RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PSMD11	3	-1.450	2.970	0.214	-0.184	0.431	0.233	0.368
MSX2	1	-0.260	0.240
TCF7L1	1	-2.040	2.970	-0.741
JARID2	0	-1.180	1.730				-1.360	-1.367
RUNX2	0
ELL3	0	-0.260	0.230
LIN28A	0	0.700	-0.230
MTF2	0						1.093	0.072
HMGA2	0	0.340	-0.490
ZNF281	0	1.890	-0.960
ZNF281	0	1.890	-0.960		-1.258	0.818	1.187	-0.499
MSX1	0	0.420	-0.450
SOX2	0	-0.250	0.870

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ELL3	Ubiquitylation	K229	-2.474	-3.642	_SVPVATVELEEK(gl)R_
ELL3	Ubiquitylation	K358	-1.671		_IIQEYKK(gl)_
HMGA2	Phosphorylation	S44	-0.564	-0.762	_KQQQEPTGEPS(ph)PK_
HMGA2	Phosphorylation	S105	-0.055	-0.046	_KPAQEETEETSSQES(ph)AEED_
JARID2	Phosphorylation	S455	-0.219	-0.009	_LEEAHQAEKPQS(ph)PPK_
LIN28A	Ubiquitylation	K102		-0.047	_SAK(gl)GLESIR_
MSX1	Phosphorylation	S154		0.148	_RLS(ph)PPACTLR_
MSX2	Phosphorylation	S3	-1.986	-1.774	_(ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S5	-1.986		_AS(ph)PS(ph)KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S63		3.351	_EAS(ph)PLPAESASAGATLRPLLLSGHGAR_
MSX2	Phosphorylation	S91	-0.783	-0.727	_EAHS(ph)PGPLVKPFETASVK_
MSX2	Phosphorylation	S123		-0.062	_SENSEDGAAWMQEPGRYS(ph)PPPR_
PSMD11	Phosphorylation	S14	1.600	1.518	_AQS(ph)LLSTDR_
PSMD11	Ubiquitylation	K32	-0.182		_EASIDILHSIVK(gl)R_
PSMD11	Ubiquitylation	K420	0.365		_VVDSLYNKAK(gl)_
RUNX2	Phosphorylation	S96	0.504	-0.399	_RFS(ph)PPSSSLQPGK_
RUNX2	Ubiquitylation	K244	0.258		_NASAVMK(gl)NQVAR_
SOX2	Phosphorylation	S251	0.157	-0.109	_SEASSS(ph)PPVVTSSSHSR_
TCF7L1	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
ZNF281	Ubiquitylation	K622		-1.827	_SESQK(gl)EDPFNIAEPR_
ZNF281	Phosphorylation	S651	0.362	0.137	_VDLHTSGEHSELVQEENLS(ph)PGTQTPSNDK_
ZNF281	Phosphorylation	T654	0.273		_VDLHTSGEHSELVQEENLSPGT(ph)QTPSNDK_
ZNF281	Phosphorylation	T888	0.078	-0.076	_VKT(ph)PTSQSYR_