubiquitylation	K13		0.869	_AGAIIENMSTKK(gl)_
WLS	Ubiquitylation	K168		0.058	_CTFTSPK(gl)TPEHEGR_
WLS	Ubiquitylation	K206		-0.013	_LPVNEK(gl)K_
WLS	Ubiquitylation	K207	-2.023		_LPVNEKK(gl)_
WLS	Ubiquitylation	K217	-1.452	0.710	_INVGIGEIK(gl)DIR_
WLS	Ubiquitylation	K410		0.878	_NISGK(gl)QSSLPAMSK_
WLS	Ubiquitylation	K419	-1.101	0.564	_QSSLPAMSK(gl)VR_