RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RPS27A	4	-1.330	2.560	-0.309	0.131	-0.009
UBC	3			-0.309	0.131	-0.009
UBC	3
UBC	3
UBB	3			-0.309	0.131	-0.009
UBA52	3	-1.260	2.180	-0.309	0.131	-0.009
UBA52	3	-1.260	2.180
VPS45	2	-1.960	4.060
VPS45	2	-1.960	4.060				0.939	1.074
TAB3	2	-0.550	1.560				0.022	-0.207
TAB3	2	-0.550	1.560
INSR	2	-0.850	0.830				1.143	0.785
CLCN6	1	2.010	-1.090
TAB1	1	1.890	-0.670
TAB1	1	1.890	-0.670	1.657
RAB22A	1	2.620	-1.080				0.590
RAB22A	1	2.620	-1.080	0.223
GGA3	1	1.320	-0.820
GGA3	1	1.320	-0.820
CHMP1A	1	-2.380	5.780
NDFIP1	1	2.140	-1.140
ATP6V0D1	1	-0.960	0.640
ATP6V0D1	1	-0.960	0.640	-0.252			-0.493	2.836
ZNRF2	1	0.050	-0.390
ANKFY1	1	-1.490	2.580	1.288	0.595	0.226		1.027
VTA1	0	-0.570	1.040	-1.688			-2.056	-1.205
SNX1	0	-0.090	-0.590
ATP6V0A1	0	-0.580	0.460				-0.439	0.009
TAB2	0	-0.030	-0.580
AP3D1	0	-0.770	1.000
AP3D1	0	-0.770	1.000	-3.722			0.111	0.159
TSG101	0	0.060	-0.480
APOB	0	0.130	0.050				-4.359	0.702
CHMP5	0	0.050	0.130
SPG21	0	1.320	-0.660
RFFL	0	0.680	-0.480
GGA1	0	1.030	-0.880
SUN2	0	-0.400	1.600		-2.388	-0.078	0.839	0.876
RHOV	0	0.340	-0.640
UBE2D3	0	-1.120	1.910		-0.582	-0.725	-0.315
EHD1	0	-0.060	0.300
RAB35	0	-0.410	0.700				0.588	0.619
RAB23	0	1.290	-1.270				-0.106	0.952
SNX3	0	0.210	-0.270
ACAP2	0	-0.460	0.370		-0.429	-0.542
PIKFYVE	0	-0.230	0.410
STEAP3	0	1.380	-1.140	-0.558				-0.578
STX12	0	0.070	0.130				-0.053	0.028
VPS4B	0	-0.670	1.580
VPS26A	0	-0.050	0.000	-0.098			0.542
TM9SF2	0	0.710	-0.710				0.503	0.592
LDLR	0	0.610	-0.680					-0.328
RBSN	0	-1.000	1.480
VPS25	0	1.140	-0.380
WDR44	0	-1.390	2.240
SORT1	0
TMEM165	0	-1.210	2.320
ARHGAP32	0	0.480	-0.120
MAP3K7	0	-1.120	1.140	-1.048
CD63	0	-1.190	1.800				1.412	0.887
SCYL2	0	0.190	0.660	-1.737	-0.391	-0.661	-1.365	-0.253
APPL2	0	0.480	-0.340
ITM2B	0	1.680	-1.240
KIF13A	0	-1.390	2.280
USP8	0	0.830	-0.320
TOM1L1	0	-0.380	0.180
ERBB2	0	-1.310	1.360
IKBKE	0
TBK1	0
RHOB	0	0.130	-0.210
RAB5A	0	-0.440	0.910				0.089	-0.362
RAB5A	0	0.080	0.240				0.089	-0.362
EGFR	0	-0.580	0.520				0.513	0.090
VPS37A	0	0.440	-0.560
APPL1	0	1.130	-0.340
TPCN2	0	0.360	0.190
PLEKHF1	0	0.780	-0.300
CD320	0	-1.350	1.900
VPS37C	0	0.110	-0.130
