bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
PID_ATR_PATHWAY
(Pathway_865)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
RPA1 6 0.500 0.350 3.133 3.046 0.303 1.770 2.112
FANCD2 5 -0.650 0.520 1.226 0.362 -0.007 1.535 0.808
RPA2 3 -1.830 3.700 1.524
RPA2 3 -1.830 3.700 2.592
TOPBP1 3 -2.480 4.260 -0.269 0.277
MCM2 2 0.740 -0.140 0.552 0.052
MCM2 2 0.740 -0.140 1.288
MCM2 2 0.740 -0.140
CLSPN 2 0.600 -0.710 -0.324 0.360 -0.207
NBN 2 -0.220 -0.170 0.708 0.569 -0.563 0.354
TIMELESS 2 -0.820 1.340 -0.115 -0.810 1.489 0.880 0.424
CHEK1 2 -1.170 1.560
CHEK1 2 -1.170 1.560
ATRIP 2 -1.370 1.920 -0.656 0.735 0.448
PLK1 2 3.098 -0.387 0.212 -1.949 -0.610
TIPIN 1 0.660 -0.190
PPP2R1A 1 -0.260 -0.200 0.714 0.973
PPP2R1A 1 -0.260 -0.200 -0.003 -0.196 0.057
PPP2R1A 1 -0.260 -0.200 1.697 1.450 -1.553
PPP2R1B 1 1.240 -0.730 1.697 1.450 -1.553
SMARCAL1 1 -1.220 1.410 1.748
RAD9A 1 -2.070 3.350
ATR 1 -1.040 0.920 0.671 1.041 0.708
RAD51 0 -1.260 1.920
FBXW11 0 -0.780 0.530 0.532 -1.791 0.313
CDC6 0 -1.190 2.070
CEP164 0
RFC5 0 0.500 -0.920
RFC5 0 0.500 -0.920 -1.112 -0.547 0.316 -0.391 0.586
RAD1 0 0.550 0.120
PPP2CA 0 0.160 -0.540 0.194 0.044 0.215
PPP2CA 0 0.160 -0.540 0.650 1.189
CDK2 0 -0.040 -0.300 -0.578 -0.797
CDK2 0 -0.040 -0.300 -0.202 -0.884 -0.107 -0.097 -0.501
RFC3 0 0.010 -0.490 0.265 -0.461 0.387 0.658 0.371
MDM2 0 -0.210 0.080
CCNA2 0 -0.530 0.260
CDC25C 0 -0.100 0.100
RFC4 0 1.100 -0.890 -0.721 -0.389 0.425 -0.194 0.037
CDC25A 0 0.260 -0.100
YWHAZ 0 0.880 -0.450 0.433 1.494 -0.337 0.631 0.064
MCM7 0 -0.260 -0.010 0.361 -0.040
MCM7 0 -0.260 -0.010 0.592
YWHAB 0 0.628 -0.543
YWHAB 0 0.507 0.271 0.503

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ATR Ubiquitylation K32 -0.929 _ELGSATPEEYNTVVQK(gl)PR_
ATR Phosphorylation S435 0.516 0.284 _RLS(ph)SSLNPSK_
ATR Ubiquitylation K746 -1.823 _NLK(gl)ATSQHECSSSQLK_
ATR Ubiquitylation K1019 1.662 _TLGK(gl)QLNVNRR_
ATR Ubiquitylation K1600 -0.437 _FQALK(gl)AEK_
ATR Ubiquitylation K2106 -0.136 _AYEWEK(gl)AGR_
ATR Ubiquitylation K2604 0.657 1.118 _LQGVIK(gl)TR_
ATRIP Phosphorylation S224 -0.208 -0.178 _LAAPSVSHVS(ph)PR_
