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Query: GABARAP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GABARAP 0 1.731 -1.090 2.300

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GABARAP Ubiquitylation K13 -0.569 _FVYKEEHPFEK(gl)R_

Background Information for GABARAP:


Pubmed-GABARAP »
Uniprot-GABARAP »
Biogrid-GABARAP »
ProteomicsDB-GABARAP »

Tumorportal-GABARAP »
COSMIC-GABARAP »
GenomeRNAi-GABARAP »
Genecards-GABARAP


Protein-protein Interactions for GABARAP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATG3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STBD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TBC1D25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TGDS Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GABARAP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members Atg8_like IPR004241 0
Category members Atg12 IPR007242 0


Protein complexes (CORUM database) featuring GABARAP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GABARAP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0015629 actin cytoskeleton Database 2.22
Category members GO Category GO:0005874 microtubule Database 1.21
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0008017 microtubule binding Database 0.79
Category members GO Category GO:0000226 microtubule cytoskeleton organization Database 0.5
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0006605 protein targeting Database 0.29
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0007268 synaptic transmission Database 0.23
Category members GO Category GO:0048487 beta-tubulin binding Database 0.1
Category members GO Category GO:0005790 smooth endoplasmic reticulum Database 0.08
Category members Pathway Pathway_1180 BIOCARTA_GABA_PATHWAY 0 0.01
Category members GO Category GO:0005875 microtubule associated complex Database 0
Category members Pathway Pathway_526 KEGG_REGULATION_OF_AUTOPHAGY 0 0
Category members GO Category GO:0000045 autophagic vacuole assembly Database 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0000421 autophagic vacuole membrane Database 0
Category members GO Category GO:0005764 lysosome Database 0
Category members GO Category GO:0005776 autophagic vacuole Database 0
Category members GO Category GO:0005930 axoneme Database 0
Category members GO Category GO:0006914 autophagy Database 0
Category members GO Category GO:0008625 extrinsic apoptotic signaling pathway via death domain receptors Database 0
Category members GO Category GO:0031410 cytoplasmic vesicle Database 0
Category members GO Category GO:0044297 cell body Database 0
Category members GO Category GO:0050811 GABA receptor binding Database 0


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