RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TSC2	1	0.810	-0.710
TSC2	1	0.810	-0.710	-0.715
PRKAR1A	1	-0.550	0.230
PRKAR1A	1	-0.550	0.230
ITPRIP	1	-1.710	2.650
ILK	1	-1.560	3.680				-0.463	-0.527
TAF7	1	0.270	-0.210
FGFR1OP	1	-0.600	0.800
LRP6	0	0.210	0.050
PSEN1	0	0.930	-1.110
GSTP1	0	-1.460	2.360				0.731	-2.952
DNAJC3	0	0.690	-0.440				-0.823
DNAJA3	0	-0.010	-0.240	0.786	0.226	-0.161	-0.800	-0.347
HSPB1	0	0.710	-0.660	-0.632
PRKAG2	0	1.300	-0.990	0.278			-0.667
GADD45A	0	1.050	-0.170
MLLT1	0	-0.550	1.140				0.694	0.478
MLLT1	0	1.060	-0.750				0.694	0.478
SH3BP5	0	0.360	-0.060
INPP5K	0	-0.690	1.160
TAOK3	0	-0.440	0.370
TAOK3	0	-0.440	0.370					1.169
TARBP2	0	1.300	-0.480
RB1	0	1.180	-1.070		0.429	0.755
RB1	0	1.180	-1.070
PDPK1	0	0.050	-0.440
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
CDKN2A	0	-0.080	-0.260	-0.556		-1.080	-3.270	-1.110
UBASH3B	0	0.990	-0.760
PRKCA	0	0.750	-0.690				0.349	0.585
PRKCA	0	0.750	-0.690
GNAQ	0	0.140	-0.310				0.052	0.449
NCK1	0	-0.370	0.580
DUS2	0	-0.830	1.180
YWHAG	0				0.298	-0.025
YWHAG	0			1.488			0.233	0.098
TRIB1	0	-0.220	-0.430
PPM1E	0	0.690	-0.090
SFN	0	0.890	0.120				-4.300
PAK2	0	-0.760	1.040
NF2	0	-1.080	1.470				0.218	-0.073
NF2	0	-1.080	1.470
CHP1	0	0.130	0.190				-0.105	0.192
NF1	0	1.000	-0.500				0.444	-0.190
GMFB	0	-0.640	1.110
AKT1S1	0	-0.070	-0.260

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
AKT1S1	Phosphorylation	S88	-2.758	-2.516	_AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR_
AKT1S1	Phosphorylation	S92	-3.077	-3.065	_AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR_
AKT1S1	Phosphorylation	T97		-3.450	_AATAARPPAPPPAPQPPS(ph)PTPSPPRPT(ph)LAR_
AKT1S1	Phosphorylation	S183	-0.539	-0.207	_S(ph)LPVSVPVWGFK_
AKT1S1	Phosphorylation	S203	-0.783	-0.726	_SS(ph)DEENGPPSS(ph)PDLDR_
AKT1S1	Phosphorylation	S211	-0.801	-1.311	_SS(ph)DEENGPPS(ph)SPDLDR_
AKT1S1	Phosphorylation	S212	0.721	-1.311	_SS(ph)DEENGPPSS(ph)PDLDR_
AKT1S1	Phosphorylation	T246	0.502	0.358	_LNT(ph)SDFQK_
DUS2	Ubiquitylation	K337		-1.649	_LSAK(gl)TSEQTGEPAEDTSGVIK_
FGFR1OP	Phosphorylation	S156	-0.647	-0.663	_EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK_
FGFR1OP	Phosphorylation	S160	-0.079	-0.321	_EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK_
FGFR1OP	Phosphorylation	T170	-0.492	-1.069	_TSAQTT(ph)PSKIPR_
FGFR1OP	Phosphorylation	S326		1.712	_IGS(ph)LGLGTGEDDDYVDDFNSTSHR_
GADD45A	Ubiquitylation	K12	-0.515	0.281	_TLEEFSAGEQK(gl)TER_
GADD45A	Ubiquitylation	K29		0.092	_VGDALEEVLSK(gl)ALSQR_
GMFB	Ubiquitylation	K110		-1.081	_NK(gl)LVQTAELTK_
GNAQ	Ubiquitylation	K16	0.245		_TLESIMACCLSEEAK(gl)EAR_
GNAQ	Ubiquitylation	K102	-0.299		_IPYK(gl)YEHNK_
HSPB1	Phosphorylation	S82	1.036	0.723	_QLS(ph)SGVSEIR_
HSPB1	Ubiquitylation	K198		-1.654	_AQLGGPEAAK(gl)SDETAAK_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
