RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ENO1	1	0.800	-0.580	-0.879	2.255	-2.013	0.739	0.221
PAPOLA	1	-1.510	2.810
EXOSC3	1	-1.840	3.020	-0.152	-0.472	-0.227	-0.542	-0.121
DCPS	1	-2.150	3.770
PAPD7	1	-1.470	2.960
PAPOLG	1	-0.580	0.790
EXOSC8	1	-2.330	4.300	0.175
LSM7	1	-2.240	3.880
PNPT1	1	-1.420	2.630		1.469	-0.694	0.280	0.483
WDR61	1			1.215	0.540	1.786	-0.848	1.112
CNOT8	1	-1.460	2.820
LSM3	1	-1.730	3.210				-1.212	-1.020
SKIV2L	1	-1.520	3.780				-0.001	-0.057
EDC4	0	1.140	-0.850	1.220			0.146	0.040
SKIV2L2	0	-0.700	0.990
SKIV2L2	0	-0.700	0.990	-0.408	-1.067	-0.153	-0.849	-0.141
EXOSC7	0	0.320	0.360	0.498	-0.198	0.040	0.896	-0.129
EXOSC5	0	-1.260	2.170
EXOSC5	0	-1.260	2.170				0.148	0.414
CNOT4	0	0.000	-0.080
DIS3	0	0.150	-0.690
DIS3	0	0.150	-0.690	-0.335			-0.438	-0.111
XRN2	0	1.050	-0.930	-2.506	-1.121	-0.161	-0.293	-0.304
LSM5	0	-1.270	1.430				-1.385
CNOT2	0	-1.010	0.910
CNOT2	0	-0.480	-0.280
HSPA9	0	-0.110	-0.790	0.452	0.066	-0.024	0.697	0.588
XRN1	0	1.680	-1.120
XRN1	0	1.680	-1.120	-0.304			-0.943	0.164
EXOSC9	0			0.080	0.519	0.128	-0.495	0.107
CNOT1	0			0.579	-0.249		-0.264	-0.019
LSM4	0	0.040	-0.030				-0.414	-0.767
EXOSC2	0	-0.410	0.130	-0.167	0.162	0.416	-0.803	0.148
MPHOSPH6	0	-0.590	0.210				-0.494	0.236
PARN	0	-1.190	1.560		0.653	-0.013	-0.219	0.283
HSPD1	0	1.020	-0.650	1.151	0.719	-0.757
RQCD1	0	0.120	0.260				-0.119	-0.091
RQCD1	0	0.120	0.260
DCP1B	0	0.790	-0.010
PATL1	0	1.310	-0.500
EXOSC1	0	-1.320	2.040	-0.540			-0.773	-0.524
EXOSC10	0	0.160	-0.170		-0.327	-0.108	-0.734	-0.003
LSM2	0	-0.870	1.440		-1.120	-0.268	0.415
EDC3	0	-0.320	1.230
CNOT10	0	0.550	-0.140
CNOT10	0	0.550	-0.140				-0.512	0.364
TTC37	0	-0.440	-0.170	0.004			0.095	-0.201
CNOT7	0	0.480	-0.730	-0.386
CNOT7	0	0.480	-0.730
PAPOLB	0	-1.500	2.280
EXOSC6	0	1.090	-0.810	-0.397			-1.242	-0.177

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CNOT1	Phosphorylation	S1061	0.555	0.326	_TVTVTRPTGVS(ph)FKK_
CNOT1	Ubiquitylation	K1064	-0.495		_TVTVTRPTGVSFKK(gl)_
CNOT1	Ubiquitylation	K1708	0.686		_AYGSPWCNK(gl)QITR_
CNOT1	Ubiquitylation	K2185	-0.010	0.228	_DLDSYLK(gl)TR_
CNOT10	Ubiquitylation	K472	-1.155		_GTSEQETK(gl)GLPSKK_
CNOT2	Phosphorylation	S80	-0.345	0.395	_TNSMSSSGLGS(ph)PNR_
CNOT4	Phosphorylation	S2	-0.674	-1.015	_(ac)S(ph)RSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
CNOT4	Phosphorylation	S4	-0.674	-0.627	_S(ph)PDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICR_