ATRIP Phosphorylation S239 0.401 _KNPSVVIKPEACS(ph)PQFGK_
ATRIP Phosphorylation S518 1.549 1.561 _SLVHRLS(ph)DGDM(ox)TSALR_
CCNA2 Ubiquitylation K54 -0.746 _AALAVLK(gl)SGNPR_
CCNA2 Ubiquitylation K68 -1.274 _GLAQQQRPK(gl)TR_
CDC25A Ubiquitylation K120 1.111 _LLGCSPALK(gl)R_
CDC25C Phosphorylation S185 -0.645 _YLGS(ph)PITTVPK_
CDC25C Phosphorylation S233 -0.702 -0.657 _SPS(ph)MPENLNRPR_
CDC25C Phosphorylation S280 0.256 0.326 _TVS(ph)LCDITITQMLEEDSNQGHLIGDFSK_
CDC6 Ubiquitylation K33 1.448 _NSSDAK(gl)LEPTNVQTVTCSPR_
CDC6 Phosphorylation S45 -0.996 _LEPTNVQTVTCS(ph)PR_
CDC6 Phosphorylation S54 -0.860 _ALPLS(ph)PR_
CDC6 Phosphorylation S106 -0.049 _LVFDNQLTIKS(ph)PSK_
CDC6 Ubiquitylation K221 1.075 _ILQDLKK(gl)_
CDK2 Ubiquitylation K6 -0.130 -0.399 _(ac)MENFQK(gl)VEK_
CDK2 Ubiquitylation K6 0.011 -0.784 _(ac)M(ox)EDYTK(gl)IEK_
CDK2 Phosphorylation T14 0.429 _IGEGT(ph)YGVVYK_
CDK2 Phosphorylation Y15 0.697 0.743 _IGEGTY(ph)GVVYK_
CDK2 Ubiquitylation K20 0.272 _IGEGTYGVVYK(gl)AR_
CDK2 Ubiquitylation K20 -0.327 -0.270 _IGEGTYGVVYK(gl)GR_
CDK2 Ubiquitylation K24 0.366 _NK(gl)LTGEVVALKK_
CDK2 Ubiquitylation K33 0.033 _NKLTGEVVALK(gl)K_
CDK2 Ubiquitylation K33 0.736 0.239 _TTGQVVAMK(gl)K_
CDK2 Ubiquitylation K34 0.542 _LTGEVVALKK(gl)_
CDK2 Ubiquitylation K34 -0.306 _TTGQVVAMKK(gl)_
CDK2 Ubiquitylation K58 0.312 -0.262 _EISLLK(gl)ELR_
CDK2 Ubiquitylation K136 -0.468 _DLK(gl)PQNLLIDDK(gl)GTIK_
CDK2 Ubiquitylation K145 0.161 -0.954 _DLKPQNLLIDDK(gl)GTIK_
CDK2 Ubiquitylation K149 -0.038 _GTIK(gl)LADFGLAR_
CDK2 Ubiquitylation K251 -0.047 -1.236 _WK(gl)PGSLASHVK_
CDK2 Ubiquitylation K280 0.179 -1.210 _MLIYDPAK(gl)R_
CDK2 Ubiquitylation K298 -1.907 -2.380 _QDFSK(gl)VVPPLDEDGR_
CEP164 Phosphorylation S246 -1.251 -0.145 _GLEERLS(ph)PPLPHEER_
CHEK1 Ubiquitylation K53 0.879 _AVDCPENIK(gl)K_
CHEK1 Ubiquitylation K54 0.738 _AVDCPENIKK(gl)_
CHEK1 Phosphorylation S296 -0.098 0.184 _VTS(ph)GGVSESPSGFSK_
CHEK1 Phosphorylation S300 1.091 _VTSGGVS(ph)ESPSGFSK_
CHEK1 Phosphorylation S302 1.750 _VTSGGVSES(ph)PSGFSK_
CHEK1 Phosphorylation S317 1.903 _HIQSNLDFS(ph)PVNSASSEENVK_
CHEK1 Ubiquitylation K399 -0.582 _ETCEK(gl)LGYQWK_