INPP5K	Ubiquitylation	K248	-0.741	0.167	_LLFPPTYK(gl)FDR_
ITPRIP	Ubiquitylation	K244		-0.595	_QGYGQIK(gl)VVR_
LRP6	Ubiquitylation	K1443		-0.221	_GK(gl)SMISSLSIMGGSSGPPYDR_
MLLT1	Phosphorylation	S155		-0.447	_AGGVMVMPEGADTVSRPS(ph)PDYPMLPTIPLSAFSDPK_
MLLT1	Phosphorylation	S292	-0.227	-0.275	_RPATADS(ph)PKPSAK_
MLLT1	Phosphorylation	S475		1.258	_RS(ph)PESCSKPEK_
NCK1	Phosphorylation	S85	-0.027	-0.877	_RKPS(ph)VPDSASPADDSFVDPGER_
NCK1	Phosphorylation	S91		0.493	_RKPSVPDSAS(ph)PADDSFVDPGER_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
NF2	Phosphorylation	S13	0.833	0.924	_MSFSS(ph)LKR_
NF2	Phosphorylation	S493	1.436	1.115	_RLS(ph)MEIEK_
NF2	Ubiquitylation	K586	0.399	-0.041	_LTLQSAK(gl)SR_
PAK2	Phosphorylation	S2	-1.228	-0.902	_(ac)S(ph)DNGELEDKPPAPPVR_
PAK2	Ubiquitylation	K136	1.213		_FYDSNTVK(gl)QK_
PAK2	Phosphorylation	S141	-0.294	-0.321	_YLS(ph)FTPPEK_
PAK2	Ubiquitylation	K370	-0.565		_DIK(gl)SDNVLLGMEGSVK_
PDPK1	Phosphorylation	S241	0.358	0.361	_ANS(ph)FVGTAQYVSPELLTEK_
PDPK1	Ubiquitylation	K257	0.571	-0.234	_ANSFVGTAQYVSPELLTEK(gl)SACK_
PPM1E	Ubiquitylation	K329		-0.500	_FVQK(gl)AAR_
PRKAG2	Ubiquitylation	K78		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K79		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K243	-0.525	-0.505	_VSALPVVDEK(gl)GR_
PRKAR1A	Ubiquitylation	K63	-1.895		_LEKEEAK(gl)QIQNLQK_
PRKAR1A	Ubiquitylation	K70	-0.869	0.073	_QIQNLQK(gl)AGTR_
PRKAR1A	Phosphorylation	S83	-0.969	-0.776	_EDEIS(ph)PPPPNPVVK_
PRKAR1A	Ubiquitylation	K92	-3.269	-2.395	_TDSREDEISPPPPNPVVK(gl)GR_
PRKAR1A	Ubiquitylation	K222	0.412	0.536	_TNVK(gl)LWGIDR_
PRKAR1A	Ubiquitylation	K244	-0.384	3.721	_K(gl)MYEEFLSK_
PRKAR1A	Ubiquitylation	K261	-0.886		_VSILESLDK(gl)WER_
PRKAR1A	Ubiquitylation	K346		0.329	_GPLK(gl)CVK_
PRKAR1A	Ubiquitylation	K349	-0.425	-0.103	_CVK(gl)LDRPR_
PRKAR1A	Ubiquitylation	K367	-0.939	0.044	_VLGPCSDILK(gl)R_
PRKCA	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCA	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCA	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCA	Ubiquitylation	K316	-0.522	-0.535	_LGPAGNK(gl)VISPSEDR_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
RB1	Phosphorylation	S69	-3.602	-3.397	_TAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR_
RB1	Ubiquitylation	K97	-0.546		_LK(gl)IPDHVR_
RB1	Phosphorylation	T388	0.005	0.116	_TLQTDSIDSFETQRT(ph)PR_
RB1	Phosphorylation	T405	-0.851	-0.901	_KSNLDEEVNVIPPHT(ph)PVR_
RB1	Phosphorylation	S820		-0.019	_S(ph)PYKFPSSPLR_
RB1	Ubiquitylation	K823	-2.214		_SPYK(gl)FPSSPLR_
RB1	Phosphorylation	S827	0.824	0.111	_FPSS(ph)PLR_
RB1	Phosphorylation	S839	-0.701	-1.045	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K842		-0.751	_IPGGNIYISPLK(gl)SPYK_
RB1	Phosphorylation	S843	-0.701	-0.022	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K846	-2.084		_SPYK(gl)ISEGLPTPTK_
