bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: TIPIN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TIPIN 1 2.951 0.660 -0.190

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TIPIN Phosphorylation T224 2.069 _LLSNSQT(ph)LGNDMLMNTPR_
TIPIN Phosphorylation S222 1.642 _LLSNS(ph)QTLGNDMLMNTPR_
TIPIN Ubiquitylation K141 0.882 _EVQTCLK(gl)R_

Background Information for TIPIN:


Pubmed-TIPIN »
Uniprot-TIPIN »
Biogrid-TIPIN »
ProteomicsDB-TIPIN »

Tumorportal-TIPIN »
COSMIC-TIPIN »
GenomeRNAi-TIPIN »
Genecards-TIPIN


Protein-protein Interactions for TIPIN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CLSPN Cat. description Hein, Mann, Cell 2015
Category members IP bait TIMELESS Cat. description Hein, Mann, Cell 2015
Category members IP bait TIPIN Cat. description Hein, Mann, Cell 2015
Category members IP bait GINS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TIPIN
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring TIPIN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TIPIN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006974 cellular response to DNA damage stimulus Database 3.57
Category members Pathway Pathway_865 PID_ATR_PATHWAY 0 3.46
Category members GO Category GO:0007067 mitosis Database 2.23
Category members GO Category GO:0000077 DNA damage checkpoint Database 2.04
Category members GO Category GO:0031573 intra-S DNA damage checkpoint Database 1.18
Category members GO Category GO:0009411 response to UV Database 0.79
Category members GO Category GO:0007049 cell cycle Database 0.69
Category members GO Category GO:0000790 nuclear chromatin Database 0.46
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0033262 regulation of nuclear cell cycle DNA replication Database 0.08
Category members GO Category GO:0000076 DNA replication checkpoint Database 0
Category members GO Category GO:0008284 positive regulation of cell proliferation Database 0
Category members GO Category GO:0044770 cell cycle phase transition Database 0
Category members GO Category GO:0048478 replication fork protection Database 0


.

© Copyright Svejstrup Laboratory 2015