CLSPN Phosphorylation S260 2.501 2.218 _KEPSLESGVHS(ph)FEEGSELSK_
CLSPN Phosphorylation S720 2.698 2.613 _SLS(ph)SDSTLLLFK_
CLSPN Phosphorylation S810 -0.895 -0.754 _SPS(ph)PGLFR_
CLSPN Phosphorylation S833 -1.011 _LSEPS(ph)LPIEDSQDLYNASPEPK_
CLSPN Phosphorylation S846 -1.298 -0.477 _LSEPSLPIEDSQDLYNAS(ph)PEPK_
CLSPN Phosphorylation S950 -0.457 0.474 _FTS(ph)QDASTPASSELNK_
CLSPN Phosphorylation S968 -1.527 _ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_
CLSPN Phosphorylation S969 -1.527 _ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_
CLSPN Phosphorylation S1156 0.322 _NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR_
CLSPN Phosphorylation S1289 -0.296 0.054 _NFVFHTLS(ph)PVKAEAAK_
FANCD2 Ubiquitylation K77 -0.288 _TGESQNQLAVDQIAFQK(gl)K_
FANCD2 Ubiquitylation K137 0.364 _LQDEEASMGASYSKSLIK(gl)_
FANCD2 Ubiquitylation K322 -0.535 _LQASQVK(gl)LK_
FANCD2 Ubiquitylation K324 -0.384 _LQASQVKLK(gl)_
FANCD2 Ubiquitylation K561 2.102 3.950 _K(gl)QLSSTVFKYK_
FANCD2 Phosphorylation S592 1.311 1.350 _SES(ph)PSLTQER_
FANCD2 Phosphorylation S717 2.435 3.130 _DGGPVTS(ph)QESGQK_
FANCD2 Phosphorylation S1401 -0.015 _S(ph)QNSQESTADESEDDMSSQASK_
FANCD2 Phosphorylation S1404 -0.348 _S(ph)QNSQESTADESEDDMSSQASK_
FANCD2 Phosphorylation S1412 -1.471 _SQNSQESTADES(ph)EDDM(ox)SSQASK_
FBXW11 Ubiquitylation K466 0.325 _IVSGAYDGKIK(gl)_
MCM2 Phosphorylation S4 0.060 -0.102 _(ac)AES(ph)SESFTM(ox)ASS(ph)PAQR_
MCM2 Phosphorylation S5 0.653 0.313 _(ac)AESS(ph)ESFTMASSPAQR_
MCM2 Phosphorylation T9 0.528 0.894 _(ac)AESSESFT(ph)MASSPAQR_
MCM2 Phosphorylation S12 0.027 0.508 _AESSESFTMAS(ph)SPAQR_
MCM2 Phosphorylation S13 0.595 0.841 _(ac)AESSESFTMASS(ph)PAQR_
MCM2 Phosphorylation S26 0.334 0.204 _GNDPLTS(ph)SPGR_
MCM2 Phosphorylation S27 0.076 0.378 _GNDPLTSS(ph)PGR_
MCM2 Phosphorylation S40 0.648 1.028 _TDALTS(ph)SPGR_
MCM2 Phosphorylation S41 0.613 0.869 _RTDALTSS(ph)PGR_
MCM2 Phosphorylation T106 2.035 2.162 _AIPELDAYEAEGLALDDEDVEELT(ph)ASQR_
MCM2 Phosphorylation S108 1.832 2.212 _AIPELDAYEAEGLALDDEDVEELTAS(ph)QR_
MCM2 Phosphorylation S139 0.404 0.482 _GLLYDS(ph)DEEDEERPAR_
MCM2 Ubiquitylation K205 0.225 0.747 _ISDMCK(gl)ENR_