GOLIM4	0	1.130	-0.900				1.410	0.622
SNX18	0	1.820	-0.780				-2.601
ATP6V0A2	0	1.190	-0.740				0.137	-0.457
LAMP1	0	-0.830	0.960				0.121	0.196
TPCN1	0	1.120	-1.360
SNX2	0	-0.850	-0.050				-0.347	0.878
AP1G2	0	0.560	-0.680				0.454	1.062
PRAF2	0	-0.650	1.140					-1.167
TICAM2	0						0.641	1.449

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACAP2	Ubiquitylation	K347		0.107	_SCMLQADSEK(gl)LR_
ACAP2	Phosphorylation	S379	0.225	0.287	_KSS(ph)PSTGSLDSGNESK_
ACAP2	Phosphorylation	S521	-0.227	-0.224	_YSISLS(ph)PPEQQK_
ANKFY1	Ubiquitylation	K858	-0.208	0.547	_SAEAILK(gl)R_
ANKFY1	Ubiquitylation	K937	0.284		_VNELTK(gl)HR_
AP1G2	Ubiquitylation	K30		-0.209	_EVIQK(gl)ECAHIR_
AP3D1	Ubiquitylation	K7	0.529	0.464	_MVK(gl)GSIDR_
AP3D1	Phosphorylation	S9		0.952	_MVKGS(ph)IDR_
AP3D1	Ubiquitylation	K379	0.803	0.640	_NLMEIVKK(gl)_
AP3D1	Phosphorylation	T735	0.260	-0.981	_NTET(ph)SKSPEKDVPM(ox)VEK_
AP3D1	Phosphorylation	S736	-0.691	-0.892	_NTETS(ph)KSPEKDVPM(ox)VEK_
AP3D1	Phosphorylation	S738	-0.194	-0.008	_NTETSKS(ph)PEKDVPMVEK_
APPL1	Ubiquitylation	K66	-1.174	0.359	_LLK(gl)EYEK_
APPL1	Ubiquitylation	K124		-0.697	_DLK(gl)EILTLK_
APPL1	Ubiquitylation	K289		0.154	_NK(gl)TGLVSSTWDR_
APPL1	Ubiquitylation	K351	-0.236	0.892	_YCFQITSFDGKK(gl)_
APPL1	Phosphorylation	T399	-0.185		_VNQSALEAVT(ph)PSPSFQQR_
APPL1	Phosphorylation	S401	-0.233	-0.423	_VNQSALEAVTPS(ph)PSFQQR_
APPL1	Ubiquitylation	K638	-0.311	0.401	_ASEK(gl)QKEIER_
APPL2	Ubiquitylation	K226		0.352	_GAEMFSK(gl)R_
ARHGAP32	Phosphorylation	S703		0.067	_S(ph)AKSEESLTSLHAVDGDSK_
ARHGAP32	Phosphorylation	S706	0.359	0.358	_SAKS(ph)EESLTSLHAVDGDSK_
ARHGAP32	Phosphorylation	S871	0.466	0.562	_LSPFFTLDLS(ph)PTEDK_
ATP6V0A1	Ubiquitylation	K119		0.578	_EINTNQEALK(gl)R_
ATP6V0A1	Ubiquitylation	K235		0.326	_K(gl)ICEGFR_
ATP6V0A1	Ubiquitylation	K255	0.143		_K(gl)EMASGVNTR_
ATP6V0A1	Ubiquitylation	K366		-0.441	_MQTNQTPPTYNK(gl)TNK_
ATP6V0A1	Ubiquitylation	K369	-1.113	-0.322	_MQTNQTPPTYNKTNK(gl)_
ATP6V0A2	Ubiquitylation	K136	0.287		_VTK(gl)TFVKR_
ATP6V0A2	Ubiquitylation	K290	0.039	-0.079	_QVLCK(gl)AAESVYSR_
ATP6V0A2	Phosphorylation	S695	0.705	0.859	_KDS(ph)EEEVSLLGSQDIEEGNHQVEDGCR_
ATP6V0D1	Ubiquitylation	K384	0.065	-0.172	_AK(gl)IDNYIPIF_
