RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MAPK9	1	0.110	-0.490
NRCAM	1	0.920	-0.800
WWP1	1	-1.400	1.340
WWP1	1	0.850	-1.030
WWP1	1	-1.400	1.340	-0.346			0.023	0.613
WWP1	1	0.850	-1.030	-0.346			0.023	0.613
SMO	1	-0.690	1.110		1.532
SH3GL3	1	-1.870	3.600
SH3GL1	1	0.960	-1.010
TP53BP2	1	1.060	-0.800				-0.399	-0.481
PAM	1	0.410	-0.620
XRCC4	1	-0.240	0.070
RPS6KA3	1	-1.550	2.890
HTT	1	-0.200	-0.360	0.632			0.847	0.550
JARID2	0	-1.180	1.730				-1.360	-1.367
ZIC2	0	0.440	-0.440
NCKAP1	0	1.120	-0.620	0.347	0.023	-0.306	1.181	0.448
RPS6KA6	0	-1.250	1.770
ALDH3A2	0	1.420	0.020	0.189	-0.686	-0.332	0.525	-0.106
GSTP1	0	-1.460	2.360				0.731	-2.952
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240				-0.235	-0.851
STK3	0	-0.570	0.720
STK3	0	-0.570	0.720				-0.235	-0.851
GLI3	0	-0.980	1.650
SH3GL2	0	0.310	-0.450
ALDH5A1	0	1.110	-0.930	0.317	1.095	-0.202	0.644	1.164
EIF2B2	0	-0.010	0.410
THOC6	0	0.100	-0.300	-0.547	0.540	0.379	-0.405	-0.286
NES	0	-0.060	-0.070				0.320	0.542
DCLK1	0	-1.340	1.710
DCLK1	0	-1.340	1.710
ACVR1B	0	-0.720	1.030
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
ZEB1	0	0.640	-0.450
ZEB1	0	0.640	-0.450
PTS	0	-0.570	1.190	0.479	-1.431	0.053
LZIC	0	-0.390	-0.220				-0.081	0.340
KLK6	0	-0.160	-0.280
ZEB2	0	-0.420	1.170		0.364	0.973
CHD7	0	0.220	-0.050	-1.168			0.026	0.297
UGT8	0	0.600	-0.560				0.728	0.465
PNMA1	0	-0.100	0.610
DNER	0	-0.450	-0.080
POU3F3	0	-0.340	0.810
RNF103	0	0.500	-0.190

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACVR1B	Ubiquitylation	K215		0.000	_TIVLQEIIGK(gl)GR_
CHD7	Phosphorylation	S557		-0.452	_VPVHQHS(ph)PSEPFLEKPVPDM(ox)TQVSGPNAQLVK_
CHD7	Phosphorylation	S1874	-0.088	-0.155	_TPFKDEIDEFANS(ph)PSEDKEESMEIHATGK_
CHD7	Phosphorylation	S2533		-0.792	_RTS(ph)LSAEDAEVTK_
CHD7	Phosphorylation	S2559	-0.345	-0.513	_NIPS(ph)PGQLDPDTR_
CHD7	Phosphorylation	S2956	0.383	-0.248	_DGETLEGS(ph)DAEESLDK_
DCLK1	Phosphorylation	S32	0.456	0.202	_VNGLPS(ph)PTHSAHCSFYR_
DCLK1	Phosphorylation	T336	-1.793		_SPSPSPT(ph)SPGSLR_
DCLK1	Phosphorylation	S337	-0.893	-0.694	_SPSPSPTS(ph)PGSLR_
DCLK1	Phosphorylation	S352	0.641	0.487	_SSQHGGS(ph)STSLASTK_
DCLK1	Phosphorylation	S352	0.103	0.523	_DLYRPLS(ph)SDDLDSVGDSV_
DCLK1	Phosphorylation	S353		0.566	_DLYRPLSS(ph)DDLDSVGDSV_
DNER	Ubiquitylation	K733		-0.847	_PLVTLIK(gl)_
EIF2B2	Ubiquitylation	K7	-0.071		_PGSAAK(gl)GSELSER_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
JARID2	Phosphorylation	S455	-0.219	-0.009	_LEEAHQAEKPQS(ph)PPK_
MAPK9	Phosphorylation	Y185		3.533	_TACTNFMMTPY(ph)VVTR_
NCKAP1	Ubiquitylation	K12	-1.114	-0.228	_SVLQPSQQK(gl)LAEK_
