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Query: JARID2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
JARID2 0 -1.225 -1.180 1.730 -1.360 -1.367

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
JARID2 Phosphorylation S455 -0.219 -0.009 _LEEAHQAEKPQS(ph)PPK_

Background Information for JARID2:


Pubmed-JARID2 »
Uniprot-JARID2 »
Biogrid-JARID2 »
ProteomicsDB-JARID2 »

Tumorportal-JARID2 »
COSMIC-JARID2 »
GenomeRNAi-JARID2 »
Genecards-JARID2


Protein-protein Interactions for JARID2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDC16 Cat. description Hein, Mann, Cell 2015
Category members IP bait CDK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait EED Cat. description Hein, Mann, Cell 2015
Category members IP bait EZH2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SLAIN2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TTLL7 Cat. description Hein, Mann, Cell 2015
Category members IP bait AEBP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SUZ12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in JARID2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_C5HC2 IPR004198 0.33
Category members TF_JmjN IPR003349 0.08
Category members ARID/BRIGHT_DNA-bd IPR001606 0
Category members JmjC_dom IPR003347 0


Protein complexes (CORUM database) featuring JARID2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring JARID2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0001889 liver development Database 0.51
Category members GO Category GO:0035098 ESC/E(Z) complex Database 0.47
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008285 negative regulation of cell proliferation Database 0.28
Category members GO Category GO:0035097 histone methyltransferase complex Database 0.26
Category members GO Category GO:0042127 regulation of cell proliferation Database 0.06
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members GO Category GO:0007417 central nervous system development Database 0
Category members GO Category GO:0031061 negative regulation of histone methylation Database 0
Category members GO Category GO:0048536 spleen development Database 0
Category members GO Category GO:0048538 thymus development Database 0
Category members GO Category GO:0048863 stem cell differentiation Database 0
Category members GO Category GO:0051574 positive regulation of histone H3-K9 methylation Database 0


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