CD320	Ubiquitylation	K278	-0.533	-0.267	_ESLLLSEQK(gl)TSLP_
CHMP1A	Ubiquitylation	K40	1.065	0.286	_ALLQK(gl)NVECAR_
CHMP1A	Ubiquitylation	K55	0.592		_K(gl)KNEGVNWLR_
CHMP1A	Ubiquitylation	K56	0.592		_K(gl)KNEGVNWLR_
CHMP1A	Ubiquitylation	K87	1.017	0.050	_VQTAVTMKGVTK(gl)_
CHMP1A	Ubiquitylation	K94	0.333		_NMAQVTK(gl)ALDK_
CHMP5	Ubiquitylation	K110	1.116	0.375	_TTVDAMK(gl)LGVK_
CLCN6	Ubiquitylation	K679	-0.037	0.829	_SQSMK(gl)SYPSSELR_
EGFR	Phosphorylation	T693	0.486	-0.139	_ELVEPLT(ph)PSGEAPNQALLR_
EGFR	Phosphorylation	S991		-0.041	_MHLPS(ph)PTDSNFYR_
EHD1	Ubiquitylation	K475	-0.521	-0.192	_SK(gl)LPNTVLGK_
ERBB2	Ubiquitylation	K200		-2.073	_ACHPCSPMCK(gl)GSR_
ERBB2	Ubiquitylation	K369		-0.742	_AVTSANIQEFAGCKK(gl)_
ERBB2	Ubiquitylation	K747	-0.505	-0.019	_GIWIPDGENVK(gl)IPVAIK_
ERBB2	Ubiquitylation	K854	-0.859		_NVLVK(gl)SPNHVK_
ERBB2	Phosphorylation	S1054	-0.476	-0.706	_S(ph)GGGDLTLGLEPSEEEAPR_
GGA1	Ubiquitylation	K118	-1.027	0.051	_VVSPK(gl)YLGSR_
GGA1	Ubiquitylation	K191	-0.968		_NVIFEDEEK(gl)SK_
GGA1	Ubiquitylation	K193	-0.968		_NVIFEDEEK(gl)SK_
GGA1	Ubiquitylation	K200	-0.112	-0.638	_LLK(gl)SSHPEDLR_
GGA1	Ubiquitylation	K215	-1.131	-0.524	_LIK(gl)EMVQEDQKR_
GGA1	Ubiquitylation	K223	-0.190	0.412	_EMVQEDQK(gl)R_
GGA3	Ubiquitylation	K100	-0.181	-0.013	_VVSPK(gl)YLGDR_
GGA3	Phosphorylation	S159	-1.676	-1.492	_TLIPS(ph)PPPRPK_
GGA3	Ubiquitylation	K176	-0.101		_NPVFDDEEKSK(gl)LLAK_
GGA3	Ubiquitylation	K180	-0.258	0.226	_LLAK(gl)LLK_
GGA3	Ubiquitylation	K185	-0.073	-0.327	_SK(gl)NPDDLQEANK_
GGA3	Ubiquitylation	K195	0.623	-0.266	_SKNPDDLQEANK(gl)LIK_
GGA3	Ubiquitylation	K198	-0.091	0.421	_LIK(gl)SMVKEDEAR_
GGA3	Ubiquitylation	K202	0.681	2.639	_SMVK(gl)EDEAR_
GGA3	Phosphorylation	S425	-0.079		_EQS(ph)DLDFFSPR_
IKBKE	Ubiquitylation	K137		-0.689	_DIK(gl)PGNIMR_
INSR	Ubiquitylation	K1022	-0.603		_EK(gl)ITLLR_
INSR	Ubiquitylation	K1047	0.305	0.711	_DIIK(gl)GEAETR_
INSR	Ubiquitylation	K1057	0.482	0.484	_VAVK(gl)TVNESASLR_
INSR	Ubiquitylation	K1352	1.606	2.754	_DGGSSLGFK(gl)R_
ITM2B	Ubiquitylation	K3	-1.978		_VK(gl)VTFNSALAQK_
ITM2B	Ubiquitylation	K13	-0.593	-0.224	_VKVTFNSALAQK(gl)EAK_
ITM2B	Ubiquitylation	K16	-1.083		_VTFNSALAQKEAK(gl)_