NCKAP1	Ubiquitylation	K16	0.326		_LAEK(gl)LTILNDR_
NCKAP1	Ubiquitylation	K190		-0.009	_LGQMIVDYENPLK(gl)K_
NCKAP1	Ubiquitylation	K191		-0.009	_LGQMIVDYENPLK(gl)K_
NCKAP1	Ubiquitylation	K1075		-0.817	_IGQETDK(gl)TTTR_
NES	Phosphorylation	S680		-0.168	_ENQEPLRS(ph)PEVGDEEALRPLTK_
NES	Phosphorylation	S768		0.226	_S(ph)LGEQDQMTLRPPEK_
NRCAM	Phosphorylation	S1299		4.018	_KEKEPAEGNESSEAPS(ph)PVNAMNSFV_
PAM	Ubiquitylation	K716		-1.381	_TDTK(gl)EFVR_
PAM	Phosphorylation	S918	0.585	1.654	_GKGS(ph)GGLNLGNFFASR_
PNMA1	Ubiquitylation	K84		-0.158	_EMPGK(gl)GGVWK_
PNMA1	Ubiquitylation	K218		-0.009	_ILK(gl)SNNPAITTAECLK_
PNMA1	Ubiquitylation	K249	-1.705	-0.867	_DAQIK(gl)FLNTYQNPGEK_
PNMA1	Ubiquitylation	K274	-2.572	-0.136	_LEPLLQK(gl)_
PNMA1	Ubiquitylation	K283	-0.880	0.317	_GAIDK(gl)DNVNQAR_
POU3F3	Ubiquitylation	K377	0.051	-0.035	_LK(gl)PLLNK_
PTS	Phosphorylation	S19	1.016	0.773	_RIS(ph)FSASHR_
RNF103	Ubiquitylation	K65		-1.326	_GLGYSGLPEK(gl)K_
RNF103	Ubiquitylation	K66		-1.326	_GLGYSGLPEK(gl)K_
RNF103	Ubiquitylation	K184		-1.838	_STLIMSVPQTSTSK(gl)GK_
RNF103	Ubiquitylation	K186		-1.838	_STLIMSVPQTSTSK(gl)GK_
RPS6KA3	Phosphorylation	S227	0.363	0.496	_AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA3	Phosphorylation	T231	0.315		_KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA3	Ubiquitylation	K322	-0.076	-0.376	_LGAGPDGVEEIK(gl)R_
RPS6KA3	Phosphorylation	T365	-0.892	-1.003	_T(ph)PKDSPGIPPSANAHQLFR_
RPS6KA3	Phosphorylation	S369	-0.621	-0.862	_TPKDS(ph)PGIPPSANAHQLFR_
RPS6KA3	Ubiquitylation	K566		-0.152	_ICDFGFAK(gl)QLR_
RPS6KA3	Phosphorylation	S715	-0.923	-0.880	_NQS(ph)PVLEPVGR_
RPS6KA6	Phosphorylation	S227	0.363	0.496	_AYS(ph)FCGTVEYM(ox)APEVVNR_
RPS6KA6	Phosphorylation	T231	0.315		_KAYSFCGT(ph)VEYMAPEVVNR_
RPS6KA6	Ubiquitylation	K566		-0.152	_ICDFGFAK(gl)QLR_
SH3GL1	Ubiquitylation	K7		-0.268	_(ac)SVAGLK(gl)K_
SH3GL1	Ubiquitylation	K8	-0.654		_(ac)SVAGLKK(gl)_
SH3GL1	Ubiquitylation	K76	-0.032	1.606	_LTMLNTVSK(gl)IR_
SH3GL1	Ubiquitylation	K177	-0.477	0.450	_QGK(gl)IPDEELR_
SH3GL1	Phosphorylation	S287	-0.011	0.143	_IAASS(ph)SFR_
SH3GL1	Phosphorylation	S288	0.348	-0.194	_IAASSS(ph)FR_
SH3GL2	Ubiquitylation	K7		-0.268	_(ac)SVAGLK(gl)K_
SH3GL2	Ubiquitylation	K8	-0.654		_(ac)SVAGLKK(gl)_
SH3GL2	Ubiquitylation	K177	-0.477	0.450	_QGK(gl)IPDEELR_
SH3GL3	Ubiquitylation	K7		-0.268	_(ac)SVAGLK(gl)K_
SH3GL3	Ubiquitylation	K8	-0.654		_(ac)SVAGLKK(gl)_
STK3	Ubiquitylation	K176		-0.350	_DIK(gl)AGNILLNTEGHAK_
STK3	Ubiquitylation	K205	-0.223	-0.386	_LADFGVAGQLTDTMAK(gl)R_
STK3	Phosphorylation	S344	0.416	0.115	_ELEEEEENS(ph)DEDELDSHTM(ox)VK_
