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Query: VTA1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VTA1 0 -3.909 -0.570 1.040 -1.688 -2.056 -1.205

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for VTA1:





Protein-protein Interactions for VTA1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait VPS4B Cat. description Hein, Mann, Cell 2015
Category members IP bait CHMP2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHMP5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FSD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPAST Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STMN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TEAD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS4A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VTA1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring VTA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VTA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members Pathway Pathway_666 KEGG_ENDOCYTOSIS 0 1.25
Category members Pathway Pathway_474 REACTOME_MEMBRANE_TRAFFICKING 0 1.14
Category members GO Category GO:0016197 endosomal transport Database 0.43
Category members Pathway Pathway_800 REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT 0 0.06
Category members GO Category GO:0010008 endosome membrane Database 0


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