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Query: RNF20

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RNF20 0 1.830 1.470 -0.660 1.382 0.059 0.693 -0.069

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RNF20 Phosphorylation S136 -0.065 -0.170 _ALVVPEPEPDS(ph)DSNQER_
RNF20 Phosphorylation S522 -0.414 _SGSALLQS(ph)QSSTEDPKDEPAELKPDSEDLSSQSSASK_
RNF20 Phosphorylation S524 -0.171 -0.459 _SGSALLQSQS(ph)STEDPKDEPAELKPDSEDLSSQSSASK_
RNF20 Phosphorylation S138 -0.540 -0.691 _ALVVPEPEPDSDS(ph)NQER_

Background Information for RNF20:


Pubmed-RNF20 »
Uniprot-RNF20 »
Biogrid-RNF20 »
ProteomicsDB-RNF20 »

Tumorportal-RNF20 »
COSMIC-RNF20 »
GenomeRNAi-RNF20 »
Genecards-RNF20


Protein-protein Interactions for RNF20
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP152 Cat. description Hein, Mann, Cell 2015
Category members IP bait CHMP4B Cat. description Hein, Mann, Cell 2015
Category members IP bait GBA Cat. description Hein, Mann, Cell 2015
Category members IP bait LLGL2 Cat. description Hein, Mann, Cell 2015
Category members IP bait OAZ1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCNA Cat. description Hein, Mann, Cell 2015
Category members IP bait RBPJ Cat. description Hein, Mann, Cell 2015
Category members IP bait SEPT6 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLAIN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLAIN2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TSNAX Cat. description Hein, Mann, Cell 2015
Category members IP bait USO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC53 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait COG6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DSN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM196A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GTF2E2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL1F6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MED21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait OLFM3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLEKHO2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSMD7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB6B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNAP29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TCP10L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TEX13A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBE2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WAC Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RNF20
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_RING IPR001841 0
Category members Prefoldin IPR009053 0
Category members STAT_TF_coiled-coil IPR015988 0


Protein complexes (CORUM database) featuring RNF20
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1165 RNF20-RNF40-UbE2E1 complex Database 0.21


Categories featuring RNF20
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0006511 ubiquitin-dependent protein catabolic process Database 3.57
Category members GO Category GO:0031625 ubiquitin protein ligase binding Database 2.54
Category members GO Category GO:0000209 protein polyubiquitination Database 2.46
Category members GO Category GO:0002039 p53 binding Database 2.06
Category members GO Category GO:0010390 histone monoubiquitination Database 1.39
Category members GO Category GO:0042393 histone binding Database 0.94
Category members GO Category GO:0030336 negative regulation of cell migration Database 0.85
Category members GO Category GO:0033523 histone H2B ubiquitination Database 0.77
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0033503 HULC complex Database 0.54
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0000151 ubiquitin ligase complex Database 0.24
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0016574 histone ubiquitination Database 0.2
Category members GO Category GO:0004871 signal transducer activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0031062 positive regulation of histone methylation Database 0


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