MCM2 Ubiquitylation K365 -0.341 0.407 _IQESPGK(gl)VAAGR_
MCM2 Ubiquitylation K450 0.216 0.470 _MITSLSK(gl)DQQIGEK_
MCM2 Ubiquitylation K946 -0.032 _FSHDLK(gl)R_
MCM7 Ubiquitylation K4 -1.164 _(ac)ALK(gl)DYALEKEK_
MCM7 Ubiquitylation K10 -0.334 -1.453 _(ac)ALKDYALEK(gl)EK_
MCM7 Ubiquitylation K12 -1.492 _DYALEK(gl)EK_
MCM7 Ubiquitylation K28 -0.102 -0.861 _FLQEFYQDDELGK(gl)K_
MCM7 Ubiquitylation K29 -1.023 -0.094 _FLQEFYQDDELGKK(gl)QFK_
MCM7 Ubiquitylation K32 0.146 -0.970 _QFK(gl)YGNQLVR_
MCM7 Ubiquitylation K89 -1.906 -1.328 _LFADAVQELLPQYK(gl)ER_
MCM7 Phosphorylation S121 0.902 0.509 _S(ph)PQNQYPAELMR_
MCM7 Ubiquitylation K145 -2.703 _RFELYFQGPSSNK(gl)PR_
MCM7 Ubiquitylation K159 0.038 -0.495 _ADSVGK(gl)LVTVR_
MCM7 Ubiquitylation K231 -0.965 _FIK(gl)FQEMK_
MCM7 Ubiquitylation K236 -1.769 _FQEMK(gl)MQEHSDQVPVGNIPR_
MCM7 Ubiquitylation K352 -1.468 _LAASIAPEIYGHEDVKK(gl)_
MCM7 Ubiquitylation K557 -2.556 -2.098 _QPPSQFEPLDMK(gl)LMR_
MCM7 Ubiquitylation K596 -0.751 -0.539 _REAWASK(gl)DATYTSAR_
MCM7 Ubiquitylation K627 -0.965 -0.588 _MVDVVEK(gl)EDVNEAIR_
MCM7 Ubiquitylation K641 -0.836 -0.945 _LMEMSK(gl)DSLLGDKGQTAR_
MCM7 Ubiquitylation K648 -0.422 -0.441 _DSLLGDK(gl)GQTAR_
MDM2 Phosphorylation S166 0.576 1.068 _AIS(ph)ETEENSDELSGER_
MDM2 Ubiquitylation K334 -0.872 _ENWLPEDK(gl)GK_
MDM2 Ubiquitylation K336 -0.872 _ENWLPEDK(gl)GK_
MDM2 Ubiquitylation K363 0.883 _LENSTQAEEGFDVPDCK(gl)K_
MDM2 Ubiquitylation K364 0.883 _LENSTQAEEGFDVPDCK(gl)K_
MDM2 Ubiquitylation K473 0.806 _NK(gl)PCPVCR_
NBN Phosphorylation T335 -1.121 _T(ph)TTPGPSLSQGVSVDEK_
NBN Phosphorylation S341 3.085 _TTTPGPS(ph)LSQGVSVDEK_
NBN Phosphorylation S343 3.710 3.629 _TTTPGPSLS(ph)QGVSVDEK_
NBN Phosphorylation S397 2.719 1.458 _MLS(ph)QDAPTVK_
NBN Phosphorylation S432 -0.192 -0.395 _IPNYQLS(ph)PTK_
NBN Phosphorylation T434 -0.188 -0.683 _IPNYQLSPT(ph)KLPSINK_
NBN Phosphorylation S615 1.985 4.691 _IS(ph)QENEIGKK_
PLK1 Ubiquitylation K358 -2.258 _EK(gl)EEPVVR_
PLK1 Ubiquitylation K574 1.656 _LSLLEEYGCCK(gl)ELASR_
PPP2CA Ubiquitylation K4 -0.788 -0.378 _(ac)MDDK(gl)AFTK_
PPP2CA Ubiquitylation K4 -0.450 -0.016 _(ac)M(ox)DEK(gl)VFTK_