KIF13A	Phosphorylation	S1738	0.143	-0.064	_TGS(ph)CSELDACPSK_
MAP3K7	Phosphorylation	S374	0.149	-0.337	_GS(ph)SVESLPPTSEGK_
MAP3K7	Phosphorylation	S375	0.171	-0.087	_GSS(ph)VESLPPTSEGK_
MAP3K7	Phosphorylation	S389	1.072	1.445	_RMS(ph)ADMSEIEAR_
MAP3K7	Phosphorylation	S439	0.246	0.198	_S(ph)IQDLTVTGTEPGQVSSR_
MAP3K7	Ubiquitylation	K474	-0.385	-0.242	_MITTSGPTSEK(gl)PTR_
MAP3K7	Ubiquitylation	K589	-0.104		_SLSTYYQQCK(gl)K_
MAP3K7	Ubiquitylation	K590	-0.551	0.560	_K(gl)QLEVIR_
NDFIP1	Ubiquitylation	K83	-1.563	-0.959	_TK(gl)AEATIPLVPGRDEDFVGR_
NDFIP1	Ubiquitylation	K204		-0.511	_K(gl)MPETFSNLPR_
PIKFYVE	Phosphorylation	S307	0.463	0.429	_SAS(ph)ITNLSLDR_
PIKFYVE	Phosphorylation	S1714		-0.557	_SSS(ph)PIRLPEMSGGQTNR_
PIKFYVE	Phosphorylation	S1754	-0.097	0.057	_GTAGKS(ph)PDLSSQK_
PLEKHF1	Phosphorylation	S312	-0.501	-0.472	_QEEAEEQGAGS(ph)PGQPAHLAR_
RAB22A	Phosphorylation	S36	0.043	0.209	_FVQDHFDHNIS(ph)PTIGASFMTK_
RAB22A	Ubiquitylation	K178	-0.542		_RIPSTDANLPSGGK(gl)GFK_
RAB22A	Ubiquitylation	K181	-0.651		_RIPSTDANLPSGGK(gl)GFK_
RAB35	Ubiquitylation	K178	1.400	0.800	_DNLAK(gl)QQQQQQNDVVK_
RAB35	Ubiquitylation	K189	0.712	0.634	_QQQQQQNDVVK(gl)LTK_
RBSN	Phosphorylation	S211	0.904	0.349	_ESLS(ph)THTSPSQSPNSVHGSR_
RFFL	Phosphorylation	S240	0.527	1.050	_RAS(ph)LSDLTDLEDIEGLTVR_
RFFL	Phosphorylation	S242	0.797		_RASLS(ph)DLTDLEDIEGLTVR_
RHOB	Ubiquitylation	K135	0.050	-0.281	_MK(gl)QEPVRTDDGR_
RHOV	Ubiquitylation	K203		-0.141	_EGPVPQPQAQGLAEK(gl)IR_
RPS27A	Ubiquitylation	K6	1.066	0.995	_MQIFVK(gl)TLTGK_
RPS27A	Ubiquitylation	K11	-0.488	-0.081	_TLTGK(gl)TITLEVEPSDTIENVKAK(gl)_
RPS27A	Ubiquitylation	K27	-0.882	-0.159	_TLTGK(gl)TITLEVEPSDTIENVK(gl)AK_
RPS27A	Ubiquitylation	K29	-1.087	-1.029	_AK(gl)IQDK(gl)EGIPPDQQR_
RPS27A	Ubiquitylation	K33	-0.736	-0.407	_IQDK(gl)EGIPPDQQR_
RPS27A	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
RPS27A	Phosphorylation	S57	1.909	0.548	_TLS(ph)DYNIQK_
RPS27A	Ubiquitylation	K63	0.276	0.299	_TLSDYNIQK(gl)ESTLHLVLR_
RPS27A	Ubiquitylation	K99	0.109	2.111	_VK(gl)LAVLK_
RPS27A	Ubiquitylation	K104	0.674	2.102	_LAVLK(gl)YYK_
RPS27A	Ubiquitylation	K107	2.949	3.611	_YYK(gl)VDENGK(gl)ISR_
RPS27A	Ubiquitylation	K113	1.572	3.672	_YYK(gl)VDENGK(gl)ISR_