CNOT7	Ubiquitylation	K200	-1.098	-0.157	_YLMK(gl)SCK_
CNOT8	Ubiquitylation	K200	-1.098	-0.157	_YLMK(gl)SCK_
CNOT8	Ubiquitylation	K269	-0.696	-0.445	_LYGLGTGVAQK(gl)QNEDVDSAQEK_
DCP1B	Ubiquitylation	K12		-0.338	_(ac)AAVAAGGLVGK(gl)GR_
DCP1B	Phosphorylation	S275	0.605	0.416	_SLS(ph)YEEPR_
DCP1B	Phosphorylation	S511	-0.866	-0.621	_TPNTEQQTPLFQVIS(ph)PQR_
DCPS	Ubiquitylation	K128		1.390	_QLNDVK(gl)TTVVYPATEK_
DCPS	Ubiquitylation	K138	0.752		_TTVVYPATEK(gl)HLQK_
DIS3	Ubiquitylation	K337	-0.491		_TAVSEK(gl)MLKPTGR_
DIS3	Ubiquitylation	K535	-0.201		_RGTTVYLCEK(gl)R_
EDC3	Phosphorylation	S131	0.233	0.276	_SQDVAVS(ph)PQQQQCSK_
EDC3	Phosphorylation	S161	0.603	0.607	_HNS(ph)WSSSSR_
EDC4	Phosphorylation	S6	0.694	0.508	_(ac)ASCAS(ph)IDIEDATQHLR_
EDC4	Ubiquitylation	K111	0.746		_EVEIVASSDSSISSK(gl)AR_
EDC4	Phosphorylation	S723	-0.821	-0.217	_GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSR_
EDC4	Phosphorylation	S725	-0.736	-0.860	_GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSR_
EDC4	Phosphorylation	T727	0.284	0.193	_T(ph)RSPDVISSASTALSQDIPEIASEALSR_
EDC4	Phosphorylation	S729	-0.039	0.192	_S(ph)PDVISSASTALSQDIPEIASEALSR_
EDC4	Phosphorylation	S734	0.095		_TRS(ph)PDVIS(ph)SASTALSQDIPEIASEALSR_
EDC4	Phosphorylation	S741	0.242	1.055	_T(ph)RSPDVISSASTALS(ph)QDIPEIASEALSR_
EDC4	Phosphorylation	S780		-0.253	_GFGSSAPEGLEPDSMASAASALHLLS(ph)PRPR_
EDC4	Phosphorylation	S844	-0.222	0.517	_ETCSTLAES(ph)PR_
EDC4	Phosphorylation	S879	0.781	0.805	_DSQDASAEQS(ph)DHDDEVASLASASGGFGTK_
ENO1	Ubiquitylation	K5	0.389	0.802	_(ac)SILK(gl)IHAR_
ENO1	Ubiquitylation	K60	0.769	1.153	_YMGK(gl)GVSK_
ENO1	Ubiquitylation	K64	0.708	0.799	_GVSK(gl)AVEHINK_
ENO1	Ubiquitylation	K71	0.221	0.294	_AVEHINK(gl)TIAPALVSK_
ENO1	Ubiquitylation	K80	0.008		_TIAPALVSK(gl)K_
ENO1	Ubiquitylation	K81	0.220	0.476	_K(gl)LNVTEQEKIDK_
ENO1	Ubiquitylation	K89	1.139		_KLNVTEQEK(gl)IDK_
ENO1	Ubiquitylation	K126	-0.530	0.435	_AGAVEK(gl)GVPLYR_
ENO1	Ubiquitylation	K193		1.145	_IGAEVYHNLK(gl)NVIK_
ENO1	Ubiquitylation	K197	1.066	1.367	_IGAEVYHNLKNVIK(gl)_
ENO1	Ubiquitylation	K199	0.592	0.434	_NVIKEK(gl)YGK_
ENO1	Ubiquitylation	K202	-0.137	0.899	_YGK(gl)DATNVGDEGGFAPNILENK_
ENO1	Ubiquitylation	K233	0.597		_TAIGK(gl)AGYTDK_
ENO1	Ubiquitylation	K256	-0.004	-0.216	_SGK(gl)YDLDFKSPDDPSR_
ENO1	Ubiquitylation	K262	-1.294	-0.324	_SGKYDLDFK(gl)SPDDPSR_
ENO1	Phosphorylation	S272	0.075	0.358	_YIS(ph)PDQLADLYK_
ENO1	Ubiquitylation	K326	-0.383		_FTASAGIQVVGDDLTVTNPK(gl)R_