PPP2CA Ubiquitylation K8 -0.522 _VFTK(gl)ELDQWIEQLNECK_
PPP2CA Ubiquitylation K21 -1.370 _ELDQWVEQLNECK(gl)QLNENQVR_
PPP2CA Ubiquitylation K21 -1.106 _ELDQWIEQLNECK(gl)QLSESQVK_
PPP2CA Ubiquitylation K29 0.211 0.122 _QLSESQVK(gl)SLCEK_
PPP2CA Ubiquitylation K36 -0.455 0.187 _AK(gl)EILTK_
PPP2CA Ubiquitylation K36 -0.455 0.187 _AK(gl)EILTK_
PPP2CA Ubiquitylation K41 -0.049 0.003 _EILTK(gl)ESNVQEVR_
PPP2CA Ubiquitylation K74 -0.316 -0.316 _IGGK(gl)SPDTNYLFMGDYVDR_
PPP2R1A Ubiquitylation K34 0.304 _K(gl)LSTIALALGVER_
PPP2R1A Ubiquitylation K107 0.584 0.441 _DK(gl)AVESLR_
PPP2R1A Ubiquitylation K163 0.106 0.149 _VSSAVK(gl)AELR_
PPP2R1A Ubiquitylation K175 -0.351 _ASNAVK(gl)AEIR_
PPP2R1A Ubiquitylation K188 0.395 0.130 _AAASK(gl)LGEFAK_
PPP2R1A Ubiquitylation K255 0.301 0.202 _QAAEDK(gl)SWR_
PPP2R1A Ubiquitylation K266 0.464 0.338 _YMVADK(gl)FTELQK_
PPP2R1A Ubiquitylation K284 -0.575 _FSELQK(gl)AMGPK_
PPP2R1A Ubiquitylation K307 0.224 0.500 _VK(gl)EFCENLSADCR_
PPP2R1A Ubiquitylation K467 0.890 _EAATSNLK(gl)K_
PPP2R1A Ubiquitylation K468 0.890 _EAATSNLK(gl)K_
PPP2R1A Ubiquitylation K542 -0.187 _FNVAK(gl)SLQK_
PPP2R1B Ubiquitylation K175 -0.351 _ASNAVK(gl)AEIR_
PPP2R1B Ubiquitylation K284 -0.575 _FSELQK(gl)AMGPK_
RAD1 Ubiquitylation K46 0.748 _EHATCFATK(gl)NGIK_
RAD51 Ubiquitylation K64 -1.228 _KELINIK(gl)GISEAK_
RAD9A Phosphorylation S277 -0.249 -0.052 _DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER_
RFC3 Ubiquitylation K66 -1.522 _ELYGVGVEK(gl)LR_
RFC3 Ubiquitylation K80 -1.498 -2.261 _IEHQTITTPSKK(gl)_
RFC3 Ubiquitylation K154 -1.667 -0.110 _TMEK(gl)YMSTCR_
RFC3 Ubiquitylation K170 -1.470 -0.431 _LILCCNSTSK(gl)VIPPIR_
RFC3 Ubiquitylation K202 -0.332 -0.849 _K(gl)EGLNLPSQLAHR_
RFC3 Ubiquitylation K225 -0.218 _K(gl)ALLMCEACR_
RFC4 Ubiquitylation K205 0.306 _FKPLSDK(gl)IQQQR_
RFC4 Ubiquitylation K217 -0.818 _LLDIAKK(gl)_
RFC4 Ubiquitylation K240 0.204 _K(gl)AITFLQSATR_
RFC5 Ubiquitylation K16 0.039 -0.820 _QQEQPAATK(gl)IR_
RFC5 Ubiquitylation K270 0.495 _NITELK(gl)TLK_
RPA1 Ubiquitylation K163 2.827 4.085 _AYGASK(gl)TFGK_
RPA1 Ubiquitylation K167 3.009 3.243 _TFGK(gl)AAGPSLSHTSGGTQSK_
