RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PRKDC	3	1.430	-1.280	-0.994	-0.672	-0.244	0.307	0.443
GSK3B	2	1.020	-0.870				-1.128	1.091
CLSPN	2	0.600	-0.710		-0.324	0.360		-0.207
MYO3A	2	-1.560	3.110
MAPK14	2	-0.160	-0.350
MORC3	2	-0.280	-0.100	0.309			0.499	0.162
PLK1	2			3.098	-0.387	0.212	-1.949	-0.610
CAMK2B	1	1.200	-0.790
CAMK2B	1	1.200	-0.790		-0.654	0.073
CAMK2B	1	1.200	-0.790	-0.619			0.544	0.125
CAMK2B	1	1.200	-0.790				0.559	1.698
SMG1	1	-0.880	0.740	1.025			-0.011	-0.624
SMG1	1	-0.040	-0.310	1.025			-0.011	-0.624
ILK	1	-1.560	3.680				-0.463	-0.527
ATR	1	-1.040	0.920	0.671			1.041	0.708
PKD1	0	-0.900	0.980
CLK1	0	-0.740	1.390				0.612	0.032
HIPK2	0	-0.990	0.680
PRKCZ	0	-0.290	0.310
PDK3	0	-1.460	2.420	-0.904	-0.805	-0.382	-0.511	-0.045
PRKACA	0	0.380	-0.680		-1.005	-0.697	0.234	0.487
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240				-0.235	-0.851
PRKD2	0	0.050	0.170	0.914
PRKD2	0	0.050	0.170
TGFBR1	0	-0.260	0.020
NEK6	0	0.580	-1.160
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
CAMK2D	0	-0.260	0.500		-0.654	0.073
CAMK2D	0	-0.260	0.500	-0.619			0.544	0.125
CAMK2D	0	-0.260	0.500
TLK2	0	-0.170	-0.340		0.092
TAF1	0						0.381	0.385
ATM	0						0.398	0.474
UHMK1	0	-1.130	2.350
DYRK1A	0	-1.360	2.390
CDK5	0	-1.100	1.740	-0.236			1.063	0.312
BCL2	0	0.910	-0.740
ADRBK1	0	-0.390	0.360
ADRBK1	0	-0.340	0.480
TNKS	0	0.420	0.660
BRSK2	0	1.070	-0.640
PAK2	0	-0.760	1.040
GAS6	0	0.020	0.220		-1.517	-0.502
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
LRRK2	0	0.530	-0.620	-0.240
MTOR	0	-0.680	0.150	0.757			0.074	0.101

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADRBK1	Phosphorylation	S670	1.038	0.924	_NKPRS(ph)PVVELSK_
ADRBK1	Phosphorylation	S676		1.113	_NKPRSPVVELS(ph)K_
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
ATM	Ubiquitylation	K307		-0.196	_GAYESTK(gl)WR_
ATM	Ubiquitylation	K331		-0.126	_GK(gl)YSSGFR_
ATM	Ubiquitylation	K385		-0.669	_ESSDYSVPCK(gl)R_
ATM	Ubiquitylation	K1101		-0.548	_LFQDTK(gl)GDSSR_
ATM	Ubiquitylation	K1109		-1.666	_LLK(gl)ALPLK_
ATM	Ubiquitylation	K1698		-1.026	_DASYTK(gl)ALK_
ATM	Ubiquitylation	K1738		-0.137	_SAAVTCLK(gl)NILATK_
ATM	Ubiquitylation	K2025		-1.497	_SIGEPDSLYGCGGGK(gl)MLQPITR_
ATR	Ubiquitylation	K32		-0.929	_ELGSATPEEYNTVVQK(gl)PR_
ATR	Phosphorylation	S435	0.516	0.284	_RLS(ph)SSLNPSK_
ATR	Ubiquitylation	K746		-1.823	_NLK(gl)ATSQHECSSSQLK_
ATR	Ubiquitylation	K1019	1.662		_TLGK(gl)QLNVNRR_