RPS27A	Ubiquitylation	K152	4.747	4.970	_CCLTYCFNK(gl)PEDK_
RPS27A	Ubiquitylation	K156	4.809		_CCLTYCFNKPEDK(gl)_
SCYL2	Phosphorylation	S677	0.455	0.911	_RAS(ph)LTLEEK_
SNX1	Ubiquitylation	K179	1.013	0.331	_SK(gl)QFAVK_
SNX1	Ubiquitylation	K223	-0.206		_SLIGMTKVK(gl)_
SNX18	Ubiquitylation	K466		-0.225	_EYQK(gl)VGQSFR_
SNX2	Ubiquitylation	K116	0.089	0.156	_IESK(gl)SMSAPVIFDR_
SNX2	Phosphorylation	S119		0.336	_SMS(ph)APVIFDR_
SNX2	Ubiquitylation	K181	0.631	1.039	_SEFSVK(gl)R_
SNX2	Ubiquitylation	K218		-0.014	_SIVGMTK(gl)VK_
SNX2	Ubiquitylation	K220	-0.305		_VK(gl)VGKEDSSSTEFVEK_
SNX2	Ubiquitylation	K294	-0.176		_AADAVNK(gl)MTIK_
SNX3	Ubiquitylation	K61	-0.354	0.545	_TNLPIFK(gl)LK_
SNX3	Ubiquitylation	K63	-0.420		_TNLPIFKLK(gl)_
SNX3	Ubiquitylation	K86	-0.772		_ESK(gl)VVVPPLPGK_
SNX3	Ubiquitylation	K95		-2.631	_VVVPPLPGK(gl)AFLR_
SNX3	Ubiquitylation	K158		0.876	_SYTPSK(gl)IR_
SORT1	Ubiquitylation	K294		-0.104	_TSDLGK(gl)SFK_
SORT1	Ubiquitylation	K388	-2.073	-0.343	_GIVYSK(gl)SLDR_
SPG21	Ubiquitylation	K124	-0.004		_FAEYTHK(gl)SPR_
STEAP3	Phosphorylation	S17		1.039	_PEEMDKPLISLHLVDS(ph)DSSLAK_
STEAP3	Ubiquitylation	K175	-0.783	-0.882	_QVPICGDQPEAK(gl)R_
STEAP3	Ubiquitylation	K472	-0.323		_ESTIK(gl)FTLPTDHALAEK_
STEAP3	Ubiquitylation	K484	-0.079	0.275	_FTLPTDHALAEK(gl)TSHV_
STX12	Ubiquitylation	K53	0.374	1.032	_NLMSQLGTK(gl)QDSSK_
STX12	Ubiquitylation	K58	-0.103	0.738	_QDSSK(gl)LQENLQQLQHSTNQLAK_
STX12	Ubiquitylation	K127	0.260		_VSEK(gl)EKESIAR_
STX12	Ubiquitylation	K129	-0.233		_VSEKEK(gl)ESIAR_
STX12	Phosphorylation	S142	0.838	0.911	_AGSRLS(ph)AEER_
SUN2	Ubiquitylation	K379		-0.225	_EAALK(gl)EDFRR_
TAB1	Phosphorylation	S7	-0.170	0.140	_S(ph)LLQSEQQPSWTDDLPLCHLSGVGSASNR_
TAB1	Phosphorylation	S16	-0.138	0.069	_SLLQSEQQPS(ph)WTDDLPLCHLSGVGSASNR_
TAB1	Ubiquitylation	K186	-1.015		_SYSADGK(gl)GTESHPPEDSWLK_
TAB1	Ubiquitylation	K371	0.032		_LSQLGLDAGK(gl)IK_
TAB1	Ubiquitylation	K373		-0.007	_LSQLGLDAGKIK(gl)_
TAB2	Phosphorylation	S580		-0.075	_S(ph)NSISQIPSLEEMQQLR_
TAB2	Phosphorylation	S582		0.331	_SNS(ph)ISQIPSLEEMQQLR_
TAB2	Ubiquitylation	K653	-0.519	-0.200	_SIIK(gl)TPK_
TAB3	Phosphorylation	S4	3.009	1.852	_(ac)AQS(ph)SPQLDIQVLHDLR_
