RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
VCL	1	0.570	-0.620				2.233	0.870
ARPIN	1	-0.880	2.860
NISCH	0	0.060	0.270				-0.247	0.240
PKP2	0	0.120	0.970				0.814	0.742
PKP2	0	0.120	0.970
PTPRU	0	0.620	0.040
OSBPL8	0	0.270	-0.840		-1.590	-0.451	0.036	0.268
STK24	0	0.490	-0.300				-0.371	0.364
STK24	0	0.490	-0.300	-0.052
STK24	0	0.490	-0.300
KANK1	0	0.160	-0.720
GTPBP4	0	-1.150	1.590		-0.623	-0.725
GTPBP4	0	-1.150	1.590				-0.486	0.142
SLC9A3R1	0	0.240	-0.810
SRF	0	0.670	-1.020
DPYSL3	0	0.400	-0.420	-0.511
NKX2-1	0	-0.730	0.480		0.174	0.236
NKX2-1	0	-0.730	0.480				-0.123
IL1RN	0	-0.390	0.260					-3.729
FAM60A	0	0.090	-0.240		-0.860	0.174		-0.590
TPM1	0	0.280	-0.190
ABHD2	0	-0.280	0.490
SLIT2	0	-0.940	1.740				-3.112	-1.071
MIA3	0	-0.480	0.870
MIA3	0	-0.480	0.870				0.112	0.137
FLCN	0	1.070	-0.810
RNF20	0	1.470	-0.660	1.382	0.059	0.693		-0.069
ABR	0	-1.000	1.510
ABHD6	0	-0.550	1.000
DLC1	0	-0.650	0.390
DACH1	0
CLIC4	0			-0.105
BCL2	0	0.910	-0.740
EGFL7	0	-1.200	1.990
DAG1	0	0.210	-0.400
SCAI	0	-1.100	0.980	-0.147
ALOX15B	0
RAP2B	0	-1.290	2.220				0.185	0.477
IFITM1	0	0.560	-0.530
IFITM1	0	1.200	-0.770
NF2	0	-1.080	1.470				0.218	-0.073
NF2	0	-1.080	1.470
BCR	0	-0.110	-0.410
BCR	0	0.680	-0.700
BCR	0	-0.110	-0.410	1.326
BCR	0	0.680	-0.700	1.326
NF1	0	1.000	-0.500				0.444	-0.190

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ABHD2	Ubiquitylation	K36		-0.787	_CLNLK(gl)SPTAPPDLYFQDSGLSR_
ABHD2	Ubiquitylation	K57	-2.003	-0.300	_FLLK(gl)SCPLLTK_
ABHD2	Ubiquitylation	K152		0.160	_TFVDYAQK(gl)NGYR_
ABHD2	Ubiquitylation	K265		-0.248	_FYNFLMADNMK(gl)K_
ABHD2	Ubiquitylation	K266		-0.248	_FYNFLMADNMK(gl)K_
ABHD6	Ubiquitylation	K126		-0.199	_SSLDDLSIDGQVK(gl)R_
ABR	Phosphorylation	S72	-1.041	-1.433	_SQGGGDGVS(ph)PTPPEGLAPGVEAGK_
ALOX15B	Ubiquitylation	K214		0.144	_SLNEMK(gl)R_
ARPIN	Ubiquitylation	K182		0.119	_LEAGTVTK(gl)CNFTGDGK_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
BCR	Phosphorylation	S122	-1.850	-1.388	_ASASRPQPAPADGADPPPAEEPEARPDGEGS(ph)PGK_
BCR	Phosphorylation	S354	-0.057	0.015	_VS(ph)PSPTTYR_
BCR	Phosphorylation	S459	-0.638	-0.740	_HQDGLPYIDDS(ph)PSSSPHLSSK_
BCR	Phosphorylation	S1035	0.931	1.055	_LSVKFNS(ph)R_
BCR	Ubiquitylation	K1066		0.971	_SK(gl)VPYIVR_
CLIC4	Ubiquitylation	K106	-0.220	0.166	_YLK(gl)LSPK_
CLIC4	Ubiquitylation	K146	-0.028	0.596	_GLLK(gl)TLQK_
CLIC4	Ubiquitylation	K199	0.892	0.090	_LHIVK(gl)VVAK_
CLIC4	Ubiquitylation	K249	-0.463		_DEFTNTCPSDKEVEIAYSDVAK(gl)R_
DACH1	Ubiquitylation	K713	-0.067	-0.579	_EQAEQTLK(gl)QAASTDSLR_