ATR	Ubiquitylation	K1600	-0.437		_FQALK(gl)AEK_
ATR	Ubiquitylation	K2106		-0.136	_AYEWEK(gl)AGR_
ATR	Ubiquitylation	K2604	0.657	1.118	_LQGVIK(gl)TR_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
BRSK2	Phosphorylation	S294		0.075	_SLPS(ph)LEDIDPDVLDSMHSLGCFR_
BRSK2	Phosphorylation	S382	0.812	-1.070	_S(ph)MEVLSVTDGGSPVPAR_
BRSK2	Phosphorylation	S393	-0.463	-1.217	_S(ph)M(ox)EVLSVTDGGS(ph)PVPAR_
BRSK2	Phosphorylation	S423	-0.553	-0.633	_SISGASSGLSTS(ph)PLSSPR_
BRSK2	Phosphorylation	S489	-0.354	-0.198	_NSFLGS(ph)PR_
CAMK2B	Ubiquitylation	K147		-1.064	_DLKPENLLLASK(gl)CK_
CAMK2B	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2D	Ubiquitylation	K251	-0.437		_DLINK(gl)MLTINPAK_
CAMK2D	Phosphorylation	S330	0.412	0.370	_KPDGVKES(ph)TESSNTTIEDEDVK_
CAMK2D	Phosphorylation	T331		-0.174	_KPDGVKES(ph)TESSNTTIEDEDVK_
CAMK2D	Phosphorylation	T336	0.615	0.376	_ESTESSNT(ph)TIEDEDVK_
CAMK2D	Phosphorylation	T337	0.450		_ESTESSNTT(ph)IEDEDVK_
CDK5	Ubiquitylation	K56	0.606	0.237	_EICLLK(gl)ELK_
CLSPN	Phosphorylation	S260	2.501	2.218	_KEPSLESGVHS(ph)FEEGSELSK_
CLSPN	Phosphorylation	S720	2.698	2.613	_SLS(ph)SDSTLLLFK_
CLSPN	Phosphorylation	S810	-0.895	-0.754	_SPS(ph)PGLFR_
CLSPN	Phosphorylation	S833		-1.011	_LSEPS(ph)LPIEDSQDLYNASPEPK_
CLSPN	Phosphorylation	S846	-1.298	-0.477	_LSEPSLPIEDSQDLYNAS(ph)PEPK_
CLSPN	Phosphorylation	S950	-0.457	0.474	_FTS(ph)QDASTPASSELNK_
CLSPN	Phosphorylation	S968		-1.527	_ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_
CLSPN	Phosphorylation	S969		-1.527	_ES(ph)SMGDPMEEALALCSGSFPTDKEEEDEEEEFGDFR_
CLSPN	Phosphorylation	S1156		0.322	_NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR_
CLSPN	Phosphorylation	S1289	-0.296	0.054	_NFVFHTLS(ph)PVKAEAAK_
DYRK1A	Ubiquitylation	K11	-0.236		_(ac)MHTGGETSACK(gl)PSSVR_
DYRK1A	Phosphorylation	Y321	0.876	0.924	_IYQY(ph)IQSR_
GSK3B	Phosphorylation	S9	-0.483	0.010	_TTS(ph)FAESCKPVQQPSAFGSMK_
GSK3B	Ubiquitylation	K85		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Ubiquitylation	K86		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Phosphorylation	S215	0.296	0.477	_GEPNVS(ph)YICSR_
GSK3B	Phosphorylation	Y216	0.356	0.376	_GEPNVSY(ph)ICSR_
GSK3B	Phosphorylation	T390	2.800	2.527	_IQAAAST(ph)PTNATAASDANTGDR_
HIPK2	Ubiquitylation	K492		-0.060	_YISQTQGLPAEYLLSAGTK(gl)TTR_
HIPK2	Ubiquitylation	K614		-0.350	_SCFQNMEICK(gl)R_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