TAB3	Phosphorylation	S5	3.009	1.852	_(ac)AQS(ph)SPQLDIQVLHDLR_
TBK1	Ubiquitylation	K137		-0.689	_DIK(gl)PGNIMR_
TM9SF2	Ubiquitylation	K328	0.364		_TLHK(gl)DIAR_
TMEM165	Ubiquitylation	K198	-1.517		_MSPDEGQEELEEVQAELK(gl)K_
TMEM165	Ubiquitylation	K199	-1.102		_MSPDEGQEELEEVQAELK(gl)K_
TMEM165	Ubiquitylation	K208	-1.496	-0.854	_TK(gl)LLNGPGDVETGTSITVPQKK_
TMEM165	Ubiquitylation	K227		-0.650	_LLNGPGDVETGTSITVPQK(gl)K_
TMEM165	Ubiquitylation	K228	-0.843	-0.650	_LLNGPGDVETGTSITVPQKK(gl)_
TOM1L1	Ubiquitylation	K149	-0.037		_EVYLDLVKK(gl)_
TOM1L1	Ubiquitylation	K298		-1.457	_ILEQNK(gl)NQK_
TOM1L1	Ubiquitylation	K301	-1.762	-1.457	_NQK(gl)EATNTTSEPSAPSQDLLDLSPSPR_
TOM1L1	Phosphorylation	S321	0.265	-0.164	_EATNTTSEPSAPSQDLLDLS(ph)PSPR_
TOM1L1	Phosphorylation	S323	-1.219	-1.229	_EATNTTSEPSAPSQDLLDLSPS(ph)PR_
TPCN1	Ubiquitylation	K765		0.099	_TK(gl)SDLSLK_
TPCN2	Ubiquitylation	K382		0.584	_QAMMEK(gl)VR_
TSG101	Ubiquitylation	K237	-1.467	0.252	_ASLISAVSDK(gl)LR_
TSG101	Ubiquitylation	K257	0.192	0.329	_AQAELNALK(gl)R_
UBA52	Ubiquitylation	K6	1.066	0.995	_MQIFVK(gl)TLTGK_
UBA52	Ubiquitylation	K11	-0.488	-0.081	_TLTGK(gl)TITLEVEPSDTIENVKAK(gl)_
UBA52	Ubiquitylation	K27	-0.882	-0.159	_TLTGK(gl)TITLEVEPSDTIENVK(gl)AK_
UBA52	Ubiquitylation	K29	-1.087	-1.029	_AK(gl)IQDK(gl)EGIPPDQQR_
UBA52	Ubiquitylation	K33	-0.736	-0.407	_IQDK(gl)EGIPPDQQR_
UBA52	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
UBA52	Phosphorylation	S57	1.909	0.548	_TLS(ph)DYNIQK_
UBA52	Ubiquitylation	K63	0.276	0.299	_TLSDYNIQK(gl)ESTLHLVLR_
UBA52	Ubiquitylation	K93	0.181	2.418	_YNCDK(gl)MICR_
UBA52	Ubiquitylation	K99	0.109	2.111	_VK(gl)LAVLK_
UBA52	Ubiquitylation	K104	0.674	2.102	_LAVLK(gl)YYK_
UBA52	Ubiquitylation	K107	2.949	3.611	_YYK(gl)VDENGK(gl)ISR_
UBA52	Ubiquitylation	K113	1.572	3.672	_YYK(gl)VDENGK(gl)ISR_
UBA52	Ubiquitylation	K152	4.747	4.970	_CCLTYCFNK(gl)PEDK_
UBA52	Ubiquitylation	K156	4.809		_CCLTYCFNKPEDK(gl)_
UBB	Ubiquitylation	K6	1.066	0.995	_MQIFVK(gl)TLTGK_
UBB	Ubiquitylation	K11	-0.488	-0.081	_TLTGK(gl)TITLEVEPSDTIENVKAK(gl)_
UBB	Ubiquitylation	K27	-0.882	-0.159	_TLTGK(gl)TITLEVEPSDTIENVK(gl)AK_
UBB	Ubiquitylation	K29	-1.087	-1.029	_AK(gl)IQDK(gl)EGIPPDQQR_
UBB	Ubiquitylation	K33	-0.736	-0.407	_IQDK(gl)EGIPPDQQR_