ENO1	Ubiquitylation	K330	1.093		_RIAK(gl)AVNEK_
ENO1	Ubiquitylation	K335	0.564	0.437	_AVNEK(gl)SCNCLLLK_
ENO1	Ubiquitylation	K406	0.892	0.279	_LAK(gl)YNQLLR_
ENO1	Phosphorylation	S419	0.673	0.511	_IEEELGS(ph)KAK_
ENO1	Ubiquitylation	K420	0.442	0.409	_IEEELGSK(gl)AK_
ENO1	Ubiquitylation	K422		0.439	_IEEELGSKAK(gl)_
ENO1	Ubiquitylation	K434		-0.324	_NFRNPLAK(gl)_
EXOSC10	Ubiquitylation	K591		-1.148	_SEVAAGVK(gl)K_
EXOSC10	Ubiquitylation	K592		-1.148	_SEVAAGVK(gl)K_
EXOSC10	Ubiquitylation	K680		-1.926	_GPLTVAQKK(gl)_
EXOSC10	Ubiquitylation	K710		-1.867	_APVSQAAK(gl)FDPSTK_
EXOSC10	Ubiquitylation	K716		-2.215	_FDPSTK(gl)IYEISNR_
EXOSC2	Ubiquitylation	K70		-0.209	_LICVK(gl)ALK_
EXOSC2	Ubiquitylation	K97		0.060	_WK(gl)VETNSR_
EXOSC2	Phosphorylation	S175	-0.346	-0.185	_LGQGVLVQVS(ph)PSLVK_
EXOSC2	Ubiquitylation	K180		-0.618	_LGQGVLVQVSPSLVK(gl)R_
EXOSC5	Ubiquitylation	K68	-1.576		_VSK(gl)EIFNK_
EXOSC5	Ubiquitylation	K92	-1.386	0.381	_IGLPGVAEK(gl)SR_
EXOSC5	Ubiquitylation	K191	-0.124		_K(gl)LLMSSTK_
EXOSC8	Ubiquitylation	K6	-0.039	-1.840	_(ac)AAGFK(gl)TVEPLEYYRR_
EXOSC8	Ubiquitylation	K19	0.825		_FLK(gl)ENCRPDGR_
EXOSC9	Ubiquitylation	K52	0.195		_ISFGTDYGCCIVELGK(gl)TR_
EXOSC9	Phosphorylation	S306	0.254	0.180	_APIDTS(ph)DVEEK_
HSPA9	Ubiquitylation	K368	-0.622	-0.734	_TIAPCQK(gl)AMQDAEVSK_
HSPD1	Phosphorylation	S70	0.210	0.487	_TVIIEQSWGS(ph)PK_
HSPD1	Ubiquitylation	K82	-0.300		_DGVTVAK(gl)SIDLK_
HSPD1	Ubiquitylation	K87	-0.005	0.292	_SIDLK(gl)DKYK_
HSPD1	Ubiquitylation	K130		-0.428	_EGFEK(gl)ISK_
HSPD1	Ubiquitylation	K233	0.853	0.024	_GYISPYFINTSK(gl)GQK_
HSPD1	Ubiquitylation	K292	0.339		_LK(gl)VGLQVVAVK_
LSM4	Ubiquitylation	K52	-1.562		_DGDK(gl)FWR_
LSM4	Ubiquitylation	K67	-0.211	0.950	_GSTIK(gl)YLR_
LSM7	Ubiquitylation	K17	-0.496		_ESILDLSK(gl)YIDK_
LSM7	Ubiquitylation	K26	-0.221	-0.411	_VK(gl)FQGGR_
MPHOSPH6	Ubiquitylation	K128	0.193		_RYETLVGTIGKK(gl)_
MPHOSPH6	Phosphorylation	T147	0.548	-0.219	_RDHANYEEDENGDIT(ph)PIK_
PAPD7	Ubiquitylation	K198		-0.310	_NFNYLK(gl)TGIR_
PAPOLA	Phosphorylation	T39	-0.241	0.026	_HYGIT(ph)SPISLAAPK_
PAPOLA	Phosphorylation	S40	0.114	1.106	_HYGITS(ph)PISLAAPK_
PAPOLA	Ubiquitylation	K160		-0.269	_LQEEVK(gl)DLR_
PAPOLA	Phosphorylation	S553		0.479	_LTALNDSSLDLSM(ox)DSDNSM(ox)SVPS(ph)PTSATK_
PAPOLB	Ubiquitylation	K160		-0.269	_LQEEVK(gl)DLR_
PAPOLG	Phosphorylation	S525		1.185	_RLS(ph)LDSSCLDSSR_
PAPOLG	Phosphorylation	S599	-0.230	-0.471	_TVS(ph)PPTVCTIPTVVGR_
PAPOLG	Phosphorylation	S648		0.316	_SHS(ph)PSIDGTPK_