MAPK14	Phosphorylation	S2	3.221	3.623	_(ac)S(ph)QERPTFYR_
MAPK14	Phosphorylation	T180	0.958	1.087	_HTDDEM(ox)T(ph)GYVATR_
MAPK14	Phosphorylation	Y182	1.388	1.374	_HTDDEM(ox)TGY(ph)VATR_
MAPK14	Ubiquitylation	K249	0.073	-1.380	_LVGTPGAELLKK(gl)_
MORC3	Phosphorylation	S514		0.420	_HLS(ph)EGTNSYATR_
MORC3	Ubiquitylation	K555	-1.251		_SSILNAK(gl)NRR_
MORC3	Phosphorylation	S560	2.304	1.301	_RLS(ph)SQFENSVYK_
MORC3	Ubiquitylation	K785	0.929		_K(gl)QCSALQHVK_
MORC3	Ubiquitylation	K825	0.523	0.398	_QLDK(gl)CSIERDQYK_
MORC3	Ubiquitylation	K844	0.024		_SEVELLEMEK(gl)SQIR_
MORC3	Ubiquitylation	K855		1.663	_SQCEELK(gl)TEVEQLK_
MORC3	Ubiquitylation	K891	0.406		_STNQQTATDVSTSSNIEESVNHMDGESLK(gl)LR_
MTOR	Ubiquitylation	K309	-0.762	0.065	_DLMGFGTK(gl)PR_
MTOR	Ubiquitylation	K1257	-1.167	-0.901	_SGQGDALASGPVETGPMKK(gl)_
MTOR	Ubiquitylation	K1395		-1.255	_AYAK(gl)ALHYK_
MTOR	Ubiquitylation	K2066		-1.004	_GPQTLK(gl)ETSFNQAYGR_
MTOR	Ubiquitylation	K2166		-1.304	_IQSIAPSLQVITSK(gl)QRPR_
MTOR	Phosphorylation	T2471		0.329	_KT(ph)GTTVPESIHSFIGDGLVKPEALNK_
MYO3A	Ubiquitylation	K399	2.702		_LYIGSK(gl)R_
NEK6	Ubiquitylation	K277	-1.179	-0.174	_IEQCDYPPLPGEHYSEK(gl)LR_
PAK2	Phosphorylation	S2	-1.228	-0.902	_(ac)S(ph)DNGELEDKPPAPPVR_
PAK2	Ubiquitylation	K136	1.213		_FYDSNTVK(gl)QK_
PAK2	Phosphorylation	S141	-0.294	-0.321	_YLS(ph)FTPPEK_
PAK2	Ubiquitylation	K370	-0.565		_DIK(gl)SDNVLLGMEGSVK_
PKD1	Phosphorylation	T867		0.841	_GT(ph)YHVRLEVNNTVSGAAAQADVR_
PLK1	Ubiquitylation	K358	-2.258		_EK(gl)EEPVVR_
PLK1	Ubiquitylation	K574	1.656		_LSLLEEYGCCK(gl)ELASR_
PRKACA	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACA	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PRKCZ	Phosphorylation	T560	-0.884	-1.578	_KQALPPFQPQITDDYGLDNFDTQFTSEPVQLT(ph)PDDEDAIKR_
PRKD1	Phosphorylation	S207	0.941	1.048	_RLS(ph)NVSLTGVSTIR_
PRKD1	Phosphorylation	T219	-0.068	-0.162	_T(ph)SSAELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S221	-0.662	-0.500	_TSS(ph)AELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S225	-0.970	-0.919	_TSSAELSTS(ph)APDEPLLSPVSPGFEQK_
PRKD1	Phosphorylation	S236		-0.132	_TSSAELSTSAPDEPLLSPVS(ph)PGFEQK_
PRKD1	Phosphorylation	S251	0.474	0.751	_SNS(ph)QSYIGRPIHLDK_
PRKD1	Phosphorylation	S399	0.023	0.162	_TIS(ph)PSTSNNIPLMR_
PRKD1	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD1	Phosphorylation	S744	-0.226	-0.287	_S(ph)VVGTPAYLAPEVLR_
PRKD2	Phosphorylation	S197	0.239	0.895	_RLS(ph)STSLASGHSVR_