DAG1	Ubiquitylation	K793		0.843	_LTLEDQATFIK(gl)K_
DAG1	Ubiquitylation	K794	0.899		_LTLEDQATFIKK(gl)_
DAG1	Ubiquitylation	K881	-0.342		_GSRPK(gl)NMTPYR_
DLC1	Phosphorylation	S842		-0.139	_TGS(ph)FHGPGHISLR_
DLC1	Phosphorylation	S946		-0.497	_FSDEGDSDSALDSVSPCPSS(ph)PK_
DPYSL3	Phosphorylation	S102	-1.104	-0.731	_EESREPAPAS(ph)PAPAGVEIR_
DPYSL3	Phosphorylation	T622	-0.228		_GM(ox)YDGPVFDLTT(ph)TPK_
DPYSL3	Phosphorylation	T623	-0.604	-0.464	_GM(ox)YDGPVFDLTTT(ph)PK_
DPYSL3	Phosphorylation	S636	-0.777	-0.696	_GS(ph)PTRPNPPVR_
EGFL7	Ubiquitylation	K93		-1.651	_YACCPGWK(gl)R_
FAM60A	Ubiquitylation	K128		-0.446	_AGPSLK(gl)TTLKPK_
FAM60A	Ubiquitylation	K151		-0.173	_SNQISK(gl)LQK_
FAM60A	Ubiquitylation	K220		0.733	_ICCGIIYK(gl)GR_
FLCN	Phosphorylation	S62	-0.873	-0.905	_AHS(ph)PAEGASVESSSPGPK_
GTPBP4	Ubiquitylation	K187		0.585	_SSFINK(gl)VTR_
IFITM1	Ubiquitylation	K3	-0.716	-1.338	_M(ox)HK(gl)EEHEVAVLGPPPSTILPR_
KANK1	Phosphorylation	S325	0.481	0.652	_SYS(ph)AGNASQLEQLSR_
MIA3	Phosphorylation	S727	-0.131	-0.291	_VEEDDYPS(ph)EELLEDENAINAK_
MIA3	Ubiquitylation	K1477	-0.359		_LLQLK(gl)LR_
MIA3	Ubiquitylation	K1485	-0.562		_ASVSTK(gl)CNLEDQVK_
MIA3	Ubiquitylation	K1537	-0.142		_EMALQKK(gl)_
MIA3	Ubiquitylation	K1723	-0.975		_WSAEASGK(gl)PSPSDPGSGTATMMNSSSR_
MIA3	Phosphorylation	S1906	-0.790	-0.967	_DLLPSGSRDEPPPASQSTSQDCSQALKQS(ph)P_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
NF2	Phosphorylation	S13	0.833	0.924	_MSFSS(ph)LKR_
NF2	Phosphorylation	S493	1.436	1.115	_RLS(ph)MEIEK_
NF2	Ubiquitylation	K586	0.399	-0.041	_LTLQSAK(gl)SR_
NISCH	Ubiquitylation	K942		0.996	_NSFK(gl)LSR_
NISCH	Ubiquitylation	K1009	0.484		_ASLQDLK(gl)TVVIAK_
NISCH	Phosphorylation	S1284	-0.365	-0.534	_TPS(ph)PEPVDKDFYSEFGNK_
NISCH	Ubiquitylation	K1303	0.675	0.227	_TTGK(gl)MENYELIHSSR_
OSBPL8	Phosphorylation	T13	0.040		_(ac)M(ox)EGGLADGEPDRT(ph)SLLGDSKDVLGPSTVVANSDESQLLTPGK_
OSBPL8	Phosphorylation	S14	0.237	0.627	_(ac)MEGGLADGEPDRTS(ph)LLGDSK_
OSBPL8	Phosphorylation	T39		-0.210	_DVLGPSTVVANSDESQLLT(ph)PGK_
OSBPL8	Phosphorylation	S63	-0.125	0.863	_DLHQPS(ph)LSPASPHSQGFER_
OSBPL8	Phosphorylation	S65	-0.155	0.044	_DLHQPSLS(ph)PASPHSQGFER_
OSBPL8	Phosphorylation	S68	-0.891	-0.231	_DLHQPSLSPAS(ph)PHSQGFER_
OSBPL8	Phosphorylation	S71		0.689	_DLHQPSLSPASPHS(ph)QGFER_
OSBPL8	Phosphorylation	S120	1.496	1.221	_KES(ph)LKVQK_
OSBPL8	Ubiquitylation	K698	0.085	-0.077	_AINAK(gl)DQTEATQEK_
PKP2	Phosphorylation	S82	0.172	0.473	_TSS(ph)VPEYVYNLHLVENDFVGGR_
PKP2	Ubiquitylation	K134	0.755	-0.110	_GTAQYSSQK(gl)SVEER_
