bioLOGIC-db

bioLOGIC Data

Query: CLSPN

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
CLSPN	2	5.140	0.600	-0.710		-0.324	0.360		-0.207

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
CLSPN	Phosphorylation	S720	2.698	2.613	_SLS(ph)SDSTLLLFK_
CLSPN	Phosphorylation	S260	2.501	2.218	_KEPSLESGVHS(ph)FEEGSELSK_
CLSPN	Phosphorylation	S950	-0.457	0.474	_FTS(ph)QDASTPASSELNK_
CLSPN	Phosphorylation	S1156		0.322	_NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR_
CLSPN	Phosphorylation	S1289	-0.296	0.054	_NFVFHTLS(ph)PVKAEAAK_
CLSPN	Phosphorylation	S846	-1.298	-0.477	_LSEPSLPIEDSQDLYNAS(ph)PEPK_
CLSPN	Phosphorylation	S810	-0.895	-0.754	_SPS(ph)PGLFR_
CLSPN	Phosphorylation	S833		-1.011	_LSEPS(ph)LPIEDSQDLYNASPEPK_
CLSPN	Phosphorylation	S968		-1.527	_ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_
CLSPN	Phosphorylation	S969		-1.527	_ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_

ProteomicsDB-CLSPN »

Protein-protein Interactions for CLSPN

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait CDCA8	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CENPH	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CLSPN	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GJB2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait LTN1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MAD2L1BP	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MPP1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MYH7	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB5B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TIMELESS	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TIPIN	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GINS3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in CLSPN

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring CLSPN

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring CLSPN

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0006281	DNA repair	Database	INF
Category members	DDR Literature	pubmedid:TBD1_UV_decreased	Elia et al, 2015 UV decreased acetylation events	Elia et al.	10.54
Category members	DDR Literature	pubmedid:19647519	Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation		3.6
Category members	Pathway	Pathway_865	PID_ATR_PATHWAY	0	3.46
Category members	GO Category	GO:0006260	DNA replication	Database	3.34
Category members	GO Category	GO:0006921	cellular component disassembly involved in execution phase of apoptosis	Database	2.98
Category members	GO Category	GO:0006915	apoptotic process	Database	2.12
Category members	GO Category	GO:0000077	DNA damage checkpoint	Database	2.04
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	GO Category	GO:0018105	peptidyl-serine phosphorylation	Database	0.18
Category members	Pathway	Pathway_1028	PID_PLK1_PATHWAY	0	0.16
Category members	GO Category	GO:0033314	mitotic DNA replication checkpoint	Database	0.08
Category members	GO Category	GO:0010997	anaphase-promoting complex binding	Database	0.04
Category members	GO Category	GO:0031572	G2 DNA damage checkpoint	Database	0
Category members	GO Category	GO:0032147	activation of protein kinase activity	Database	0