PRKD2	Phosphorylation	T211		-0.119	_LGT(ph)SESLPCTAEELSR_
PRKD2	Phosphorylation	S212		0.113	_LGTS(ph)ESLPCTAEELSR_
PRKD2	Phosphorylation	S214	0.216	0.302	_LGTSES(ph)LPCTAEELSR_
PRKD2	Phosphorylation	S710	-0.413	-0.511	_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Phosphorylation	T714	-0.279		_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD2	Phosphorylation	S886	-0.718	-0.305	_DLGGACPPQDHDMQGLAERIS(ph)VL_
PRKDC	Ubiquitylation	K108	0.568	-0.049	_IAPYSVEIK(gl)NTCTSVYTK_
PRKDC	Ubiquitylation	K117	0.540	0.376	_NTCTSVYTK(gl)DR_
PRKDC	Ubiquitylation	K163		0.679	_FYGELALK(gl)K_
PRKDC	Ubiquitylation	K164	-0.371		_FYGELALKK(gl)_
PRKDC	Ubiquitylation	K263	0.272	-0.659	_AIRPQIDLK(gl)R_
PRKDC	Ubiquitylation	K357		1.479	_NVDSNNK(gl)ELSIAIR_
PRKDC	Ubiquitylation	K374		-0.342	_GYGLFAGPCK(gl)VINAK_
PRKDC	Ubiquitylation	K493		-0.582	_ICSK(gl)PVVLPK_
PRKDC	Ubiquitylation	K689		-0.187	_YFEGVSPK(gl)SLK_
PRKDC	Ubiquitylation	K810	0.561	0.360	_TSALSDETK(gl)NNWEVSALSR_
PRKDC	Ubiquitylation	K828	0.723	-0.203	_GFNK(gl)VVLK_
PRKDC	Ubiquitylation	K832	1.611	-0.278	_VVLK(gl)HLK_
PRKDC	Ubiquitylation	K838	1.939	1.087	_TK(gl)NLSSNEAISLEEIR_
PRKDC	Ubiquitylation	K963		-1.201	_ATQMPEGGQGAPPMYQLYK(gl)R_
PRKDC	Ubiquitylation	K1038		0.646	_EFLK(gl)WSIK_
PRKDC	Ubiquitylation	K1042	-0.070	-0.432	_WSIK(gl)QITPQQQEK_
PRKDC	Ubiquitylation	K1051		-1.153	_QITPQQQEK(gl)SPVNTK_
PRKDC	Ubiquitylation	K1057		-0.693	_SPVNTK(gl)SLFK_
PRKDC	Ubiquitylation	K1334		0.108	_YNYSK(gl)CTVVVR_
PRKDC	Ubiquitylation	K1407		-0.971	_ALK(gl)MSPYK_
PRKDC	Ubiquitylation	K1456	0.657	-0.495	_LAAVVSACK(gl)QLHR_
PRKDC	Ubiquitylation	K1744		-0.269	_FNNYVDCMK(gl)K_
PRKDC	Ubiquitylation	K1857		-0.152	_FTK(gl)LNESTFDTQITK_
PRKDC	Ubiquitylation	K1869	0.803		_LNESTFDTQITK(gl)K_
PRKDC	Ubiquitylation	K1870	0.843	-0.566	_LNESTFDTQITKK(gl)_
PRKDC	Ubiquitylation	K1892	-1.132	-1.666	_LPKDDVHAK(gl)ESK_
PRKDC	Ubiquitylation	K2418		-0.499	_SK(gl)DFVQVMR_
PRKDC	Ubiquitylation	K2447	-0.500	-1.069	_LK(gl)PVELR_
PRKDC	Phosphorylation	S2612	-0.226	1.740	_STVLTPMFVETQAS(ph)QGTLQTR_
PRKDC	Phosphorylation	T2671	-0.097		_SSFDWLTGSSTDPLVDHT(ph)SPSSDSLLFAHK_
PRKDC	Phosphorylation	S2672		0.083	_SSFDWLTGSSTDPLVDHTS(ph)PSSDSLLFAHK_
PRKDC	Phosphorylation	S2675		-0.193	_SSFDWLTGSSTDPLVDHTSPSS(ph)DSLLFAHK_
PRKDC	Phosphorylation	S2677	0.284	-0.009	_SSFDWLTGSSTDPLVDHTSPSSDS(ph)LLFAHK_
PRKDC	Ubiquitylation	K2694		-1.865	_APLK(gl)SVGPDFGKK_
PRKDC	Ubiquitylation	K2703	0.600		_SVGPDFGKK(gl)_