UBB	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
UBB	Phosphorylation	S57	1.909	0.548	_TLS(ph)DYNIQK_
UBB	Ubiquitylation	K63	0.276	0.299	_TLSDYNIQK(gl)ESTLHLVLR_
UBB	Ubiquitylation	K99	0.109	2.111	_VK(gl)LAVLK_
UBB	Ubiquitylation	K104	0.674	2.102	_LAVLK(gl)YYK_
UBB	Ubiquitylation	K107	2.949	3.611	_YYK(gl)VDENGK(gl)ISR_
UBB	Ubiquitylation	K113	1.572	3.672	_YYK(gl)VDENGK(gl)ISR_
UBB	Ubiquitylation	K152	4.747	4.970	_CCLTYCFNK(gl)PEDK_
UBB	Ubiquitylation	K156	4.809		_CCLTYCFNKPEDK(gl)_
UBC	Ubiquitylation	K6	1.066	0.995	_MQIFVK(gl)TLTGK_
UBC	Ubiquitylation	K11	-0.488	-0.081	_TLTGK(gl)TITLEVEPSDTIENVKAK(gl)_
UBC	Ubiquitylation	K27	-0.882	-0.159	_TLTGK(gl)TITLEVEPSDTIENVK(gl)AK_
UBC	Ubiquitylation	K29	-1.087	-1.029	_AK(gl)IQDK(gl)EGIPPDQQR_
UBC	Ubiquitylation	K33	-0.736	-0.407	_IQDK(gl)EGIPPDQQR_
UBC	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
UBC	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
UBC	Ubiquitylation	K48	-0.062	0.315	_LIFAGK(gl)QLEDGRTLSDYNIQK_
UBC	Phosphorylation	S57	1.909	0.548	_TLS(ph)DYNIQK_
UBC	Ubiquitylation	K63	0.276	0.299	_TLSDYNIQK(gl)ESTLHLVLR_
UBC	Ubiquitylation	K99	0.109	2.111	_VK(gl)LAVLK_
UBC	Ubiquitylation	K104	0.674	2.102	_LAVLK(gl)YYK_
UBC	Ubiquitylation	K107	2.949	3.611	_YYK(gl)VDENGK(gl)ISR_
UBC	Ubiquitylation	K113	1.572	3.672	_YYK(gl)VDENGK(gl)ISR_
UBC	Ubiquitylation	K152	4.747	4.970	_CCLTYCFNK(gl)PEDK_
UBC	Ubiquitylation	K156	4.809		_CCLTYCFNKPEDK(gl)_
UBE2D3	Ubiquitylation	K8	0.326		_INK(gl)ELSDLAR_
UBE2D3	Ubiquitylation	K101	-0.229		_SQWSPALTISK(gl)_
UBE2D3	Ubiquitylation	K128	0.754		_IYK(gl)TDRDK(gl)YNR_
UBE2D3	Ubiquitylation	K133	0.005		_IYK(gl)TDRDK(gl)YNR_
UBE2D3	Ubiquitylation	K144	0.212	0.074	_EWTQK(gl)YAM_
USP8	Phosphorylation	S392	-0.015	0.284	_SDVS(ph)PIIQPVPSIK_
USP8	Phosphorylation	T577	-0.048	0.069	_RCPT(ph)PEIQKK_
USP8	Phosphorylation	S716	0.750	0.023	_S(ph)YSSPDITQAIQEEEKR_
USP8	Phosphorylation	S718	0.338	0.273	_SYS(ph)SPDITQAIQEEEKR_
VPS25	Ubiquitylation	K92	-0.408	-0.002	_KGNLEWLDK(gl)SK_
VPS25	Ubiquitylation	K94	0.254	-0.002	_GNLEWLDKSK(gl)_
VPS26A	Ubiquitylation	K57	-0.401		_VNLAFK(gl)QPGKR_
VPS26A	Ubiquitylation	K242	-0.544		_YEIMDGAPVK(gl)GESIPIR_