RB1	Phosphorylation	T853	0.039	-0.555	_ISEGLPT(ph)PTKM(ox)T(ph)PR_
RB1	Ubiquitylation	K856	-1.350		_ISEGLPTPTK(gl)MTPR_
RB1	Phosphorylation	T858	-0.782	0.564	_ISEGLPT(ph)PTKMT(ph)PR_
RB1	Ubiquitylation	K879	-0.187		_FQK(gl)INQMVCNSDR_
SFN	Ubiquitylation	K11	0.561	0.388	_AK(gl)LAEQAER_
SFN	Ubiquitylation	K49	-0.093	0.337	_NLLSVAYK(gl)_
SH3BP5	Ubiquitylation	K6		-0.925	_(ac)MDAALK(gl)R_
SH3BP5	Ubiquitylation	K90	-1.258		_LDELVKK(gl)_
SH3BP5	Ubiquitylation	K173		-0.619	_VMEAEQTK(gl)TR_
SH3BP5	Ubiquitylation	K181	-1.200		_SELVHK(gl)ETAAR_
SH3BP5	Ubiquitylation	K240		-0.180	_LTLAK(gl)GEYK_
TAF7	Ubiquitylation	K40	-0.984	0.784	_AVQSGHVNLK(gl)DR_
TAF7	Phosphorylation	S171		1.574	_LLS(ph)TDAEAVSTR_
TAF7	Phosphorylation	S201	0.225	0.409	_EAENQGLDISS(ph)PGMSGHR_
TAOK3	Phosphorylation	S9	-0.793	0.108	_AGS(ph)LKDPEIAELFFKEDPEK_
TAOK3	Phosphorylation	S324	0.159	0.189	_NGPLNES(ph)QEDEEDSEHGTSLNR_
TAOK3	Phosphorylation	S421	-0.535	-0.355	_ASDPQS(ph)PPQVSR_
TAOK3	Ubiquitylation	K587	0.700		_QEWLSK(gl)QK_
TARBP2	Phosphorylation	S142	-1.379	-1.564	_S(ph)PPMELQPPVS(ph)PQQSECNPVGALQELVVQK_
TARBP2	Phosphorylation	S152	-0.860	-0.978	_SPPMELQPPVS(ph)PQQSECNPVGALQELVVQK_
TARBP2	Phosphorylation	S156		-0.795	_SPPM(ox)ELQPPVS(ph)PQQSECNPVGALQELVVQK_
TRIB1	Ubiquitylation	K46	-2.031	-0.877	_LLDADDAAAVAAK(gl)CPR_
TSC2	Ubiquitylation	K3		-1.397	_(ac)AK(gl)PTSKDSGLK_
TSC2	Ubiquitylation	K14		-1.297	_DSGLKEK(gl)FK_
TSC2	Ubiquitylation	K69		0.051	_MIGQICEVAK(gl)TK_
TSC2	Ubiquitylation	K71		-0.157	_MIGQICEVAKTK(gl)_
TSC2	Ubiquitylation	K258		-0.278	_ELCEPCWK(gl)LMR_
TSC2	Ubiquitylation	K634		1.610	_LGLPNK(gl)DGVVR_
TSC2	Phosphorylation	S950	-0.152	-0.529	_STS(ph)LNERPK_
TSC2	Phosphorylation	S1064		-0.927	_SLLGLDSGELQSGPESSSS(ph)PGVHVR_
TSC2	Phosphorylation	S1248		-0.604	_SNTDSAVVMEEGS(ph)PGEVPVLVEPPGLEDVEAALGMDRR_
TSC2	Phosphorylation	S1329	-0.120		_S(ph)SSSPELQTLQDILGDPGDK_
TSC2	Phosphorylation	S1331	-0.262		_SSS(ph)SPELQTLQDILGDPGDKADVGR_
TSC2	Phosphorylation	S1332		-0.063	_SSSS(ph)PELQTLQDILGDPGDK_
TSC2	Phosphorylation	S1355	0.174	0.351	_ADVGRLS(ph)PEVK_
TSC2	Phosphorylation	S1362		0.859	_S(ph)QSGTLDGESAAWSASGEDSR_
TSC2	Phosphorylation	S1364	0.522	0.550	_SQS(ph)GTLDGESAAWSASGEDSR_
TSC2	Phosphorylation	T1366	0.137		_SQSGT(ph)LDGESAAWSASGEDSR_
TSC2	Phosphorylation	S1396		0.498	_S(ph)PSGLRPR_
TSC2	Phosphorylation	S1743	0.596		_RLISS(ph)VEDFTEFV_
UBASH3B	Ubiquitylation	K21	-0.506	-0.681	_EELYSK(gl)VTPR_
UBASH3B	Ubiquitylation	K411	-0.160	-0.779	_YWLSQCFDAK(gl)GR_
YWHAG	Ubiquitylation	K10	1.000	1.070	_VDREQLVQK(gl)AR_
YWHAG	Ubiquitylation	K69	0.708	1.242	_VISSIEQK(gl)TSADGNEK_
YWHAG	Ubiquitylation	K120		1.386	_NCSETQYESK(gl)VFYLK_
YWHAG	Ubiquitylation	K125	0.512	0.946	_VFYLK(gl)MK_
YWHAG	Ubiquitylation	K142	0.456	0.610	_YLAEVATGEK(gl)R_