RPA1 Ubiquitylation K183 0.925 _AAGPSLSHTSGGTQSK(gl)VVPIASLTPYQSK_
RPA1 Ubiquitylation K263 -1.803 _GTLK(gl)IANK_
RPA1 Ubiquitylation K267 2.751 _IANK(gl)QFTAVK_
RPA1 Ubiquitylation K331 3.112 4.066 _SYEDATK(gl)ITVR_
RPA1 Ubiquitylation K410 2.458 _SLSVLSSSTIIANPDIPEAYK(gl)LR_
RPA1 Ubiquitylation K489 0.465 2.335 _K(gl)VIDQQNGLYR_
RPA1 Ubiquitylation K588 -0.055 _IK(gl)ATVMDVKPVDYR_
RPA1 Ubiquitylation K595 1.201 _ATVMDVK(gl)PVDYR_
RPA2 Ubiquitylation K85 0.693 _HAEK(gl)APTNIVYK_
RPA2 Ubiquitylation K235 1.339 _NQLK(gl)HMSVSSIK_
TIMELESS Ubiquitylation K528 -0.868 _GNLVVQNK(gl)QK_
TIMELESS Ubiquitylation K530 -0.868 _GNLVVQNK(gl)QK_
TIMELESS Phosphorylation S1087 0.076 -0.254 _LS(ph)PTQLR_
TIMELESS Phosphorylation S1149 1.556 1.776 _KAGLAS(ph)PEEEDAVGKEPLK_
TIMELESS Phosphorylation S1173 0.502 _RQLLDS(ph)DEEQEEDEGR_
TIPIN Ubiquitylation K141 0.882 _EVQTCLK(gl)R_
TIPIN Phosphorylation S222 1.642 _LLSNS(ph)QTLGNDMLMNTPR_
TIPIN Phosphorylation T224 2.069 _LLSNSQT(ph)LGNDMLMNTPR_
TOPBP1 Ubiquitylation K789 -0.950 _FQSK(gl)AFR_
TOPBP1 Phosphorylation S888 2.918 1.917 _NAVALSAS(ph)PQLK_
YWHAB Ubiquitylation K11 1.057 1.322 _(ac)TMDKSELVQK(gl)AK_
YWHAB Ubiquitylation K13 0.060 0.388 _AK(gl)LAEQAER_
YWHAB Ubiquitylation K70 0.558 -0.175 _VISSIEQK(gl)TER_
YWHAB Ubiquitylation K140 0.531 _YLSEVASGDNK(gl)QTTVSNSQQAYQEAFEISKK_
YWHAB Ubiquitylation K159 0.300 _QTTVSNSQQAYQEAFEISK(gl)K_
YWHAB Ubiquitylation K160 -0.439 -0.371 _K(gl)EMQPTHPIR_
YWHAZ Ubiquitylation K3 0.268 0.388 _(ac)MDK(gl)NELVQK_
YWHAZ Ubiquitylation K9 0.917 0.954 _(ac)MDKNELVQK(gl)AK_
YWHAZ Ubiquitylation K11 0.016 0.388 _AK(gl)LAEQAERYDDMAACMK_
YWHAZ Ubiquitylation K49 0.656 1.019 _NLLSVAYK(gl)NVVGAR_
YWHAZ Ubiquitylation K68 0.504 _VVSSIEQK(gl)TEGAEK_
YWHAZ Ubiquitylation K74 0.762 _VVSSIEQKTEGAEK(gl)K_
YWHAZ Ubiquitylation K85 -0.089 _EK(gl)IETELR_
YWHAZ Ubiquitylation K122 0.498 0.837 _MK(gl)GDYYR_
YWHAZ Ubiquitylation K138 0.560 1.003 _YLAEVAAGDDK(gl)K_
YWHAZ Ubiquitylation K139 0.551 1.003 _YLAEVAAGDDKK(gl)_
YWHAZ Ubiquitylation K166 -0.439 -0.371 _K(gl)EMQPTHPIR_


© Copyright Svejstrup Laboratory 2015