VPS37A	Ubiquitylation	K29		-0.751	_SASSSAAGSPGGLTSLQQQK(gl)QR_
VPS37C	Ubiquitylation	K5	0.354		_(ac)METLK(gl)DK_
VPS45	Ubiquitylation	K185		-0.309	_YQLSSEAAK(gl)R_
VPS45	Ubiquitylation	K192	0.231	0.142	_LAECVK(gl)QVITK_
VPS45	Ubiquitylation	K257	-0.698	-0.241	_VPGISK(gl)DLR_
VPS45	Ubiquitylation	K297	-0.027	0.174	_NLMEDFQKK(gl)_
VPS45	Ubiquitylation	K304	0.581		_EQQK(gl)LESIADMK_
VPS45	Ubiquitylation	K330		1.737	_M(ox)SGTVSK(gl)HVTVVGELSR_
VPS45	Ubiquitylation	K378	0.005		_LLQNPK(gl)VTEFDAAR_
VPS45	Ubiquitylation	K443	-0.539	-0.864	_GSDLFSPK(gl)DAVAITK_
VPS45	Ubiquitylation	K450	0.498	0.947	_DAVAITK(gl)QFLK_
VPS45	Ubiquitylation	K454	-0.293	-0.013	_QFLK(gl)GLK_
VPS45	Ubiquitylation	K483	-2.673	-0.766	_LK(gl)ENLYPYLGPSTLR_
VPS4B	Phosphorylation	S102	-0.658	-0.952	_EGQPSPADEKGNDS(ph)DGEGESDDPEK_
WDR44	Phosphorylation	S3	-0.908	-0.683	_(ac)AS(ph)ESDTEEFYDAPEDVHLGGGYPVGSPGK_
WDR44	Phosphorylation	S5	-0.479		_(ac)ASES(ph)DTEEFYDAPEDVHLGGGYPVGSPGK_
WDR44	Phosphorylation	T7		-0.457	_(ac)ASESDT(ph)EEFYDAPEDVHLGGGYPVGS(ph)PGK_
WDR44	Phosphorylation	S27	-0.762	-0.964	_(ac)ASESDTEEFYDAPEDVHLGGGYPVGS(ph)PGK_
WDR44	Phosphorylation	S50	0.302	0.446	_VGNES(ph)PVQELK_
WDR44	Phosphorylation	S96	0.055	0.391	_ELSDQATAS(ph)PIVAR_
WDR44	Phosphorylation	T158		0.438	_LT(ph)QTSSTEQLNVLETETEVLNK_
WDR44	Phosphorylation	S161	0.460	0.341	_LTQTS(ph)STEQLNVLETETEVLNK_
WDR44	Phosphorylation	S162		0.389	_LTQTSS(ph)TEQLNVLETETEVLNK_
WDR44	Phosphorylation	T219	-0.654	0.074	_HLT(ph)PEPDIVASTK_
WDR44	Phosphorylation	S262	0.364	0.395	_RKS(ph)ELEFETLK_
WDR44	Phosphorylation	S342	1.047	1.089	_S(ph)NSGRELTDEEILASVMIK_
WDR44	Phosphorylation	S344	1.047	0.804	_SNS(ph)GRELTDEEILASVMIK_
WDR44	Phosphorylation	T349	0.432	0.599	_SNSGRELT(ph)DEEILASVMIK_
WDR44	Phosphorylation	S403	0.130	0.079	_EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR_
WDR44	Phosphorylation	S561	-0.589	-0.418	_VS(ph)PSPSQESLSSSK_
WDR44	Phosphorylation	S563	-0.297		_YNTEGRVSPS(ph)PSQESLSSSK_
WDR44	Phosphorylation	S568	-0.586		_YNTEGRVSPSPSQES(ph)LSSSK_
WDR44	Ubiquitylation	K756	-1.135		_ITGIEPLPGENK(gl)ILVTSNDSR_
ZNRF2	Phosphorylation	S82	1.096	1.927	_S(ph)LGGAVGSVASGAR_
ZNRF2	Phosphorylation	S135	-0.329	-0.249	_DRPVGGS(ph)PGGPR_