STK3	Phosphorylation	S344	0.573	0.366	_EMDQDDEENS(ph)EEDEMDSGTMVR_
STK3	Phosphorylation	S413	0.603	1.205	_NATS(ph)PQVQRPSFMDYFDK_
STK3	Ubiquitylation	K481	-0.782		_LK(gl)ALDPMMER_
STK4	Ubiquitylation	K176		-0.350	_DIK(gl)AGNILLNTEGHAK_
STK4	Ubiquitylation	K205	-0.223	-0.386	_LADFGVAGQLTDTMAK(gl)R_
STK4	Phosphorylation	S320	0.555	0.552	_EVDQDDEENS(ph)EEDEMDSGTM(ox)VR_
STK4	Phosphorylation	S344	0.573	0.366	_EMDQDDEENS(ph)EEDEMDSGTMVR_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
TP53BP2	Ubiquitylation	K102	0.149		_SQDPSLK(gl)R_
TP53BP2	Ubiquitylation	K152	0.224		_QQQQIEAQQQLLATK(gl)EQR_
TP53BP2	Ubiquitylation	K224	-0.390		_LVEEIEQMNNLFQQK(gl)QR_
TP53BP2	Ubiquitylation	K234	-0.113		_ELVLAVSK(gl)VEELTR_
TP53BP2	Ubiquitylation	K268	-0.429		_LYK(gl)ELQLR_
TP53BP2	Ubiquitylation	K283	-0.866		_NKLNQEQNAK(gl)LQQQR_
TP53BP2	Ubiquitylation	K303	-0.302		_NSEVAVMDK(gl)R_
TP53BP2	Ubiquitylation	K322	-2.045		_AALQQK(gl)ENLPVSSDGNLPQQAASAPSR_
TP53BP2	Phosphorylation	S480	0.458	0.944	_NQS(ph)SEDILR_
TP53BP2	Phosphorylation	S556	1.443	1.433	_VLLS(ph)PSIPSVGQDQTLSPGSK_
TP53BP2	Phosphorylation	S569		1.774	_VLLS(ph)PSIPSVGQDQTLS(ph)PGSK_
TP53BP2	Phosphorylation	S698	-0.309	-0.362	_IPRPLS(ph)PTK_
TP53BP2	Phosphorylation	T700	-0.449	-0.429	_IPRPLSPT(ph)K_
TP53BP2	Phosphorylation	S737	-0.172	-0.748	_RSS(ph)ITEPEGPNGPNIQK_
WWP1	Ubiquitylation	K66	-0.890		_WK(gl)QPLTVIVTPVSK_
WWP1	Ubiquitylation	K328	-0.364	0.487	_SSSAFEAAK(gl)SR_
WWP1	Ubiquitylation	K350	0.049	0.396	_VYYVDHVEK(gl)R_
WWP1	Ubiquitylation	K446	-1.514	-1.539	_EFDPLGPLPPGWEK(gl)R_
WWP1	Ubiquitylation	K478	-1.265		_SQGQLNEK(gl)PLPEGWEMR_
WWP1	Ubiquitylation	K513	-0.564	1.593	_TGK(gl)SALDNGPQIAYVR_
WWP1	Ubiquitylation	K536	-1.895	1.126	_SSVTK(gl)GGPQIAYER_
WWP1	Ubiquitylation	K861	-0.810	0.596	_VGK(gl)ENWLPR_
XRCC4	Ubiquitylation	K178	0.552		_EALETDLYK(gl)R_
XRCC4	Ubiquitylation	K197	0.264		_SLHNK(gl)LLNAAQER_
XRCC4	Phosphorylation	S259	-0.552	1.634	_DDSIIS(ph)SLDVTDIAPSR_
XRCC4	Phosphorylation	S260	-0.545	1.299	_DDSIISS(ph)LDVTDIAPSR_
XRCC4	Phosphorylation	S320	0.439	1.683	_KEHISAENM(ox)S(ph)LETLR_
ZEB1	Ubiquitylation	K77	0.237		_FTSLK(gl)EHIK_
ZEB1	Ubiquitylation	K398	-0.697	0.131	_SEK(gl)LPEDLTVK_
ZEB1	Phosphorylation	S713	-0.669	-0.753	_NNDQPQSANANEPQDSTVNLQS(ph)PLK_
ZEB1	Phosphorylation	S1025		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZEB1	Phosphorylation	T1026		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZEB2	Phosphorylation	S1124		0.491	_AYLQSITPQGYSDS(ph)EERESMPR_
ZIC2	Ubiquitylation	K253	-0.697	0.374	_QQCIK(gl)QELICK_