PKP2	Phosphorylation	S135	0.873	0.521	_GTAQYSSQKS(ph)VEER_
PKP2	Phosphorylation	S151	0.440	0.323	_RLEIS(ph)PDSSPER_
PKP2	Phosphorylation	S154	0.267	0.205	_LEISPDS(ph)SPER_
PKP2	Phosphorylation	S155	-0.249	0.172	_RLEISPDSS(ph)PER_
PKP2	Phosphorylation	S329	0.351	0.264	_AHLTVGQAAAGGS(ph)GNLLTER_
PKP2	Ubiquitylation	K643	1.209	0.678	_NIQTDNNK(gl)SIGCFGSR_
PTPRU	Phosphorylation	S853	-0.196	-0.039	_SGGVTEASSLLGGS(ph)PR_
RNF20	Phosphorylation	S136	-0.065	-0.170	_ALVVPEPEPDS(ph)DSNQER_
RNF20	Phosphorylation	S138	-0.540	-0.691	_ALVVPEPEPDSDS(ph)NQER_
RNF20	Phosphorylation	S522		-0.414	_SGSALLQS(ph)QSSTEDPKDEPAELKPDSEDLSSQSSASK_
RNF20	Phosphorylation	S524	-0.171	-0.459	_SGSALLQSQS(ph)STEDPKDEPAELKPDSEDLSSQSSASK_
SLC9A3R1	Ubiquitylation	K50	-1.732		_LVEPGSPAEK(gl)AGLLAGDR_
SLC9A3R1	Ubiquitylation	K101	-2.049		_LLVVDPETDEQLQK(gl)LGVQVR_
SLC9A3R1	Phosphorylation	S280	-0.611	-0.277	_EALAEAALES(ph)PRPALVR_
SLC9A3R1	Phosphorylation	S290	-0.404	-0.401	_SAS(ph)SDTSEELNSQDSPPK_
SLIT2	Ubiquitylation	K72		-1.544	_ITK(gl)TDFAGLR_
SLIT2	Ubiquitylation	K103		0.625	_GAFQDLK(gl)ELER_
SLIT2	Ubiquitylation	K825		0.073	_TFDGLK(gl)SLR_
SRF	Phosphorylation	S224	-0.512	-0.458	_ALIQTCLNSPDS(ph)PPR_
STK24	Phosphorylation	S4	0.269	0.161	_(ac)AHS(ph)PVAVQVPGMQNNIADPEELFTK_
STK24	Phosphorylation	S4	0.816	0.517	_(ac)AHS(ph)PVQSGLPGMQNLK_
STK24	Ubiquitylation	K162	-0.327	0.155	_GLDYLHSEKK(gl)_
STK24	Ubiquitylation	K197	-0.399	0.038	_LADFGVAGQLTDTQIK(gl)R_
STK24	Ubiquitylation	K255	-0.986		_VLFLIPK(gl)NNPPTLVGDFTK_
STK24	Ubiquitylation	K298	0.008	-0.419	_FIVK(gl)NSK_
STK24	Ubiquitylation	K302	-0.101	0.068	_K(gl)TSYLTELIDR_
STK24	Ubiquitylation	K420	-0.470		_SIAVAEAACPGITDK(gl)MVK_
STK24	Ubiquitylation	K423	-0.470	-0.024	_SIAVAEAACPGITDKMVK(gl)_
TPM1	Ubiquitylation	K30	-1.537		_AEQAEADKK(gl)AAEDR_
VCL	Ubiquitylation	K219	-0.376	0.161	_NSK(gl)NQGIEEALK_
VCL	Ubiquitylation	K228		0.195	_NQGIEEALK(gl)NR_
VCL	Phosphorylation	S288		0.364	_DPS(ph)ASPGDAGEQAIR_
VCL	Phosphorylation	S290		-0.415	_DPSAS(ph)PGDAGEQAIR_
VCL	Ubiquitylation	K476	0.572	0.356	_QVATALQNLQTK(gl)TNR_
VCL	Ubiquitylation	K639	0.665	0.718	_AANFENHSGK(gl)LGATAEK_
VCL	Ubiquitylation	K666	0.502		_STVEGIQASVK(gl)TAR_
VCL	Ubiquitylation	K768	0.256		_ILLVAK(gl)R_
VCL	Ubiquitylation	K784	-0.707		_EAVK(gl)AASDELSK_
VCL	Ubiquitylation	K792	-0.889	-1.201	_AASDELSK(gl)TISPMVMDAK_
VCL	Ubiquitylation	K815	-0.780		_AVAGNISDPGLQK(gl)SFLDSGYR_
VCL	Ubiquitylation	K1020	0.159	0.667	_ALIQCAK(gl)DIAK_
VCL	Ubiquitylation	K1070	0.504	0.692	_ILSTVK(gl)ATMLGR_