PRKDC	Ubiquitylation	K2715	0.258	-1.356	_LGLPGDEVDNK(gl)VK_
PRKDC	Ubiquitylation	K2717		-1.795	_LGLPGDEVDNKVK(gl)GAAGR_
PRKDC	Ubiquitylation	K2738	-0.251	-0.421	_DQEK(gl)LSLMYAR_
PRKDC	Ubiquitylation	K2758	-0.370		_EKEIK(gl)SELK_
PRKDC	Ubiquitylation	K2764	0.293	-0.445	_MK(gl)QDAQVVLYR_
PRKDC	Ubiquitylation	K2829		-1.122	_TLSEK(gl)NNITQK_
PRKDC	Ubiquitylation	K2908	-0.765	-1.790	_LLPAELPAK(gl)R_
PRKDC	Ubiquitylation	K2928	0.416	-0.319	_WVELAK(gl)LYR_
PRKDC	Ubiquitylation	K3158	0.005	-1.352	_QGNLSSQVPLK(gl)R_
PRKDC	Ubiquitylation	K3192	-0.192		_CFFLSK(gl)IEEK_
PRKDC	Phosphorylation	S3205	2.096	1.572	_LTPLPEDNS(ph)M(ox)NVDQDGDPSDR_
PRKDC	Ubiquitylation	K3235	0.810	0.153	_SCK(gl)FSMK_
PRKDC	Ubiquitylation	K3241	0.107	-0.523	_MK(gl)MIDSAR_
PRKDC	Ubiquitylation	K3248	0.977	-0.289	_K(gl)QNNFSLAMK_
PRKDC	Ubiquitylation	K3260	0.018	-1.258	_LLK(gl)ELHK_
PRKDC	Ubiquitylation	K3455	0.488	-0.615	_ALK(gl)LNSNEAR_
PRKDC	Ubiquitylation	K3552	1.164	0.277	_NK(gl)EFVAR_
PRKDC	Ubiquitylation	K3608	1.045	1.399	_NIEK(gl)MYER_
PRKDC	Ubiquitylation	K3631		-1.002	_K(gl)FIQTFGK_
PRKDC	Ubiquitylation	K3650	0.475	-0.515	_GGSK(gl)LLR_
PRKDC	Ubiquitylation	K3710	0.119	-0.965	_GK(gl)PLPEYHVR_
PRKDC	Ubiquitylation	K3877	0.018	-2.000	_ESK(gl)VPADLLKR_
PRKDC	Ubiquitylation	K3884	-0.255	-1.203	_VPADLLK(gl)R_
PRKDC	Ubiquitylation	K4019		-0.937	_NFEQK(gl)MLK_
PRKDC	Ubiquitylation	K4023		-0.481	_K(gl)GGSWIQEINVAEK_
SMG1	Phosphorylation	T3574	2.128		_NLATSADT(ph)PPSTVPGTGK_
STK4	Ubiquitylation	K176		-0.350	_DIK(gl)AGNILLNTEGHAK_
STK4	Ubiquitylation	K205	-0.223	-0.386	_LADFGVAGQLTDTMAK(gl)R_
STK4	Phosphorylation	S320	0.555	0.552	_EVDQDDEENS(ph)EEDEMDSGTM(ox)VR_
STK4	Phosphorylation	S344	0.573	0.366	_EMDQDDEENS(ph)EEDEMDSGTMVR_
TAF1	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TGFBR1	Ubiquitylation	K449	-0.991		_VVCEQK(gl)LRPNIPNR_
TGFBR1	Ubiquitylation	K502	0.553	0.430	_TLSQLSQQEGIK(gl)M_
TLK2	Phosphorylation	T98		0.262	_ISDYFEFAGGSAPGT(ph)SPGR_
TLK2	Phosphorylation	S99	0.267	-0.122	_ISDYFEFAGGSAPGTS(ph)PGR_
TNKS	Ubiquitylation	K667	-0.766	-0.164	_AGDLETVK(gl)QLCSSQNVNCR_
TNKS	Ubiquitylation	K762		-1.426	_GK(gl)YEICK_
TNKS	Ubiquitylation	K771		-1.280	_LLLK(gl)HGADPTKK_
TNKS	Ubiquitylation	K812	-0.176	-1.693	_GDAALLDAAK(gl)K_
TNKS	Ubiquitylation	K813	-0.176	-1.693	_GDAALLDAAK(gl)K_
TNKS	Ubiquitylation	K1081		-0.151	_LIK(gl)GVER_
UHMK1	Ubiquitylation	K383		0.050	_GQVFVEYANAGDSK(gl)AAQK_