PAPOLG	Phosphorylation	S708	2.392	-0.153	_RLPS(ph)KELPDSSSPVPANNIR_
PARN	Phosphorylation	S557	0.812	0.283	_NNS(ph)FTAPSTVGK_
PARN	Phosphorylation	S619	0.501	0.675	_KELS(ph)PAGSISK_
PATL1	Phosphorylation	T178		-0.080	_RST(ph)SPIIGSPPVR_
PATL1	Phosphorylation	S179	-0.148	-0.186	_RSTS(ph)PIIGSPPVR_
PATL1	Phosphorylation	S184	-0.543	-0.522	_STS(ph)PIIGS(ph)PPVR_
RQCD1	Ubiquitylation	K44		1.040	_ENALLELSK(gl)K_
RQCD1	Ubiquitylation	K45	-0.182		_ENALLELSKK(gl)R_
SKIV2L	Phosphorylation	S245	-0.192	0.456	_GDTVSAS(ph)PCSAPLAR_
SKIV2L	Phosphorylation	S255	0.352	0.534	_AS(ph)SLEDLVLK_
SKIV2L	Phosphorylation	S256	0.435	0.585	_ASS(ph)LEDLVLK_
SKIV2L	Ubiquitylation	K369		-0.901	_ALSNQK(gl)FR_
SKIV2L	Ubiquitylation	K526		-0.595	_GYYAAVEAKK(gl)_
SKIV2L	Ubiquitylation	K720		-0.315	_GLDPTGTVILLCK(gl)GR_
SKIV2L	Ubiquitylation	K791	0.355	-0.629	_AHEQALAELTK(gl)R_
SKIV2L	Ubiquitylation	K1075		-0.404	_TLGYVDEAGTVK(gl)LAGR_
SKIV2L2	Ubiquitylation	K192		0.854	_VIFTSPIK(gl)ALSNQK_
SKIV2L2	Ubiquitylation	K198		0.245	_ALSNQK(gl)YR_
SKIV2L2	Ubiquitylation	K768	1.102	-0.687	_SIQEVQK(gl)R_
SKIV2L2	Ubiquitylation	K796	-0.319		_VIQK(gl)VEAFEHR_
SKIV2L2	Ubiquitylation	K852		0.044	_TVLQMDELK(gl)CR_
SKIV2L2	Ubiquitylation	K873		0.279	_LGFATSSDVIEMK(gl)GR_
TTC37	Ubiquitylation	K362	0.322		_AEALIK(gl)LSDYDSSEEAIR_
TTC37	Ubiquitylation	K399		-0.016	_NK(gl)GSFDEAAK_
TTC37	Ubiquitylation	K441		0.579	_DYLQAEK(gl)CFQR_
TTC37	Ubiquitylation	K619		0.691	_GGYTTALK(gl)SFTK_
TTC37	Ubiquitylation	K1180	-0.503		_SVAVQK(gl)QISK_
TTC37	Ubiquitylation	K1184		-0.135	_SVAVQKQISK(gl)_
TTC37	Ubiquitylation	K1354	-0.410	0.095	_ISEAETLCTKNLK(gl)_
TTC37	Ubiquitylation	K1425		-0.892	_K(gl)SLQLASQR_
TTC37	Ubiquitylation	K1516		-0.391	_VVYQPGYPK(gl)SIASTAR_
WDR61	Ubiquitylation	K139	0.495		_VNIFGVESGK(gl)K_
WDR61	Ubiquitylation	K140	0.390		_VNIFGVESGKK(gl)_
XRN1	Phosphorylation	S814		-0.523	_ENEVQSSHHGEPPSEEHLS(ph)PQSFAM(ox)K_
XRN2	Ubiquitylation	K132		0.183	_EGMEAAVEK(gl)QR_
XRN2	Phosphorylation	T439	-0.332	-1.539	_RDQPAFTPSGILT(ph)PHALGSR_
XRN2	Phosphorylation	S448	0.425	0.037	_NS(ph)PGSQVASNPR_
XRN2	Phosphorylation	S473	0.104	-0.751	_MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK_
XRN2	Phosphorylation	S475		0.436	_MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK_
XRN2	Ubiquitylation	K493	-1.223		_MQNNSSPSISPNTSFTSDGSPSPLGGIK(gl)R_
XRN2	Phosphorylation	S499	-1.444		_AEDS(ph)DSEPEPEDNVR_
XRN2	Ubiquitylation	K533	0.431		_NKFDVDAADEK(gl)FR_